Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ------>ZmHOX2a(1)                                                  --------->ANAC58 -----------GT1                                                             --------->ANAC58 >ZmHOX2a(2)                                                               --------->SPL7 -->CCA1(2)                                                              <---------SPL7 --AGP1  --------->LBD16                                                --------->TOE2(1) ->AGP1<---------LBD16                                                  --------->TOE1(1) ->ARR11(3)             ----------->GT1                             --------->GLK1(2) --ARR11(3)       <-------TEIL                                 <---------YAB1          --------->TOE1(3) ->ARR14(2)   <---------ARR11(3)                            --------->ARR14(2)         --------->TOE2(3) --ARR14(2)   --------->ARR11(3)     --------->AHL20(2)     <---------ARR14(2) ---------->DOF2  -----   aataacatttcctgaagatgttcatttagaaaaaaaaaaaaaaatcgaaactttccaaatcaaatctgataatctcgtacccaaagaaacctcaaacaca  17708100               --------->ANAC58               --------->ANAC46               --------->ANAC58             <---------ALFIN1            <---------ZAT18                   <---------------------WRI1            --------->ZAT14                 --------->YAB1          --------->ANAC46                 <---------ATHB12          --------->ANAC58               --------->WOX13(1)          --------->ANAC58            <------ZmHOX2a(2)                           <---------TOE2(3)        --------->AtMYB61            --------->AGP1                               <---------TOE1(3)     <-----------GT1                 <---------ARR14(2)                <-----------HVH21           <- --------->AHL20(2)   <----------ID1 --------->ARR14(2)               <----------ID1    ---------->DOF2 ------>GT1 <---------ZAT14     --------->MYB52(1)       ---------->DOF2 <---------WRKY12     -------   gaaaaaaataccactccactcaaaaaaacaaaaaaaacagatccaatcatcgataaaaacaaagtagagaaaacgtcaagggctaaggtctaaagagaaa  17708200                                                    --------->At4g35610                                                    <---------At4g35610                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                 --------->CCA1(2)                                                <---------ARR11(3)                                                --------->AGP1              --------->SPL7                                        --------->ZAT2                   <---------ANAC46                                        <---------ZAT2                   <---------ANAC58                                        <---------At4g35610    <------ZmHOX2a(2)                             <---------ZAT14    <---------ARR14(2)       <---------ANAC58                          <---------ANAC58      --------->ARR14(2)       <---------RAP2.6(2)                         <-----------------------TaNAC69(2)   --------->ARR11(3)                   --       <---------At4g35610<---------ANAC46      --------->ARR11(3)  --------->ATHB12            <----       ----------->RAV1(2)<---------ANAC58      --------->ARR14(3)  <---------MYB46(3)         ------ --------REM1(1)  --------->LBD16       --------->At4g35610   <---------ARR11(3)         --------->ARR14(2) --->DOF2<-----------RAV1(1) --------->ZAT18    <---------ARR14(3) <---------ATHB12      <---------ARR14(2)   gttgtaggcacctgttgctccgagagaggcttgcactgcatgagctgcgagatctgctcatcaagatcaatggttgcgtccgtcggaatagaattcgcgc  17708300                             --------->LBD16                  --------------->AGL15                            <---------HSFB2a(2)               ====================================MADS_MADS                            --------->HSFB2a(2)               <---------------AGL15                           <---------LBD16                  ----------------->AG                           ------>ZmHOX2a(2)                ======================================MADS_MADS                           ==============================HOX2a_HOX2a                           =======================HOX2a_HOX2a<---------------AGL15                          ========================HOX2a_HOX2a--------------->AGL15                          <------ZmHOX2a(2)                 <-----------------AG                  <--                          ===============================HOX2a_HOX2a             --------->ZAT6  ----                         --------->ARR14(2)                 <-----------------AGL3               ----                    <---------SPL7                <------ZmHOX2a(1)           ------>ZmHOX2a(1)  <---      <---------MYB52(1) <---------ARR14(2)<------ZmHOX2a(1)----------------->AGL3--------->TOE1(3)     --------->TOE2(3)--------->SPL7   <------ZmHOX2a(2)    <-----------------AGL2--------->TOE2(3) --------------------->TaNAC69(2)      ==================HOX2a_HOX2a         <---------MYB59    <---- --NtERF2           <-----------HVH21 --------->ARR11(3)    ----------------->AGL1<-----------------AGL3 >NtERF2      <---------CCA1(2)       <---------ARR14(2)    <-----------------AGL1--------------->AGL15   ccattttcgttaattcgtctctcgtccgatccggaaaacagatcaggaaacaggactaggtttccaaattaggggaagtcctaaccctaaattggatgga  17708400     --------->ARR14(2)     <---------ARR14(2)                                                                          <---  <---------ANAC58                                                                               ----  <---------ANAC46          <---------DAG2                                                       ----  <---------ANAC58       <---------ALFIN1                                                     <------ -------HSFB2a(1)     --------->ANAC46                                                        <------ ----->GLK1(2)      <-----------GT1                                                       <----------DOF2 ----->ARR14(2)    <-----------GT1                                                        =========== ------ARR14(2)<----------DOF2                                                   ---------->ID1*TSS<- -----GLK1(2) <---------DAG2<----------DOF2                                  <----------DOF2  <------   atctgcgtattcttcgccttttttcccccactttctctctctctctctctctctctctctctctctctctctctctcttctttgtctcttcgctttgtgt  17708500                                   <------ZmHOX2a(1)                             <---------ANAC58                             <---------ANAC46                             <---------TGA1a                             <---------ANAC58           ===============================HOX2a_HOX2a   ---------->DOF2           --------->TGA1a   ====================================bZIP_DOF ------ZAT14                 ========================================bZIP_DOF                       - ----->ZAT18               <---------ANAC58               <----------DOF2                           < ----->ZAT14               <---------ANAC46            ------->TEIL                                 < ---ANAC46 <------ZmHOX2a(2) ========================================bZIP_DOF            <-----------GT1 ---ANAC58<---------ARR11(3) <------NtERF2            <---------CCA1(2)             --------->TOE2(3) ======================================bZIP_DOF   <---------ANAC46      <----------DOF2--------->YAB1 --------ANAC46            <---------ANAC58     <---------MYB46(3)  <----------DOF2 --------->YAB1  - ---ANAC58--------->ARR11(3)------>NtERF2      <---------AtMYB61 <---------ARR11(3)<---------YAB1  <-   gcagtgaaagaagatcgaattttgagaaggcgcgtgaggagagaagcgagtggtttgtatctttcgagctctttcttttgctattaccataatacccctc  17708600          <---------ZAT18          --------->ZAT18     <---------WOX13(1)  <---------AHL20(2)  <---------YAB1 -------->TOE2(3)   ----------->HVH21 ----------DOF2    <-----------HVH21 ---------------AGL15                                             <---------At4g35610 -------------->AGL15                                   ------->TEIL     <---------AHL20(2) ----------------AGL3           --------->ZAT6    <-----------GT1 --------->At4g35610     <----------DOF2   tactttaattggtgcaatagccatcaccggtttaatactaacttctacggtttaactgaaccggtttcagcttatataatcgtctcgagagacttttgcc  17708700                                                                                                   <-                                                                        --------->CCA1(2)         <--                                                                     ----------->ARR10           <---                                                                  <------NtERF2                  ----                                                                 ------>NtERF2                 <-----                                                          ----------->HVH21        ----------->HVH21        --------->DAG2                                   <-----------HVH21       --------->LBD16 <---       ---------->DOF2                  *TSS <----------DOF2    <----------ID1--------->MYB52(1)-----   ttcgcttcataaagctctctctctctagtctcacagtctcgctctctcttttttatctctgtgatggcgacgagatttgataccggtgaaagtattgggt  17708800                                                                <---------DEAR3(2)                                                                <---------MYB46(3)                                                               <---------DEAR3(1)                                                              --------->ATERF1(1)                                                              <------NtERF2                                                <------ZmHOX2a(2)                                               <---------ARR11(3)                                               --------->ARR11(3)<-------GAMYB -----NtERF2                               ---------->DOF2   ------>NtERF2 -------LBD16                          --------->ANAC58     <---------ATERF1(2)                   --- ------DEAR3(1)               <---------HSFB2a(2)           --------->DEAR3(1)               <------- ----->ETT(1)            ------->TEIL  --------->ANAC58     --------->ATERF1(2)             <-------- ------HVH21     <---------LBD16<---------At4g35610        <---------RAP2.6(2)     <-------GAMYB  --- ------ANAC46   <---------LBD16 --------->At4g35610    <----------DOF2            <-----------RAV1(1) ---->ALFIN1<---------GLK1(1) --------->HSFB2a(2)------>ZmHOX2a(2)           ------>NtERF2 --------->CCA1(2)   cggggaaaacttcgatttctcgggatgaatttgcagaagactcgctaaagatcgtttctttgccgccggttgagaacgacgactctgttgaagagatgat  17708900            --------->ANAC58            --------->ANAC58        --------->ANAC58   ---------->DOF2                                                     <---------GLK1(2) ------>ANAC58                                             <---------ATHB12            <----------DOF2 --YAB1 --------->ANAC58   <----------DOF2               --------->GLK1(1)     <-----------GT1 -------------WRI1        <---------DAG2            ----------->GT1    --------->ARR14(2) ------>ANAC58 ---------->DOF2                   <------ZmHOX2a(1)     <---------ARR14(2)    --------   aagcccaaagaagcaagtaaagtcttcgccttttacttctgtttttgagaaggatggagaaatcatccattcggattctattgacatttctttctccgaa  17709000  Previous    Next  AGI:  At2g42500.1    Description:  PP2A-4 (protein phosphatase 2A-4); protein serine/threonine phosphatase. Identical to Serine/threonine-protein phosphatase PP2A-4 catalytic subunit (PP2A4) [Arabidopsis Thaliana] (GB:Q07100;GB:Q7G9R3;GB:Q9ZRF6); similar to PP2A-3 (PROTEIN PHOSPHATASE 2A-3), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT3G58500.1); similar to Serine/threonine-protein phosphatase PP2A catalytic subunit (GB:Q06009); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186) Range:  from: 17704745    to: 17708495    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g42510.1    Description:  spliceosome protein-related. similar to spliceosome protein-related [Arabidopsis thaliana] (TAIR:AT1G54380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67777.1); contains InterPro domain Survival motor neuron interacting protein 1; (InterPro:IPR007022) Range:  from: 17708740    to: 17711696    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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