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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ANAC46
------>
ZmHOX2a(2)
<---------
ANAC58
<------
ZmHOX2a(2)
<---------
ANAC58
---------->
DOF2
--------->
ARR11(3)
<-----------------------
TaNAC69(2)
====================================
HOX2a_HOX2a
---------->
DOF2
---------->
DOF2
------>
ZmHOX2a(1)
<---------
ARR14(2)
--------->
TOE2(3)
=============================
HOX2a_HOX2a
--------->
ARR14(2)
----------->
GT1
==========================
HOX2a_HOX2a
<---------
ARR11(3)
--------->
ANAC58
<------
ZmHOX2a(2)
=====================================
HOX2a_HOX2a
--------->
HSFB2a(2)
<---------
REM1(1)
<-----------
GT1
---------->
DOF2
-
YAB1
--------->
ANAC58
<---------------------
WRI1
------>
ZmHOX2a(1)
---------->
DOF2
aatttgcag
aacgtaaaagccgtgtttgatgaagcgatcaaagtagttttacatcctccttcaaagactaagaagcgaaagagaaagatcggtttatgcc
18437700
--------->
ZAT18
------
<---------
ZAT18
<---------
ARR11(3)
<---------
ZAT14
<-----------
GT1
<---------
GLK1(2)
--------->
ZAT14
<---------
AtMYB61
--------->
ARR11(3)
<---------
ZAT6
<----------
DOF2
--------->
ARR14(2)
--------->
WRKY45
<---------
ANAC58
<---------
ARR14(2)
<----------
DOF2
<---------
ANAC58
<----------
DOF2
<------
ZmHOX2a(1)
<------
atgttctttga
ctagtgtactcaagtctctggctttggtttgttttacatcttttttagtgtgtttcttctatgaaggactcttgcagattttagtatga
18437800
------>
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
YAB1
--------->
WOX13(1)
--->
ATHB12
---------->
DOF2
--------->
GLK1(2)
--------->
ARR14(2)
-----------
---
YAB1
<---------
YAB1
<---------
GLK1(2)
<---------
ARR14(2)
---------->
DOF2
-
ttagctatcttcgttataaaagtttgatcttgtagtagagattcttgtaacagaattataagcgaattctcgtctatca
gtctatgtaaaagaacaatgt
18437900
<----------
DOF2
<----------
DOF2
<-----------
GT1
--------->
GLK1(2)
-----
->
CBF
---------->
DOF2
<----------
ID1
<---------
GLK1(2)
<------
--------->
ID1
----------->
RAV1(1)
---------->
DOF2
<------------
CBF
--------->
AHL20(2)
ttgtcttctttgagttcaagagacaacaacaaagaaccgttttagcgcaaaaagaaacaaaataaaccgattgaaacagaatcgaagaataaataaaccg
18438000
------------>
CBF
--------->
TOE2(3)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
ATHB12
--------->
ARR14(2)
--------->
AHL20(2)
<---------
ARR14(2)
<---------
AHL20(2)
--------->
ANAC46
------------>
CBF
<
---->
LBD16
------->
GAMYB
--------->
WOX13(1)
-
---
LBD16
--------->
MYB52(1)
<---------
AHL20(2)
<----------
DOF2
<
ggttttgttttttggctaataaccgaaaccgaaatagaataaatcaataaaatctcaattctctagtcttctcctttaaactagagtcg
atgtctagctc
18438100
<-----------
HVH21
<------
NtERF2
<---------
ATHB12
<---------
MYB52(1)
<---------
MYB55(2)
<---------
RAP2.6(3)
--------->
MYB46(3)
<-----------
HVH21
------>
MYB83
------>
NtERF2
<---------
MYB111(1)
<-----------
TGA1
--------->
LBD16
------>
MYB46(1)
--------->
DEAR3(1)
--------->
DEAR3(1)
------->
GAMYB
--------->
RAP2.3(3)
--------->
AtMYB61
<---------
MYB111(2)
<------
NtERF2
--------->
DEAR3(1)
-------->
P
--------->
ATERF1(1)
<---------
ALFIN1
--------->
MYB46(3)
<---------
ATERF1(1)
--------->
DEAR3(2)
<---------
MYB55(2)
<------
NtERF2
<
--------->
MYB46(3)
--------->
MYB46(3)
--------->
At4g35610
-
<---------
MYB55(2)
--------->
AtMYB61
--------->
At4g35610
<
------->
TEIL
------>
MYB83
<-----------
TGA1
<---------
At4g35610
<---------
ICU4
------->
GAMYB
--------->
DEAR3(2)
<---------
At4g35610
<-----------
HVH21
<---------
ATHB12
---------
MYB52(2)
------>
MYB46(1)
<------
NtERF2
--------->
ANAC46
--------->
ICU4
-------->
MYB46(3)
--------->
ORA47(1)
<---------
At4g35610
--------->
RAP2.3(1)
--------->
GLK1(1)
---------
MYB55(2)
--------->
DEAR3(1)
--------->
At4g35610
--------->
DEAR3(1)
<---------
GLK1(1)
caacgaaccaccgcgaaaaaccgaccaaccatcgtcgtcatcggcatcggcatcggcatcgccgtcattgtttttgtcactgccactggaaatcatttcg
18438200
<---------
ZAT2
<-----------
HVH21
--------->
ZAT2
<------
NtERF2
<---------
At4g35610
-
--------->
LBD16
--------->
At4g35610
--------->
ANAC58
<---------
LBD16
------>
ZmHOX2a(1)
--------->
ANAC58
