Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------AHL20(2)                                        <---------AHL20(2)                                      <---------AHL20(2)                     <---------ARR11(3)                                     <---------AHL20(2)                      --------->ARR11(3)                                     <---------AHL20(1)          <-----------HVH21                                     --------->ARR11(3)       <---------ANAC58                                     <---------ARR11(3)       <---------ANAC58                   --------->ATHB12  --------->AHL20(1)  <---------------AtSPL8          <---------MYB52(1)                  <-------TEIL       --------->AHL20(2) <---------ARR11(3)  <---------CCA1(2)         --------->ICU4     ---------->DOF2        --------->AHL20(2)     ------>ZmHOX2a(1)         -  ----------->GT1 <---------YAB1   --------->GLK1(2)---------->DOF2<-----------GT1  -------->P      <   agagttgtgaaatgtttagtttcattgcatcaaagagaatatattttttcaaataaaagatagtacttgtcacttcctatatctcttacctgttaactag  17909200                                                                               <---------YAB1      --                                                        <------MYB83        --------->GLK1(2)      --    --------->AHL20(2)                                  <------MYB46(1)  <---------YAB1           <-- --------->AHL20(2)                                     ----------->GT1<---------AHL20(2)       <---- -------->AHL20(2)            ------>ZmHOX2a(1)     --------->ZAT2     --------->AHL20(2)       ----- ---------AHL20(2) --------->AHL20(2)               <---------ZAT2    --------->AHL20(2)      <------   aaataaataaacaaatccaaaaaaaatgtgtcctacttacttactaatgcttcaagcttggtaacacatcaaattaatattctgatatatcatatatcac  17909300      ---------->DOF2 ---->MYB83                                                       --------->ATHB12 ---->MYB46(1)<---------AHL20(2)                                 --------->ICU4 -------CCA1(2)         <------ZmHOX2a(1)                        <---------YAB1                   <-- -----ANAC55(2)      <---------LBD16                           ---------->DOF2     --------->YAB1 --- ---->ANAC55(2)<---------AHL20(2)                     <---------YAB1<---------WOX13(1)           ---- -----GT1     --------->AHL20(2)          --------->MYB59  --------->ANAC46    <-------TEIL ---------   ctatcttacaaagtcattaattttcaggatggaagagattagattaggcactgcttattatacgataaagattgatatggatgcatcatatttccgaaat  17909400                                                                                               ------               <---------MYB52(1)                             --------->AHL20(2)              -------             <---------TOE2(3)                                <---------AHL20(2)              <------             --------->ANAC46                                 --------->AHL20(1)            --------- -------------AtSPL8          --------->ANAC58               --------->AHL20(2)          --------->YAB1 ------>DAG2<---------At5g28300                         --------->ANAC58              --------->YAB1 ------>DOF2<---------LBD16   --------->ANAC46          --------->ANAC58         <---------ATHB12---- >LBD16    <-----------GT1    --------->ANAC58<---------MYB52(1)                 ----------------->AGL3   aaagtacaagtatttacggtatgtgattttgctcgaaacttaagagtcgtttcttagtaagaaattaattaacatcgacacaaatcaaaaatagtaacga  17909500                                                             <---------ICU4                     <----                                    --------->At4g35610      <--------HAHB4                    ------      ----------->GT1               <---------At4g35610      --------->YAB1                   <------  --------->AHL20(2)             <---------At4g35610         --------->ATHB12              <---------ICU4  <---------AHL20(2)        --------->TOE2(3)                *TSS      --------->YAB1   --------->REM1(1) ->GAMYB <-----------GT1    --------->TOE1(3)               <---------YAB1      --------->YAB1------- -->MYB46(3)             ------->TEIL  <---------At4g35610  <---------ATHB12   <---------YAB1<------- ---MYB52(2)       <-------TEIL  --------->At4g35610        --------->ICU4   --------->YAB1--------->YAB1 >MYB52(1)    ----------->TBP------>ZmHOX2a(1)   --------->MYB46(3)   <-------TEIL   <---------ANAC58 --->TEIL------->TEIL   <---------CCA1(2)     --------->REM1(1)   <---------TOE2(3)  <---------ANAC58   acataaaaatgtaactatatatacatgtatccttaagctgctgctactacaacaactcgctaatcattaagtttcataactataatggcttcatcatcat  17909600                                                             ------>MYB46(1)                                                           <---------MYB59                                                           <---------MYB46(2)                                                           <---------MYB111(1) -----YAB1                                               ------->TEIL           <-----------HVH21 --->TOE2(3)                                         --------------->AtSPL8  <---------ZAT2 ---ICU4                                          <----------DOF2            <---------At4g35610 -->YAB1       --------->GLK1(2)           ------>ZmHOX2a(2) ------>MYB83    --------->ZAT2 --YAB1 --------->YAB1       <---------TOE2(3)    <---------DAG2             --------->At4g35610   caatatcaaatcacaagattccaaacacactaatgtttttggtgatcgtaaactttttgtacctaattcaaactaattcagctgtcagtatcagttccaa  17909700                                   <---------At4g35610                   --------->GLK1(2)                  --------->ARR14(2)                               <---------ANAC46                  <---------GLK1(2)--------->ZAT2                  <---------ANAC58                  <---------ARR11(3)                               <---------ANAC58         --------->O2 <---------HSFB2a(2)               ------>MYB83       ------->GAMYB       <---------ALFIN1            --------->At4g35610  ------>MYB46(1)   --------->MYB46(3)    ------->GAMYB <---------ARR14(2)        --------->YAB1        --------->MYB52(2)        ------->TEIL   ttccaactcccacttctcaagattctcgagacatcgaagctcaccatcatcaaaaaccaaacaagggtttcttgcaacggtccaagagagtatgaaccat  17909800                                                              ------->MYC3                                                              <-------MYC3                                                              <-------MYC2                                  <----------DOF2            --------->TGA1a                       --                                  =====================================bZIP_DOF             ---------                                <---------DAG2             <---------ALFIN1              <---------At4g35610                           --------->TOE2(3)             <---------ALFIN1                --------->At4g35610                        <-----------GT1           --------->SPL7                         --------->ZAT2                    <----------DOF2            ----------->GT1------->MYC2   --------->ANAC46     ---                   <---------ANAC58           <-----------------------TaNAC69(2)    -----------------                   <---------ANAC58           --------------->AtSPL3<------ZmHOX2a(2)    <---------ZAT2   gctctcttggctcgttctcttgctttcaacctcactctttctcatcgaaccgtacaaacccacacgttcgatcccatccacgactgcctcgagctgctcg  17909900                                                                              --------->ANAC46                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                              <---------MYB52(2)       ----------->HVH21              <---------ICU4                      --------->ANAC58     <---------O2                     --------->YAB1                      --------->ANAC58     <---------TGA1a                  -------->HAHB4                    <---------ALFIN1     --------->TGA1a                 --------->ICU4                    --------->ZAT14     --------->O2                    <---------YAB1                    --------->At4g35610       <---   <---------ALFIN1                --------->YAB1                      <---------At4g35610       ---- ---->NtERF2                   --------->LBD16                         --------->ZAT2--------->ANAC58 >At4g35610                   <---------ANAC46                  ---------->CDC5  ------->TEIL    <--- ------>ANAC46               <---------LBD16    --------->ARR11(3)  --------->ZAT18  --------->ANAC58 ---->WRI1                  --------->AtLEC2    <---------ARR11(3) --------->ANAC46  --------->ANAC46   acgacacacttgacatgttatctcgcatccatgcggataatgatgaagaagatgtccatacatggctaagcgcagcactcacgaaccaagacacttgtga  17910000                                                                        <---------MYB52(1)                                                                  ------>MYB83             <---------WRKY18(1)                                                                  --------->MYB52(1)    <---------ANAC58                                                                <---------MYB59      <---------ZAT18                                                                --------->AtMYB61  --------->ZAT2                                     <---------ANAC58      <---------MYB52(2)      --------->STY1(2)                                 --------->ANAC58         --------->ANAC58 <-------GAMYB<---------ANAC58               <---------ARR14(2)--------->ANAC58         --------->ANAC46<---------MYB46(3) <-------               --------->ARR14(2)--------->ANAC46  <---------ANAC58    <---------MYB52(1)<----------DOF2 ------ZAT2    --------->GLK1(2)<---------LBD16    <---------ANAC58-------->P--------->WRKY38(1) ----->At4g35610         --------->AtLEC2       <---------GLK1(1) ------>MYB46(1)  <---------STY1(2) ------At4g35610   --------->LBD16   <---------ANAC58     --------->ANAC58--------->MYB52(2) <-------   gcagagccttcaagaaaaatccgagtcatacaaacacggacttgcgatggatttcgtcgcaagaaacctaaccggtttgttgactagctcgcttgacttg  17910100  Previous    Next  AGI:  At2g43050.1    Description:  ATPMEPCRD; pectinesterase. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT3G59010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45285.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 17909561    to: 17911520    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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