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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                    --------->GLK1(1)
                                 --------->LBD16
                                --------->HSFB2a(2)                                              ---
                                <---------HSFB2a(2)                                            <----
       <----------DOF2         <---------LBD16                            <-----------GT1      <----
   <---------CCA1(2)      --------->ARR11(3)                          <---------DAG2           <----
------DOF2                <---------ARR11(3)                          <----------DOF2         <-----
---->TOE2(3)            ----------->ARR10                    <-----------RAV1(1)             -------
 
ttagtcgtctcttttgtttattaggctgagatgttcgggaattgcattttgtaagttttgggttttgttggaactttttgcaattcagtgagagatgtgc  18069400
                      <---------ANAC46
        --------->At4g35610
     --------->At4g35610
     <---------At4g35610  --------->ARR14(2)                                    ---------->ID1
  <---------ANAC58   <---------ZAT2                                      <---------ARR11(3)
  <---------ANAC58   <---------At4g35610                              --------->At5g28300
----------->OsCBT --------->At4g35610                                ----------->GT1
-----ANAC58       <---------At4g35610                                <---------ANAC46
-----ANAC46      --------->ALFIN1                                   <---------DEAR3(1)             <
-----ANAC58      <-----------RAV1(1)                               --------->ZAT18          --------
--TEIL  <---------At4g35610                       <----------DOF2  --------->ZAT14   <----------DOF2
-->ALFIN1   <---------ARR14(2)     <---------MYB46(3)              <---------ZAT14 ------>ZmHOX2a(1)
 
gtgttgtttgctgcagaaatgtgctgctggtttcgcatttgttgaattttgggctttctgtcttattttgtgcggtgatatttgtcctctttgaataaag  18069500
                                                                                      <---------O2
                                                                                      <---------ANAC58
                                                                                      <---------ANAC58
                                                                                      --------->ANAC55(2)
                                                                                      <---------ANAC46
                                                                                      --------->TGA1a
                                                                                      <---------TGA1a
                                                                                      <---------bZIP60(2)
                                                                                      <---------bZIP60(1)
                                                                                      --------->bZIP60(1)
                                                                                      --------->TGA2(1)
                                                                                      <---------TGA2(1)
                                                                                      --------->O2
                                                                                      ==============
                                                                                     ----------->STF1
                                                                                    <---------TGA2(2)
                         --------->REM1(2)                    ---------->DOF2      ----------->TGA1
    <---------DAG2    <---------ANAC58                        ==================================bZIP_DOF
    <----------DOF2   <---------ANAC46                  <------------CBF           ----------->HVH21
   <---------DAG2     <---------ANAC58                <---------YAB1             <---------ANAC58
-----------GT1 --------->DAG2                        --------->TOE2(3)        --------->GLK1(1)<----
-->DOF2       ---------->DOF2                        --------->YAB1<-------TEIL  <---------ANAC58 <-
 
ttttcccctttttaaaaaaaagtttgcgtttagagctaagtttatgttttttgtaatcttattgagaaagttcatgaactgatatcgtgacgtcttctat  18069600
                                                                 ------>ZmHOX2a(1)
                                                                --------->TOE2(3)
                                                             --------->ARR14(2)
                                                             <---------ARR14(2)
                                                         --------->YAB1
                                                      --------->HSFB2a(2)                  ---------
                                                      <---------HSFB2a(2)                 <---------GLK1(2)
        <-----------RAV1(1)                       ------>ZmHOX2a(2)                       --------->ARR11(3)
       <---------ANAC46                           ======================HOX2a_HOX2a       --------->ARR14(2)
  <------MYB83              <---------AHL20(2)   <------ZmHOX2a(2)                        <---------ARR14(2)
  <------MYB46(1)           --------->AHL20(2)   =======================HOX2a_HOX2a<---------MYB52(1)
 <---------TOE1(2)          <---------AHL20(1)  --------->ARR11(3)               <---------ANAC58
<--------P --------->ALFIN1--------->AHL20(2)   <---------ARR11(3)               <---------ANAC46
=========MYC_MYB         --------->TOE2(3)      <---------ARR14(2)               <---------ANAC58
-------RAV1(1)<---------AtMYB61                 --------->ARR14(2)           <---------GLK1(2)
--------REM1(1)        <-------TEIL         <---------ANAC46 --------->GLK1(2)--------->GLK1(2)   <-
 
gttgtaggttactggtggaggtttgattcattaaattttgctacgttgtgggatcttcaagaagaatcctttgtatgtaagattccgtttgaagattctg  18069700
                                                                                     --------->ARR11(3)
                                                                                     <---------ARR14(2)
                                                                                     --------->ARR11(1)
                                                                                     <---------ARR11(3)
 <---------AHL20(2)                                                                  --------->ARR14(2)
 --------->AHL20(2)                                                                ----------->ARR10
>GLK1(2)                                           <-----------GT1         <-----------HVH21      <-
---------DOF2  --------->ICU4               <---------ANAC46        --------->AHL20(2)--------->CCA1(2)
 
