Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->LBD16                                                                               --------->ZAT14                                                                         ------>MYB83                                                                         ------>MYB46(1)                                                                       --------->MYB46(3)                                            ---------->DOF2            <---------MYB111(2)                                           --------->AtMYB61           <---------MYB111(1)                                          --------->ANAC58             --------->AtMYB61                                          --------->ANAC58             <---------MYB46(2)                                         ------->TEIL                  <---------MYB55(2)                                       --------->MYB46(3)             --------->ANAC58            ---                                      --------->ANAC58                --------->ANAC58       --------                                      <---------ALFIN1                --------->ANAC46       --------                   ------>ZmHOX2a(1)  --------->AtLEC2               ------>NtERF2         -------->P     ---------->DOF2                  --------->ANAC58              <---------ALFIN1     --------->MYB46(3) --WRKY12         --------->TOE1(3)   --------->ANAC46              --------->ANAC46    --------->At4g35610 --WRKY38(1)      --------->TOE2(3)  ------>NtERF2                 --------->MYB46(3)   <---------At4g35610 >WRKY18(1)    --------->ARR14(2)   --------->DEAR3(1)           ------>MYB83<---------LBD16 ------->GAMYB -ATHB12       <---------ARR14(2)   <---------ALFIN1             ------>MYB46(1)       --------->ANAC46 --HVH21 --------->ALFIN1        --------->ANAC46              --------->AtMYB61     --------->At4g35610   ggccgtttaaagtgttgaatcctcaacgttgttcttcgccacgcaccaaagctccgtctctaatacctccccaccaaactccgcagtagcagcaaccgta  17650000  <------ZmHOX2a(1)                                              --------->LBD16 ----------->GT1                                        <------ZmHOX2a(2)              <---------LBD16 ------>ICU4            <------ZmHOX2a(1)              <---------ARR11(3)   ------>ZmHOX2a(2) ------- ->TOE2(3)        --------->ATHB12              --------->ARR14(2)          ========================= ->YAB1          <-------TEIL  --------->ALFIN1 <---------ARR14(2)     <---------WOX13(1)    --------   atgaggagaaatagagagattcattaggaagcagtgaggctgagagagagaatacacgatcattttccgagagattgatcgattttgtactcggagattt  17650100                                                                        <---------ANAC58     <-------                                                                        <---------ANAC46     <-------                                                                    --------->CCA1(2)       ---------                                                                   <---------ARR14(2)       <--------                                                                 ----------->ARR10       <---------AHL20(1)                                                                 --------->ICU4          --------->AHL20(1)                                                     <---------YAB1--------->ARR11(3)  --------->AHL20(1)       <------ZmHOX2a(1)                         <-------GAMYB ---------->DOF2   ----------->GT1    <    <------ZmHOX2a(1)                           <---------MYB46(3) --------->ARR14(2)  <---------AHL20(1) -->GLK1(1)                                     --------->MYB52(2) --------->ARR11(1)  <---------AHL20(2) ==========HOX2a_HOX2a                <-----------RAV1(1)  <---------TOE2(3)    <---------TOE2(3)<--- ->ARR11(3)  ----------->GT1         --------->ARR11(3) <---------YAB1  <---------ANAC58 --------->AHL20(2)   cgaagaggaggaagagtgtgaatttgaaagagtcgaatagatgttggagtttgttgtgattaatgtaaagatttgggtgaataatgtaaaatattttaat  17650200        <------------CBF     <---------MYB52(1)  <-----------------AGL1 --------->MYB52(1) --AHL20(2)                                      ------>NtERF2 --YAB1<---------MYB46(3)                       --------->LBD16 >AHL20(2)                                      ------>NtERF2 -AHL20(2)                         <---------ANAC46                                   --------->At4g35610 -----------GT1           --------->ATHB12    <---------LBD16                         <---------At4g35610 ------ICU4       <-------GAMYB    ----------->GT1       <-------TEIL    <---------ATHB12   tcttaccggttattgaactcggttatactgatttgggccgtattaaactccggcccatatacatatgggcctctaatgaagtgtttttagctgctctgtt  17650300                                                                                         ============                                                                                         ------>ZmHOX2a(2)                                                                                        =============                            --------->ICU4                                              <------ZmHOX2a(2)                      ----------->GT1                                                  --------->ARR14(2)                     <---------YAB1                                                    <---------ARR14(2)                     <---------TOE1(3)                                                <---------GLK1(1)                     <---------TOE2(3)                                                --------->GLK1(1)                   --------->YAB1                                                   =================                   <---------ICU4                                                   =================                  --------->ICU4                                                    <------ZmHOX2a(1)                <---------ICU4                                                   ==============HOX2a_HOX2a                --------->YAB1                               <---------DAG2      ===============HOX2a_HOX2a               <---------AHL20(2)                       ------>ZmHOX2a(1)  ---------->DOF2               --------->AHL20(2)                  <---------At4g35610   --------->HSFB2a(2)  ----------->TGA1<---------ATHB51             <----------DOF2   ------------>CBF<------ZmHOX2a(1)  ----------->HVH21-------->HAHB4      ---------->DOF2 --------->TOE2(3) <---------HSFB2a(2)   tttgatgacggagcatattaattatggttaattagtaaacaaaaagactctttagctccttaaccttttcaatttctgaaagaggaggagatcggaaaac  17650400                            <----------DOF2                            ------>ZmHOX2a(1)                        --------->ARR14(2)                        <---------ARR11(1)                   --------->LBD16                   ------>NtERF2                  <---------DEAR3(1)                 <---------LBD16                          --------------->AGL15                ------>ZmHOX2a(1)                         <---------------AGL15              =====================HOX2a_HOX2a           <-----------------AGL3              ------>ZmHOX2a(2)                          ----------------->AGL3             ======================HOX2a_HOX2a           ==============================MADS_MADS             <------ZmHOX2a(2)                       --------->At5g28300            <---------ARR14(2)                      ----------->GT1            --------->ARR14(2)                    <-------TEIL            ------->TEIL--------->GLK1(2)       --------->ARR11(3)                      <----------DOF2      <---------ATHB12  <---------ARR14(2)      <---------ARR11(3)                --------->ANAC58     <-----------HVH21 <---------ARR14(1)       --------->ARR14(2)            --------->ANAC58 ======================HOX2a_HOX2a              <---------ARR14(2)            --------->ANAC58 ======================HOX2a_HOX2a            --------->ANAC58         --------------->AGL15   <----- ===================HOX2a_HOX2a   ------->TEIL--------->ANAC58<---------AHL20(2)  --------->ANAC58 ====================HOX2a_HOX2a <---------AtLEC2--------->CCA1(2)   <-----------------------TaNAC69(2)   aaaacccagtcatggatcctccggcgaatccttttgcatctcgagagcaagatacagtaactattttaagaaacctgattaagcaagctactttggagga  17650500                                                                           <------ZmHOX2a(1)                                                                         <---------TOE2(3)                                                                  --------->ANAC58                                                                  --------->ANAC58                                                                 --------->SPL7                                                               <---------SPL7--------->GLK1(1)  -----                                                              <---------ANAC46          --------->MYB52(1)                                                            <-----------HVH21<---------GLK1(1)  <----                                 --------->LBD16     <---------ZAT6    --------->ICU4<------ZmHOX2a(1)                        --------->GLK1(2)    <---------GLK1(2)--------->ETT(1)     <---------TOE1(2) -ZmHOX2a(1)           <---------GLK1(2)  --------->YAB1   <-----------RAV1(1)    <-----------RAV1(2)   agaagtctctgaagcttcagagacacattctgttccgaacaaaatcagaattttagagtcagtgtcggacgaaatgaggaaatcgcaggagaacggtagt  17650600                                                                                      ---------->DOF2                                                                                   <---------PCF2                                                                                  ----------->TCP11(1)                                                                                --------->ALFIN1                                                                              --------->MYB55(2)                                                                              <---------MYB46(3)                  <------ZmHOX2a(1)                                          --------->ALFIN1            <---------ANAC58                   --------->ANAC58              <---------DEAR3(1)            <---------ANAC46                 ---------->DOF2           ----------->HVH21            <---------ANAC58        <---------LBD16           <----------DOF2<---------AtMYB61 ---->ICU4<---------ZAT14         --------->GLK1(2)      <----------DOF2 <---------At5g28300 -----ZAT6--------->ZAT14   <---------WOX13(1) --------->ANAC58       <-----------HVH21   gatcagaaacagttgagtgaggaagacgagattgatattctggattcaaaagccatgagcttttcttttagttgtcacggtggtgggccaaagcggaaga  17650700                   <---------At4g35610                   --------->At4g35610                                                 --------->ANAC46                  --------->ANAC58                                                <----------DOF2                  --------->ANAC58                                             ------->TEIL              --------->ANAC58                                                <---------CCA1(2)              <---------ANAC55(2)                                          <---------------AtSPL3              --------->ANAC55(2)                                          --------------->AtSPL8              --------->ANAC58                          <---------ANAC58  <---------ANAC58             <-----------------------TaNAC69(2)         <---------ANAC58  <---------ANAC58   --------         --------->ANAC58                              <-------TEIL   ---------->DOF2  --------->ANAC58         --------->ANAC58                     --------->At4g35610  --------->TOE2(3)   --------->ANAC58   aatgtaacgataagaaacgtaagcagcaagaagagaagtctaagaagaagctcaaggtacttgttgaaacattaaagcttgtacctttcaagccattaaa  17650800                                                                                           ------>ZmHOX2a(2)                                                                                           ==========                  <---------YAB1                                                         --------->ARR11(3)           <---------ANAC58                                                              <---------ARR11(3)           <---------ANAC58                                                            <---------YAB1         <---------YAB1                                                       --------->CCA1(2)     <---------ARR11(3)                     --------->ALFIN1                 <---------ARR14(2)     --------->ARR11(3)                   <---------ARR14(2)                 --------->ARR14(2)     <---------GLK1(2)                <---------LBD16                       <------ZmHOX2a(1)<------- ->AHL20(2)<---------ANAC46   ---------->DOF2            <---------ZAT18    ======================HOX2a_HOX2a   aaccctagattttgcttgttatgagagtctcttaaagactctcggattgtgggattttgtgcatttggaatttgatcaggatatggattatgatcttgtg  17650900  Previous    Next  AGI:  At2g42365.1    Description:  other RNA Range:  from: 17648862    to: 17652913    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g42370.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G58110.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63361.1) Range:  from: 17650412    to: 17652611    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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