Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <-------GAMYB                                                                     <---------MYB46(3)                                                                   <-------GAMYB                                                                   <---------ANAC58                                                                   <---------ANAC58                                                                  <---------MYB46(3)                         <-----------RAV1(1)                     <---------TOE2(3)              -----                        <---------TOE2(3)                  <---------------AGL15               ------                    --------->TOE2(3)                      --------------->AGL15               <-----              <---------AHL20(2)                          <-----------------AGL2              <------             --------->AHL20(1)                           ----------------->AGL3           --------->AHL20(2)             <---------AHL20(2)                           ----------------->AG             <---------AHL20(2) ----->ZmHOX2a(1)   <----------DOF2                       <-----------------AGL3           <---------YAB1 --ANAC58    --------->AHL20(2)                           ----------------->AGL2     <---------ALFIN1 --ANAC58    <---------AHL20(1)                 ---------->DOF2  <---------YAB1    --------->AtMYB61   tcctcaaatgtcaaatttatttctttaatgttgtttgagtttcaaacttgcaaagtgcaaaccaattttggttgttatactaaaaccacacatataatta  17670100      ------>MYB83      ------>MYB46(1)    <---------MYB55(2)         --------->ANAC46    --------->MYB46(3)         --------->ANAC58                                    --------->ARR11(3)   --------->ANAC58            --------->ANAC58                                ----------->GT1   --------->ANAC58         <XXXXXXXXXXXXXXXXXXXXMIR844                    --------->AHL20(1) ----->DOF2              <---------ANAC46            --------->ANAC46      <---------AHL20(1) --->AHL20(2)        <-------TEIL          --------->ZAT14           ----------->GT1 ----AHL20(2)    <---------AHL20(2)      <---------YAB1         <------ZmHOX2a(1)<---------YAB1   <-- ---YAB1        --------->AHL20(2)     <-----------GT1      ---------->DOF2--------->ARR11(3)--------   aagacacccactatagcataaaattcgtcgtgtaagcaattttactatagtctaaactccataaaaggacgtcgaaaaatattgtgatattggaattata  17670200                                                            --------->ANAC46                                                            --------->ANAC58                                                     --------->AHL20(2)                                                     <---------AHL20(2)                                               <-----------GT1                                           <---------AHL20(1)    <---------MYB52(1)                  --------->AHL20(2)  --------->ANAC58         <---------ZAT14 -------ZAT6               <---------ANAC46--------->AHL20(1)                       <----------DOF2 ->YAB1       <----------DOF2       <-------TEIL <---------YAB1         <---------ICU4   <---------ZAT6   gtgtcagtttgtttttctttgggcaaatggattgtagtttcattatatattacaatttataaacgaaacgataagtatggctcatactttagtgatggag  17670300                                                        <---------YAB1                  ----------->GT1                                                       <---------AHL20(2)     <---------AHL20(2)                                                       --------->AHL20(2)     --------->AHL20(2)                                                      --------->AHL20(2)  <---------CCA1(1)                                                      <---------AHL20(2)  <---------RVE1(1)         <---------AHL20(2)     <---------YAB1        --------->YAB1     --------->ARR11(3)         -  <---------TOE2(3)      <-----------------AGL1<-----------GT1           <---------ARR11(3)         < ---------->DOF2      ----------->HVH21     --------->YAB1       --------->YAB1     <---------YAB1 <-   aattaaagtattttatattcagagatgacacaatatggtagaccaaaaataactaattaaaatagtatcatattagatatttatatgtgattgtaaattt  17670400        <---------ZAT18                                                                         <----        --------->ZAT18                                                                        ------        <---------ZAT14                                                                        ------     <---------ANAC58                                                                          ------     <---------ANAC58           --------->ANAC58                                       --------->AHL20(2)     <---------ANAC46           --------->ANAC58                      --------->YAB1  ----------->TBP -------->ATHB12 <---------AHL20(2)      ----------->GT1             <---------YAB1 --------->YAB1 ---------ICU4   --------->AHL20(2)    ---------->DOF2             --------->YAB1 <-----------TBP --- --------YAB1   --------->AHL20(2)---------->DOF2         <----------DOF2        <----------DOF2-----   gatcattgagtgaacattttaaattagtatgcccaagaaagaaaagaaaaaaaaaaaactctttctctctcatgataatgttccttttataaaatccacc  17670500          <---------ALFIN1        ------>MYB83        ------>MYB46(1)                                                    <---------ZAT18      <---------MYB111(1)                                                  --------->ZAT18      <---------MYB46(2)                                                 ------->PIF5      --------->AtMYB61                                                  ------->MYC3      --------->MYB46(3)                                                 <-------PIF5     --------->ANAC58                                                    <-------MYC3     --------->ANAC58                                                    <-------MYC2     <------ZmHOX2a(2) -----MYB55(2)                    <---------ANAC58                       ------->MYC2    <---------ARR14(2) --->ANAC46             <---------ICU4                           ----------------------->TaNAC69(2) --->ANAC58            <---------YAB1            --------->MYB46(3)--------->ZAT18       --------->ARR14(2) --->ANAC58           *TSS        <---------ANAC58--------->AtMYB61<---------ZAT18   ------>NtERF2 ------->DOF2        <---------ICU4      <----------DOF2       ==================================HOX2a_HOX2a ---->MYB46(3)       --------->YAB1   ---------->ID1           ------>ZmHOX2a(1)    --------->DEAR3(1)   caaagacaccaaacacttctccatcatcatttcatttcttgttctttttccaccatcaccatttcctagttcgctcgtgcacatctccgacgatcccaat  17670600                                                              <---------------AtSPL3                                                              --------------->AtSPL8                                                  <---------WRKY38(1)           <---------GLK1(1)                                           --------->ARR11(3) --------->DAG2    --------->GLK1(1)                              <---------ARR11(3) --------->WRKY18(1)        --------->ANAC58    -----     <---------ICU4  <---------ICU4       --------->RVE1(1)   <---------------AtSPL8     <----------DOF2     --------->YAB1 <---------ATHB12      --------->CCA1(1)  ---------->DOF2--------->ANAC58 <-------   tctaaaatcatcacttcttccaatcttttcaacatctcttcaaaatatccagtcaacaaaaaaaaaagtacttaaaacaaggaaaccccttctttctttt  17670700                                                                       <---------MYB46(3)                                                                       --------->LBD16                                                                 --------->MYB52(1)                                                               --------->SPL7                                                         --------->MYB52(1)                                                         <---------DOF5.7(2)                                                        ----------->HVH21                                                       <---------MYB52(1)                                                       --------->DOF5.7(2)                                                      --------->LBD16  <---------ATERF1(1)                                                     <---------HSFB2a(2)--------->ATERF1(1)     -----                                                --------->HSFB2a(1)    ------>NtERF2            -----                                                <----------TaMYB80    <---------ANAC46          -----                                                <---------HSFB2a(1)   <---------DEAR3(1)      <------                       <---------DAG2           --------->At4g35610   --------->ALFIN1        <------                       <----------DOF2          <---------At4g35610  <---------LBD16          <------                     XXXXXXXXXXXXXXXXXXXX>MIR837-5P  --------->HSFB2a(2)<------NtERF2        <-------TEIL                 --------->YAB1         --------->DEAR3(1)  ------->GAMYB----------->HVH21<---------ANAC46                 <---------ICU4 --------->MYB52(2)  <-----------------AGL1  <-----------RAV1(2)<XXXXX ---------->AtSPL8  <XXXXXXXXXXXXXXXXXXXXMIR837-3P  <---------LBD16 ------->GAMYB<-------TEIL-------- ---DOF2 --------->TOE2(3)--------------------->WRI1----------------->AGL1------>NtERF2  <---------DEAR3(1)   tgtacatataacataaaaatcatcacttttttgttcgtttcgccgatggcatcttccggtaacggtacaacggcggggacaggttcaccatgcggtgcat  17670800                                                                                <---------ZAT2                                                                                <---------At4g35610  --------->ARR11(3)                                                           <---------TOE1(2)  <---------ARR11(3)                                                       <-------TEIL ---->ANAC58                                                              --------->ARR14(1) ---->ANAC58          --------->ARR14(2)                                  --------->CCA1(2) ---->AtLEC2      --------->ZAT18            --------->SPL7              --------->ARR14(2) ---ANAC58        <---------ZAT18          --------->ZAT14               --------->ARR11(1) ---ANAC58       --------->ALFIN1         --------->DEAR3(1)             <---------ARR14(2) ---AtLEC2   <------ZmHOX2a(1)           --------------->AtSPL8          <---------GLK1(2) XXXXXXXXXXXXXXXMIR825<---------ARR14(2) --------------->AtSPL3        ----------->ARR10 ->ABI4(2)<------ZmHOX2a(1)            <-----------GT1           --------->At4g35610         --------   gcaagttcttgaggaggaagtgcgcatccgattgtatatttgcaccgtacttctcatcggagcaaggagcagcaagattcgcagctattcacaaggtgtt  17670900                                                                  --------->AtMYB61                                                             <-----------TGA1                                                            --------->ETT(2)                                                            <---------ETT(2)      <-----------RAV1(2)                                                            <---------TGA2(1)  --------->ZAT2                   <---------ARR11(3)                       --------->TGA2(1)  <---------At4g35610     --------->MYB46(3)                                     --------->bZIP60(1)<---------ZAT2     <---------MYB52(2)                                     <---------bZIP60(1)--------->At4g35610    --------->ANAC58      <----------DOF2              <---------At4g35610    ------->TEIL    --------->ANAC58     <---------ANAC58              --------->At4g35610 --------->ANAC46     -----    --------->ANAC46     <---------ANAC58          ----------->HVH21    --------->DEAR3(1)    <------ ->ALFIN1          --------->ARR11(3)         ------>ZmHOX2a(2)  --------->MYB46(3)    <-------TEIL   tggagcaagcaacgtttctaagctcttgcttaatgttccaatccatgatcgatgtgaagctgtcgtcaccatcgcctacgaagctcaggctcgtcttcat  17671000  Previous    Next  AGI:  At2g42430.1    Description:  LBD16 (ASYMMETRIC LEAVES2-LIKE18). Identical to LOB domain-containing protein 16 (LBD16) [Arabidopsis Thaliana] (GB:Q9SLB7;GB:Q0WLD7); similar to ASL16/LBD29 (LOB DOMAIN-CONTAINING PROTEIN 29) [Arabidopsis thaliana] (TAIR:AT3G58190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70688.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 17670522    to: 17672373    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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