Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->AHL20(2)              <---------AHL20(1)              <---------AHL20(2)              <--------ATHB1              <---------ICU4              --------->YAB1        ----------->GT1                                            --------->YAB1        <---------ANAC58                           <---------AHL20(2)        --------->ANAC55(2)                        --------->AHL20(2)        <---------ANAC55(2)                        --------->AHL20(1)        <---------ANAC58                ---------->DOF2           <---------YAB1 ---------GLK1(2)  <-----------GT1    ------>ZmHOX2a(1)        <---------YAB1 ---YAB1<---------ANAC46             --------->TOE2(3)     --------->GLK1(1)             ---------->DOF2 ------AGL15 <---------ATHB51        --------->TOE1(3)     <---------GLK1(1)   <----------DOF2 ----->AGL15 --------->ICU4     ------->TEIL      --------->AHL20(2)     <------ZmHOX2a(2)          <   tagaatcgtttcgtaataatttttctctctgatgtatttccttaaagaaaaaaaaaattggaattctgatcatagatcagtctttaaaaaaaaaagtcta  17719900                                                              ----------->GT1                                                        <---------AHL20(2)                                                        --------->AHL20(2)             --------->At5g28300                       <---------AHL20(2)            ----------->GT1                            <---------AHL20(1)       <---------ANAC46                                --------->AHL20(2)     --------->MYB52(1)                             --------->AHL20(2)    ----------->HVH21                               --------->ATHB51  --------->At4g35610                               <--------ATHB1 --------->GLK1(2)                                  <---------ICU4                      --------->AHL20(2) <---------ARR14(2)         --------->AHL20(2)      <---------AHL20(2)                 --------->AHL20(2) --------->ARR14(2)     ------>ZmHOX2a(1)          --------->ICU4       <---------AHL20(2) <-----------ARR10<---------ARR11(3)               <---------ATHB12    --------->AHL20(2)     ------- ---------GLK1(2) --------->ARR11(3)               <---------ATHB51--------->ICU4  <-------TEIL   gagaatctgacggacagtaacatctcctaattcaatatgaaatagaaaatgcaataatttaattttgtaaaaatttaaaatgaagtccattaaaaaaaaa  17720000                                 <---------ANAC58                                 <---------ANAC55(1)                      --------->ARR11(3)                      --------->ARR14(2)                      --------->AGP1                      <---------AGP1                      <---------ARR14(2)               ------->GAMYB   <-----------GT1              --------->MYB46(3) <---------ANAC58             <---------At4g35610 <---------ANAC46      <---------AHL20(1)    <--------HAHB4                     <---------ANAC58      --------->AHL20(2)    <---------ICU4                  --------->ZAT18      <---------AHL20(2)    --------->YAB1                  <---------ZAT18      --------->AHL20(1)   <---------YAB1                  <---------ANAC46     --------->AHL20(2) ------>ZmHOX2a(2)                  <---------ANAC58     <---------AHL20(2)<------ZmHOX2a(2)       <--------P  <---------ANAC58                      ----   --------->YAB1     <---------ARR11(3)   --------->At4g35610 <---------ANAC58        <-----------HVH21 --->DOF2   --------->MYB52(1)<---------YAB1  --------->At5g28300  --------->ZAT6     --------->ANAC46   gtctaaaataaattcaacggacaagatctattattacttgtgaacagcggtagattatggagcgtgcttacactctctcgacgtttataagtcacagact  17720100                                                         <----------DOF2                                  --------->ZAT6         <---------DAG2 <---------MYB52(1)         ---------->DOF2        <-----------GT1  <---------At4g35610 <-------TEIL             <------      --------->TOE1(3)        <-----------GT1   --------->At4g35610--------->GLK1(2)        <-------      --------->TOE2(3)<-----------GT1        <-----------HVH21     --------->ARR14(1)   <---------AHL20(2) ------->GT1   -------->P  <----------DOF2   <-----------RAV1(1)   <---------GLK1(2)     --------->AHL20(2)   tgaaaaaaccctaaagctaccaaagtttcctttttaactctctctatctgtcgctgcaacttttcaagagattcgtttttttctagggtttttaattaca  17720200                                    <-------TEIL<-----------GT1              ------->GAMYB<---------ANAC46                                   --------->GLK1(2)                        --------->MYB46(3)                                   --------->CCA1(2)                       --------->ANAC58      ----                                  --------->ARR11(1)                       --------->ANAC58      <--- ---At5g28300           <---------ARR11(3)   --------->YAB1             <-------TEIL      <---------ANAC58 ----GT1                --------->ARR11(3)--------->YAB1          --------->LBD16         <---------ANAC58   gttcaaagttaccaaaaaccttgagagatactaagagattcgaagcataataactcttgttgttgttccgaagatgcaaccaaaaacagagttcgtgaag  17720300                                                                                         ------->GAMYB                                                                                         --------->DEAR3(1)                                                                                        --------->MYB46(3)                                                                                   --------->REM1(2)                                                                                 --------->At5g28300                                                                                 --------->LBD16                                                                                <---------ANAC46                                                                               <------NtERF2                                                                              ------>NtERF2                                                                              --------->ABI4(1)                                                                             --------->RAP2.3(3)                                                                             --------->RRTF1(3)                                                                             --------->DEAR3(1)              <---------SPL7                                                 --------->RAP2.3(2)             <---------ANAC58                                               --------->ATERF1(1)             <---------ANAC46                                               --------->RAP2.3(1)             <---------ANAC58                                               --------->ORA47(2)            <-------TEIL                                      <----------DOF2<---------DEAR3(1)           --------->ALFIN1      <-----------HVH21       <---------DOF5.7(2)--------->RAP2.6(1)        --------->DAG2        ------>ZmHOX2a(2) --------->ANAC46            --------->ERF1      ---------->DOF2       --------->ARR11(3)  --------->ANAC58           <---------RAP2.3(1) ----->ARR11(3)             <---------ARR14(2)  --------->ANAC58      <----------DOF2   --------->DEAR3(2) ------ARR11(3)      <------ZmHOX2a(2)  <-------TEIL   --------->DOF5.7(2)--------->ANAC46  ---------   ttcttgagaaaaggtgcgtatggatcagtcgatctcgtcaagtacatcaaacgcgacgataacgctttgcctctttacgccgccgtgaaaaccgccgaat  17720400                                                                <---------ANAC58                                                                ------>ZmHOX2a(2)                                                                <---------ANAC58                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                              --------->ARR11(3)                                                             <------ZmHOX2a(1)                                                            <---------HSFB2a(1)                                <---------GLK1(2)           <---------HSFC1(2)                                --------->ARR14(2)          --------->HSFC1(2)               --------->HSFB2a(2)                          --------->HSFB2a(1)               <---------HSFB2a(2)                         <---------TOE1(2)       --------->REM1(1)        <---------ARR14(2) ====================HOX2a_HOX2a  --------->ZAT6  ---------->DOF2--------->GLK1(2) <------ZmHOX2a(1)                    <----------DOF2 >DEAR3(1)     --------------->AGL15             <---------TOE2(3)                 --------->YAB1 <--   gtgaagactacaactctctcgaaagagaaattcagattctatccaaacttgaaggatgtcgaaggatcgtgcaatgctatgggaattatactttagaaga  17720500                                                     <-----------RAV1(2)                    --------->LBD16              --------->ZAT2                   <---------ANAC58              <---------ZAT2                   <---------ANAC58              <---------At4g35610               <---------ARR14(2)                --------->At4g35610             <---------MYB46(3)              --------->ANAC58           <-------GAMYB                     --------->ANAC46          <---------MYB46(3)                 --------->ANAC58          <---------DEAR3(2)                <---------ZAT14         <---------DEAR4(1)                 --------->ZAT18         <---------At1g77200                --------->SPL7         <---------DEAR3(1)               <---------SPL7                        <-------GAMYB         <---------DREB2C(2)             <---------ANAC58                      ----------->GT1      <        --------->DDF1                   <---------ANAC58 ----------->GT1   ------------>AtMYB77   --       <-----------HVH21                <---------------AtSPL8          <---------ANAC46           <-      <-----------RAV1(1)         <-------GAMYB ------->TEIL            <---------AtLEC2     -------- ----ZmHOX2a(1)--------->ARR14(2)<---------MYB46(3) --------->ZAT2     <-------TEIL       --------->CCA1(2)   ggacttcgatgtcggtggattccgagtctacaagatggttatggagtacgcagctgcagggagtttattcagtttcatggacagttacaaagatagaaag  17720600             <---------YAB1           --------->ATHB12          --------->ICU4    <---------ARR14(2)    --------->ARR14(2)  --------->ANAC46  --------->LBD16 --------->HSFB2a(2)           <---------YAB1                              --------->ATHB12 <---------HSFB2a(2)  <---------ZAT14                                     <-------TEIL ---------LBD16---------->DOF2<---------TOE1(2)                           <---------YAB1 ------->MYB52(1)     --------->ZAT14                               <---------MYB52(1) --------At5g28300   <----------DOF2     <---------TOE2(3)         <-------GAMYB                 ---- -->DOF2  <---------YAB1      <---------TOE2(2)    xxxxxxxxxxxxxxxx>smallRNA(i)    <------ZmHOX2a(2)   ttaccggaaacgatgattaaagactttactcgtatgattcttcaaggattagtctctgttcatagactcggttatgttcattgcgatctaaaacccgata  17720700                                                                           --------->KAN4(2)                                                                           <---------ARR14(2)                                                                          <---------HSFB2a(1)                                                                          --------->KAN4(1)                                                                          <---------KAN4(1)                                                              ---------->DOF2        <---------ANAC58                                                          --------->HSFC1(1)         <---------ANAC58                                                    --------->ARR14(2)    --------->HSFB2a(1)                                                    <---------ARR14(2)   <---------ARR14(2)                                                 <---------ANAC58        <---------KAN4(2)                         --------->TOE1(2)       <---------ANAC58        ---------->TaMYB80                       <<<<<<<<<ARR1             <---------ANAC46        --------->ARR14(2)                      --------->GLK1(2)       --------->GLK1(1)      <------NtERF2   <---------ANAC46                 <---------ETT(2)             <---------GLK1(1)--------->DAG2     <---------WOX13(1)               --------->REM1(2)       <---------GLK1(1)  <---------HSFB2a(2)   --------->ATHB12    <        <----------DOF2<<<<<<<<<ARR2  <---------ARR11(3)  <---------HSFC1(1)--------->GLK1(2)      <- ----->GLK1(2)--------->AtLEC2        --------->ARR11(3)  --------->HSFB2a(2)  <---------YAB1  ------   atctacttgtctttccatgtagacaatcttacgaattgaagatttcagatttcgggtcttcgagaaaagtcggagaatattctgattgctgggatgttga  17720800  Previous    Next  AGI:  At2g42550.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G27510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24628.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 17720274    to: 17721308    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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