tcttttaatttgttagtaatgtttagtttgttattcaacttgatgtgtcttatttttcatgctctagcagtttaaatctgtcatcgaagatatggaaaac  18069800
                                    <---------ARR11(3)
                                    <---------ARR14(2)
                                    --------->ARR11(3)
                                    --------->ARR14(2)
                       <------MYB83 <---------GLK1(2)
                       <------MYB46(1)
                       ----------->GT1
               --------->DAG2<---------AHL20(2)                                                    <
              --------->DAG2 <---------ICU4                                                       --
       --------->HSFC1(1)    -------->HAHB4                       --------->At4g35610      <------ZmHOX2a(1)
       --------->HSFB2a(2)  <---------YAB1                 <------MYB46(1)                 =========
       <---------HSFB2a(2)  <---------ATHB51               <---------MYB46(3)          <---------MYB52(1)
   <---------ANAC58   --------->MYB59               --------->MYB52(1)               <---------ANAC58
   <---------ANAC58   --------->MYB46(2)      ------->GAMYB<------MYB83              <---------ANAC46
---------DOF2---------->DOF2--------->ICU4 ----------->RAV1(1)    <---------At4g35610<---------ANAC58
 
ccttttgcttctagagaaaaggggtttggtaattattcagattttccaacagaacaaatggatggtttaagctcaaactttggttctggcgttaggaatt  18069900
      <---------YAB1                                                        --------->LBD16
    <---------At4g35610                                            ------->GAMYB
    --------->YAB1                                                --------->MYB46(3)
------>ZmHOX2a(2)                     ------->TEIL              <-----------GT1      --------->AHL20(1)
================================HOX2a_HOX2a                    ----------->HVH21     <---------AHL20(1)
---------GLK1(1)              <---------ZAT2                 <---------REM1(1)       --------->ARR11(3)
------->ARR11(3)<-----------GT1    <---------YAB1      <------NtERF2        <---------At4g35610-----
=======HOX2a_HOX2a       ------>ZmHOX2a(1)           ----------------->AGL1--------->ANAC46    <----
 
tgatctctgatgatatgttcaacccttcctccgagcttatgaatttcgactctttggccgcatggtgtaacagcccttccgctactgatatattgttcgc  18070000
                                                           ----------->HVH21
                             <----------DOF2               --------->WRKY12                     ----
                            <---------DAG2               --------->ZAT2                 <---------MYB46(3)
                    -------->P                           --------->At4g35610            --------->MYB52(2)
             <---------GLK1(1)                           <---------At4g35610           <---------TOE1(2)
------------>AGL2   ------>MYB46(1)   <----------DOF2<---------REM1(1)  -------->P    <---------MYB52(1)
-------------AGL1   ------>MYB83    <---------At4g35610 ------->TEIL    --------->MYB52(1)     <----
 
ccaatatggtctgtcgaactcccaacctatgccttttggagctttcacttcatttcatgtagctgacccgaaggctaccagtctcactcgttcgttctat  18070100
                                         <------ZmHOX2a(1)
                                        --------->ANAC58
                                   <---------At4g35610
                                   --------->At4g35610
                                   <---------ZAT2
                               <-----------HVH21
                              ==================HOX2a_HOX2a
                              ------>ZmHOX2a(2)                                                   --
                             ===================HOX2a_HOX2a                                       --
                             <------ZmHOX2a(2)                                                    --
       --------->ARR11(3)   <---------ARR14(2)                                                 -----
       <---------ARR11(3)   --------->ARR14(2)                                               <------
   ---------->DOF2          --------->ARR11(3)                                              <-------
----->ATHB12                <---------ARR11(3)                                        <---------ANAC46
-----YAB1               ---------->DOF2 --------->ANAC58  <-------TEIL              <---------ZAT14
 
gatttggaaagctcttactatggtgaagaaagatcgtcagcacaggaaatgaattctcagtttcatcgctcttcagatagcgatgagttaagtggtaaac  18070200
       <-------GAMYB
      ----------->GT1                       <---------ZAT14
      <---------MYB46(3)                    --------->ZAT18
      --------->MYB111(2)       --------------->AtSPL3
------->ANAC58          <<<<<<<<<MYB2       --------->ZAT14            --------->ATHB12
------->ANAC58        <------MYB83       --------->At4g35610           --------->YAB1
------->ANAC46        <------MYB46(1)--------->ANAC58       <----------DOF2
---->ANAC46       --------->ATHB12   --------->ANAC58    <---------ARR11(3)
---DOF5.7(2) --------->YAB1    --------->MYB52(1)      --------->LBD16<---------ATHB12
--WRKY12  --------->WOX13(1)  ------>ZmHOX2a(1)        <---------TOE1(2)
 
gacgcaaggttgttaatcagaagattggttttcctaacgtactcaactgtactattcccaggtctttgagccactcattagatgagaagatgcttaaggc  18070300
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AGI:  At2g43500.1   
Description:  RWP-RK domain-containing protein. similar to RWP-RK domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G59580.1); similar to RWP-RK domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G59580.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO46233.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71840.1); similar to NIN-like protein 2 [Lotus japonicus] (GB:CAE30325.1); contains InterPro domain Plant regulator RWP-RK (InterPro:IPR003035); contains InterPro domain Octicosapeptide/Phox/Bem1p (InterPro:IPR000270)
Range:  from: 18069792    to: 18073716    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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