Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                            <--------                                                                                            ---------                                                                                     ---------->DOF2                                                                               --------->ANAC58                                                                               =================bZIP_DOF                      --------->AHL20(2)                                       --------->ANAC55(2)                      --------->AHL20(1)                                       --------->ANAC58     <---------------AGL15   <-----------GT1                                   --------->ANAC46   <---------At4g35610<---------AHL20(2)                                       <---------ANAC55(2)   --------->At4g35610<---------AHL20(1)                                       --------->ANAC55(1) -----GT1          --------->YAB1                                              <---------TGA1a >AGL3            <---------YAB1                                               --------->TGA1a  -----   tagtctgctaatattagtctataataaattttcacttgtttgtttaaaatgtctatacatactctgttttaatcaaaccgcacgtaacaaagaatatatc  18312900                                                             <------NtERF2                                                             --------->ALFIN1                                                           <---------ANAC46                                                           <---------TGA1a                                                           <---------ANAC58                                                           <---------ANAC58                                                           <---------O2                                                           <---------bZIP60(2)                                    --------->ZAT18        --------->O2                              ------->TEIL              --------->ALFIN1                        --------->TOE1(2)           <---------At4g35610                       --------->ZAT2               --------->ZAT2                       <---------ZAT2               <---------ZAT14                      --------->ANAC58          <-----------HVH21                      --------->ANAC46         <---------bZIP60(1)                                 <-   ------------------------>ANAC81  <---------ZAT18 --------->At4g35610                           --- >AHL20(1)            --------->ANAC58         --------->TGA2(1)                                  --- -ARR11(3)            ------>MYB83--------->ANAC46  <---------ZAT2                                --- >ARR11(3)            ------>MYB46(1)          <---------TGA2(1)                                  --- ------>GT1 ----------->GT1<---------MYB52(2)  --------->bZIP60(1)--------->MYB52(1)             ----   gtaaaatgcaagagaggtaaaaccaagctacgaaccagggcacttagtgatgtcagcagtggcgtggcaaacagaaggaagagcgagagcgagagagacg  18313000                            ------>ZmHOX2a(1)                       --------->KAN4(2)                      <---------HSFB2a(1)                      --------->KAN4(1)                      <---------KAN4(1)                      --------->HSFB2a(1)                                                     =======                      <---------ICU4                                                          -------  <---------LBD16    <------ZmHOX2a(2)                                 <-----------GT1 <------NtERF2 --------WRKY18(1)   ==============HOX2a_HOX2a                         --------->ARR11(3)  ---------- ------>WRKY45      --------->ARR11(3)                              --------->YAB1    --------->LBD16 ------>WRKY12      <---------ARR11(3)        ---------->DOF2      --------->AHL20(2) <------NtERF2 ------>WRKY38(1)  <------ZmHOX2a(1)    <---------YAB1             <---------AHL20(2)<---------DEAR3(1) -------->HVH21<---------ATHB12        <---------ARR11(3)         --------->ICU4    <---------LBD16 ----->DOF5.7(2)--------->YAB1         --------->ARR11(3)    --------->ETT(1)      ------>NtERF2   ttgacctggagacccaaatcaggatcattcctctcttggatgatcatacaaagacacttcatgtcggaattaataacttgtttgaggccggagcaacagt  18313100                                                                   --------->ZAT14                                                                   --------->SPL7                                                                   <---------ZAT14                                                                   <---------ZAT18                                                                <---------ANAC46                                         <-------MYC3           --------->DEAR3(1)                                         ------->MYC3          --------------->AtSPL8         <---------ARR11(3)             <---------O2           --------------->AtSPL3      <------NtERF2                     --------->O2        <---------ABI4(2)    <---------ANAC46       --------->ANAC55(2)           <---------ZAT2    <---------DEAR3(1)     <---------ANAC55(2)           <---------At4g35610                        <   --------->ATERF1(1)     --------->ANAC55(1)           --------->At4g35610                        <   <------NtERF2           --------->ANAC46          ------>MYB83<---------SPL7                     -  <-----------HVH21        --------->ANAC58          ------>MYB46(1)                                - <---------ANAC58    <---------ANAC58   ======================MYC_MYB                              <- <---------TGA1a<---------DAG2 --------->ANAC58      -------->P<------NtERF2                    <---- <---------DEAR3(1)  <---------ANAC58   <---------TGA1a  ----------->RAV1(2)                   <----- <---------ANAC58=================================bZIP_DOF <---------ATERF1(1)                 ------ ===========================bZIP_DOF    --------->ALFIN1 --------->ZAT2                 <----------DOF2 <---------ANAC46<----------DOF2 <------ZmHOX2a(1)  --------->ORA47(1)                  <---------DAG2 ==========MYC_MYB   --------------------->WRI1    --------->MYB46(3)             <----------DOF2 <-- >GAMYB  --------->ARR11(3)--------->ANAC58       --------->DEAR3(2)        <---------ANAC58   ------ ->RAV1(1)   <-----------GT1   --------->ANAC58<---------SPL7 ------>NtERF2 <---------ANAC58   <-----   ctggcgtcggagattttgcctttccttgcacgtaaggaagacatgtggccataccgaccagctgcgccgtacactcttccttgtctttccctttatcagc  18313200            <---------ALFIN1            --------->AtMYB61        --------->MYB46(3)    --------->ATERF1(1)    <------NtERF2   <---------RAP2.3(1)   --------->RAP2.6(2)   ------>NtERF2   <---------ATERF1(1)  <---------DEAR3(1)  --------->ATERF1(2)  <---------ATERF1(2) --------->ATERF1(1)           ---------->DOF2                    ----------->HVH21 ---------ATERF1(1)        <---------ICU4                         <---------MYB52(1) ---------RAP2.3(1)        <--------HAHB4                        --------->LBD16 -------->LBD16            --------->ATHB51                     <---------ANAC58 ----->NtERF2             --------->ICU4              --------->TOE2(3) --------DEAR3(1)     ------>NtERF2                   <----------DOF2 -----ARR14(2)       --------->RAP2.6(2)          <---------MYB52(1)         <---------YAB1 ----At4g35610      --------->MYB46(3)         <------NtERF2    <---------ANAC55(1) --->ZAT2  --------->MYB46(3)<---------YAB1   ------>NtERF2     --------->ANAC55(2)                <- -------LBD16----------->RAV1(1)             <---------ETT(2)   <---------ANAC58             <------- --->At4g35610 --------->AtMYB61             --------->ETT(2)   <---------ANAC55(2)   <---------YAB1 ----ZAT2--------->ANAC46 <---------YAB1  <-----------RAV1(1)   <---------ANAC46 <---------MYB46(3)--   tccggcggcatccaccaccatagccaccattattaaagctattgctgtcgccattactttaatcttccgtgactccattttgtttgttctgatttaagtt  18313300                                                                                                 <---                                                                                               ------                                                                                               ------                                                                                            <--------                                                                                            <--------                                                 <---------AHL20(2)                         <--------                                       <----------DOF2<------------CBF                      <--------                                    <-----------GT1 <---------YAB1                <---------ANAC58                            --------->YAB1       --------->AHL20(2)               <---------ANAC58 ----------GT1             *TSS--------->AHL20(2)--------->AHL20(1)               <---------AtLEC2 --TOE2(3)      ------>ZmHOX2a(1)  <-----------GT1  <---------AHL20(2)        <------------CBF------- ------->ZAT6  <---------MYB59 --------->ATHB51  <---------AHL20(1)  --------->GLK1(2) <------------CBF   ttcactaccatttgtttcctaactcatctagcattatttatctttttctaaaatattattgtatatgtaagtttctgtgaaattgcatgcattgccgtgt  18313400     <-------TEIL ------ETT(2) --->REM1(2)                   ----------->GT1 --->ZAT14                <------MYB83                                     <---------ARR11(3)       - -ANAC58                  <------MYB46(1)                                 <---------ICU4            < -ANAC46                 --------->MYB59                 <---------HSFB2a(2)                   <----- -ANAC58             <---------AHL20(2)                  --------->HSFB2a(2) <-----------GT1 -------- -ANAC55(1)         <---------AHL20(2)           ----------->GT1       <---------ICU4      <---------ATHB12 -->ALFIN1    <---------AHL20(2)               <-----------RAV1(2)    <---------YAB1  ---------------   agacaagttcatggatttattttttatttggtaatgaaaaattgtgagaacaggtgattctcgaatgtcaacatcattatctccattcgcccaatcggtt  18313500       <---------AHL20(2)       --------->AHL20(2)      --------->ICU4      <---------YAB1    <--------HAHB4                                               --------->ANAC58    --------->ATHB51                                             --------->ANAC58    -------->HAHB4                                           --------->ANAC58    <--------ATHB1                                           --------->ANAC58    --------->YAB1                                           <---------ANAC55(2)    <---------ICU4                                <---------AHL20(2)   --------->ICU4                                 --------->AHL20(2)   <---------ATHB51                              --------->AHL20(2)   --------->AHL20(2)                            <---------AHL20(2)                                --   <---------YAB1                      <---------AHL20(1)    --------->ANAC55(2)               ------ --------->YAB1                        <---------AHL20(2)   <-------TEIL                --------->KAN4(1) -------->AHL20(2)                  <---------AHL20(2)      --------->SPL7              <---------KAN4(1) ---------AHL20(2)                 --------->AHL20(2)   <---------------AtSPL3        <<<<<<<ZML2  <- ----MYB52(1)           <-----------GT1--------->AHL20(2) <---------MYB52(1)     <---------STY1(2)--- --->GT1              <---------AHL20(2)<---------AHL20(2)<---------SPL7         --------->STY1(2)<-- -->AGL1   --------->YAB1          <---------AHL20(2)   --------->MYB59     <-----------GT1   ------>ZmHOX2a(1)   aattaataattaataagagtatattttatcgagactattaattttttttaaaaaaatttcggtacgtaagtcattttttaactagctagaacaatcctcc  18313600  <---------MYB46(3) <---------YAB1 <---------WOX13(1) ------->ATHB12                                                                                  ---- ------>ATHB5                                                                                    <--- --------ICU4             <---------YAB1                                                  <---------MYB52(1) ------>ICU4           <-----------GT1                         --------->TOE2(3)     ------------>MYB.PH3(1) -------YAB1       <----------DOF2      ---------->DOF2    <---------AHL20(2)     --------->AHL20(2)   atgattgttgattccattcttcttttttctgatttgattttttaaagaaaatgtgagataataaatctcaaatatcaaaaaaaaaaaaatcagttatctc  18313700                                     --------->ANAC58          --------------->AGL15      --------->ANAC58          <---------------AGL15  <-----------GT1   --------->ANAC58           --------->YAB1   --------->ANAC58      <---------AHL20(2)   --------->ANAC46    <---------RVE1(1)                          <----------DOF2        <---------DAG2  <---------LBD16     <---------ARR11(3)                    ---------->DOF2              <----------DOF2 ----->HSFB2a(2)      <---------GLK1(2)                <----------DOF2              <-----------GT1 ------HSFB2a(2)      --------->ARR11(3)               <---------DAG2  <--------P<-----------GT1   cagacgcgcaatctgtttatagtagattttttttataacaaggcaaaagtttatcaactttataaagactttggtaagtcaattttcaaccctttttgtt  18313800  Previous    Next  AGI:  At2g44290.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3). similar to lipid transfer protein-related [Arabidopsis thaliana] (TAIR:AT2G44300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67175.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59826.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domai Range:  from: 18312277    to: 18313327    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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