------>
ZmHOX2a(2)
<---------
ARR14(2)
----------->
RAV1(2)
<
---------
ARR11(3)
--------->
ARR14(2)
<---------
ZAT18
<-----------
GT1
-------->
ARR11(3)
<-----------
GT1
--------->
LBD16
--------->
ANAC58
<--
-----------
ARR10
<---------
ARR11(3)
<---------
LBD16
--------->
ANAC58
---
atgatcttagcccgcgtcccaaaacgatattacccaatcctctgctccgtctccaagaacatgcggagtcttgttcgctcgcctgaaattcacaaggctc
18438300
--------->
ICU4
--------->
GLK1(2)
---------->
DOF2
<---------
ARR14(2)
--------->
LBD16
<---------
LBD16
--------->
RAP2.6(3)
--------->
ARR14(2)
<---------
LBD16
<----------
DOF2
<---------
ARR14(2)
--------->
LBD16
<---------
ALFIN1
---
----->
ZmHOX2a(2)
--------->
ARR14(2)
<---------
ANAC46
<---------
ZAT18
<------
---------
ICU4
<---------
GLK1(2)
<----------
DOF2
<------
NtERF2
--------->
ZAT14
-------
-------
ARR11(3)
--------->
ZAT6
<-----------
GT1
<---------
ZAT14
<-------
------>
ARR11(3)
<---------
ARR11(3)
<---------
ICU4
--------->
ZAT18
<---------
HSFB2a(2)
gatctttactcggaaaagattatctctatatcggcttcatcgacgaaaattatcgccccgtatacgactactggtacactctccggagaatcgagaacag
18438400
=================
------>
ZmHOX2a(2)
==================
--------->
AGP1
<---------
ARR14(3)
--------->
ARR11(3)
<---------
ARR14(2)
<------
MYB46(1)
<---------
MYB46(3)
<------
MYB83
--
<---------
DEAR3(2)
<-
<---------
AtMYB61
--
<---------
MYB52(1)
<-
--------->
GLK1(2)
<---------
ANAC58
<-------
GAMYB
<------
ZmHOX2a(2)
<---------
GLK1(2)
<---------
MYB52(1)
--------->
ANAC58
<---------
ARR11(3)
------>
SPL7
--------->
ARR14(2)
<---------
ANAC58
--------->
ANAC46
--------->
ARR14(2)
---------
AtSPL3
<---------
ARR14(2)
------>
ZmHOX2a(1)
--------->
ANAC58
--------->
ARR14(3)
-->
ZAT6
<-----------
ARR10
<---------
DAG2
------->
TEIL
<-----------
ARR10
--
--
ZAT14
<---------
ARR14(2)
<---------
GLK1(1)
<---------
AtLEC2
----------->
ARR10
<--
tacgaccgagaatctcttcgaatccattgagttcccttatccttccgagcctaatcgattttccatgaacgccgttggtccaaagatcttcttcatttca
18438500
--------->
REM1(1)
<-----------
HVH21
=========================
HOX2a_HOX2a
<---------
ANAC46
------>
ZmHOX2a(1)
<---------
ANAC58
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
<---------
ANAC58
--------------->
AtSPL8
<---------
At4g35610
=================
HOX2a_HOX2a
<---------
ARR14(2)
--------->
ARR11(3)
=================
HOX2a_HOX2a
--------->
ARR14(2)
--------->
ANAC58
------->
GLK1(2)
<-----------------
AGL1
--------->
ANAC58
<
--------
ARR11(3)
----------->
HVH21
<-------
GAMYB
<-----
------->
ARR11(3)
------>
ZmHOX2a(2)
--------->
At4g35610
<---------
ZAT14
<-----
--------
ARR14(2)
<---------
ARR11(3)
<---------
GLK1(1)
<---------
ANAC58
<-----
------->
ARR14(2)
--------->
ARR11(3)
--------->
ALFIN1
<---------
ANAC58
<-------
TEIL
=
-------
GLK1(2)
<---------
ICU4
<----------
DOF2
<---------
LBD16
<------
ZmHOX2a(1)
--------->
ZAT18
gaatcttgtactccttcatcaagactttcgatctttgacacccgatttggggagttgcgtcaaggaccttgtttgctagtgaagcgagggtacaattgcg
18438600
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Next
AGI:
At2g44690.1
Description:
ARAC9/AtROP8/ROP8 (rho-related protein from plants 8); GTP binding. Identical to Rac-like GTP-binding protein ARAC9 precursor (ARAC9) [Arabidopsis Thaliana] (GB:Q9XGU0;GB:O80508); similar to ARAC3/ATROP6/RHO1PS/ROP6 (rho-related protein from plants 6), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT4G35020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70494.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); cont
Range:
from: 18436339
to: 18437879
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At2g44700.1
Description:
kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At2g44700 [Arabidopsis Thaliana] (GB:Q84RE1;GB:O80509); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT2G44630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71765.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043)
Range:
from: 18438090
to: 18439196
Orientation: Forward
Links:
TAIR
MIPS
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