Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->AHL20(2)                                 --------->ANAC58                                 --------->ANAC58                                 ----------->GT1                 <---------ARR11(3)                              --------->LBD16                    --------->ARR11(3)                             --------->RAP2.6(2)       <---------TOE2(3)     --------->DAG2       --------->ANAC58       <------ZmHOX2a(2)   ---------->DOF2        --------->ANAC58      --------->ARR11(3) ------->ANAC58           --------->ANAC46XXXXXXXXXXXXXXXXXXXX>MIR867                               < ------->ANAC58    --------->KAN4(2)   --------->AHL20(2)       <---------GLK1(1)            -------- ------>DOF2  --------->ICU4 --------->ANAC46   <---------ARR11(3)                  <---------AtMYB61   aaagcaaaaggttgcaatgtttattctcaagccgcaagtaaataaacacagatcattaagaaatcgatatctctctaaaacttgttgtggttttgcacca  18142700                                 <------ZmHOX2a(2)                                --------->ARR11(3)                                <---------ARR11(3)                            <---------------AGL15          ===============================HOX2a_HOX2a                          --------------->AGL15          ==============================HOX2a_HOX2a                 <---------MYB55(2)          <------ZmHOX2a(1)    --------->GLK1(1)                    --------->MYB46(3)      ---------->DOF2          <---------GLK1(1)                   -------->P----------------->AGL3 --------->ANAC58       <---------ARR14(2)                     --------->ANAC58 ------>MYB83   ------ ----------->GT1        --------->ARR14(2)      <---------ICU4 --------->ANAC58 ------>MYB46(1)<----- --------->ANAC58      <-----------HVH21   <-------TEIL      ---------->DOF2 ----------------->AGL2 -----------------------TaNAC69(2)------>ZmHOX2a(2)      --------->DAG2    --------->ZAT6      <----- --->RAV1(1)        <---------LBD16----------->HVH21    ---------->DOF2<---------MYB52(2)      ------   gagacgaaaaaaggacttcaagtccggttacagagatctcacagattcaattttgacataaagcaaagcaaccactaacaccaaatttagtactagcagc  18142800                                             --------->AHL20(2)                                             <---------AHL20(2)                                       ------>MYB83                                     --------->DEAR3(1)                                    <---------At4g35610                                    --------->At4g35610                              --------->ATHB12              <-----------------------TaNAC69(2)                             <---------YAB1  <---------AHL20(1)  <-------TEIL             --------->YAB1    --------->AHL20(1) --->At4g35610             <---------AtLEC2 --------->AHL20(2) ----ZAT2                 <-------TEIL ------>MYB46(1)     <---------ZAT14                          - ----At4g35610           --------->AtLEC2   --------->YAB1 --------->ZAT14 ---------->DOF2         <- --->ZAT2             <-------TEIL<-----------GT1        <---------------------WRI1 <---------WOX13(1)   tcgattcgtctcaaaatcgaaacatacatgcatgattcacctcccattatattacagacagtgaagagttcaagaaaaaaagcttgatagataccaaaat  18142900                                                                        ---------->DOF2                                                                --------->DEAR3(2)                                                                --------->ANAC58                                                            --------->ANAC58                                         --------------->AGL15  --------->ANAC58                                         <---------------AGL15 ------->TEIL                               ---------->DOF2              --------->ANAC58    --------->At4g35610     --------------->AGL15           <---------ANAC55(2) <---------At4g35610        =============================MADS_MADS     <---------WRKY12 --------->At4g35610        <---------------AGL15           --------->ANAC55(2)                ------ --------->ZAT2            <---------ANAC55(2)            <-----------GT1                   --------- <---------ZAT2          --------->AHL20(2)       ---------->DOF2--------->DEAR3(1)         --------- ---------->RAV1(1)--------->ANAC58     --------->ZAT6   <---------ARR14(2)              <------NtERF2 --------HSFB2a(2) --------->ANAC58   <-----------GT1    --------->ARR14(2)        --------->ALFIN1   tccagcagaagacttcatagaacgaaattacttaaaagagtaaccctacatagaaagaagttacgcaccgaagtcaaaggaaggggagggaggcacgaat  18143000                     --------->HSFB2a(2)       <---------ANAC46       <---------bZIP60(1)       <---------ANAC58       <---------O2  <---------HSFB2a(2)       <---------ANAC58 --------->ARR14(2)       <---------bZIP60(2) --------->TOE1(3)      <------NtERF2 <---------LBD16     <-----------HVH21  <---------ARR14(2)                                          <-----------GT1 <---------DEAR3(1)--------->MYB52(1)                                         *TSS--------->AHL20(2) ->TEIL--------->bZIP60(1) --------->TOE2(3)            ---------->DOF2   <-------TEIL            --- >ANAC58          <-----------GT1            --------->DAG2              --------->GLK1(2)        <-- >ANAC58 <------NtERF2--------->LBD16       ---------->DOF2   <------ZmHOX2a(1)   <---------AHL20(2)   cgctcggtgtcgtcgcaaaattaccggaaccctaaacccagagagaaaaagctcgcgagaaagaggaagagagagattcagaaattaaacaagtctgtat  18143100                                                       --------->ANAC46                                                    ------->TEIL                                                <---------KAN4(2)                        --------->YAB1      <---------ANAC55(2)                     <------------CBF       --------->ANAC55(2)                   <---------ARR11(3)      <---------LBD16                                  <--------                   <---------AHL20(1)    ----------->HVH21        <----------DOF2         ------>ZmHOX2a(1) ------>AHL20(2)   --------->ARR11(3)    ----------->TGA1<---------ARR14(2)             ----------->RAV1(2) -------AHL20(2)   --------->AHL20(1) <---------AHL20(2) --------->ARR14(2)    <-----------GT1   ttaattttggtttatttgcaaaatattgataagaccctattttatgacggaatgaacccgatactattctttttgtcaaaataacccatctcctgcatgt  18143200                                         <---------ANAC46                                        <---                                        <------NtERF2                                        <-------                                      <---------RAP2.3(2)                             ------>MYB46(1)                      <----------DOF2 <---------RAP2.6(2)                             ------>MYB83                <---------ANAC58      <---------DEAR3(1)                --------->TOE1(3)    <-------      ----------->HVH21     <---------WOX13(1) --------->MYB52(1)       --------->TOE2(3)    --------    <---------At4g35610   --------->ATHB12 <------NtERF2             <---------ALFIN1 --------->MYB52(1)    --------->At4g35610  <---------YAB1------>NtERF2    <---------AHL20(2)          <---------MYB59 -AtLEC2        <---------ANAC58      <---------RAP2.3(3)  <---------TOE2(3)        --------->AtMYB61   tttttgggctgacaaattgggtttcttttgattgattttgacggcgtagtaacagaaatttatggatagccacaccttagcttagaccaaacgtttaggt  18143300       <---------YAB1 ----TEIL   --------->DAG2                                                                   -------- --------AtSPL8                                             <---------YAB1              <---------YAB1 --TOE2(3) ---------->DOF2                               ------>ZmHOX2a(1)      <---------ATHB12 ->MYB59--------->YAB1                                   --------->ICU4      <---------AHL20(2)   acaaagagtatgataaagttgagaacttaagacaatgtcaagaacatcaaaaccatgtcctgatcatacattctcttgtttaatcaatgtattatagatt  18143400                                                                                               <-----                                                  ----------->HVH21                            <-----                                                --------->ANAC55(2)                          <-------                                                <---------ANAC58                            <-------GAMYB                                                <---------ANAC58           --------->YAB1  <------MYB83                                             <----------DOF2         --------->ANAC58      <------MYB46(1)                                          <---------ALFIN1           --------->ANAC58      <---------MYB46(3)                                       --------->ANAC46      --------->HSFC1(2)           <---------AtMYB61                             <-----------HVH21  <---------ANAC46   ---------->DOF2<-----------GT1                --------->At4g35610    --------->ANAC58      <---------HSFC1(2)   --------->MYB52(1) ->ATHB12       <---------At4g35610    --------->ANAC58---------->DOF2  ---------->DOF2   --------->MYB59   ggactgagactcaaacacagatgccactcgatgtcagaaacgagccactttcgtgacaaaagaagcttggaaagcaaagataaataacgggtttggttgg  18143500                                                  <---------ALFIN1                                               <---------ZAT18                                   --------->TOE2(3)     --------->ANAC46             --------->HSFC1(2)     --------->ANAC58             <---------HSFC1(2)----------->RAV1(2)                           <-- -MYB83        <------ZmHOX2a(1)  --------->HSFB2a(1)                                           ----- -MYB46(1)    --------->ICU4      <---------HSFB2a(1)                                   ---------->DOF2 -P  --------->ANAC58  --------->TOE2(3) <-----------HVH21                           --------->O2<---   acatatcaagccagtgaggattagaccttagatggaaccttggtgtcagtgtccacctgtttttggccttcgaacttgtctatagccacttgaagctcgt  18143600  Previous    Next  AGI:  At2g43770.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46309.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 18141138    to: 18143078    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g43780.1    Description:  similar to hypothetical protein OsI_037823 [Oryza sativa (indica cultivar-group)] (GB:EAY83864.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99375.1); similar to Os12g0611700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067254.1) Range:  from: 18143521    to: 18143724    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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