Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  ------>MYB46(1)                                                                                ------>MYB83                                                                               --------->MYB52(1)                                                                     <------ZmHOX2a(2)                                                                    --------->AGP1                                                                    >>>>>>>>>GATA-1                                                                    >>>>>>>>>GATA-4                                                                    --------->ARR11(3)                                                                    >>>>>>>>>GATA-3           <------    --------->ANAC46                                                <---------ARR11(3)   <---------At4g35610    --------->ANAC58                                 --------->AHL20(2)       --------->AtMYB61    XXXXXXXXXXXXXXXXXXXX>MIR171B/C                 <---------ANAC55(2)       --------->MYB46(3)    --------->ANAC58     <----------DOF2           --------->ANAC55(1)    <---------ETT(2)    <------ ------TOE2(3)         --------->At4g35610         --------->ANAC55(2)------>ZmHOX2a(2)--------->ZAT18 ------TOE1(3)    --------->YAB1         --------->ARR11(3)         >>>>>>>>>GATA-2    --------->ZAT14 --GT1           <---------YAB1          <---------ARR11(3)        --------->GLK1(1)   <---------ZAT14   aggcttaagccatagcattatcatcagctttgctcaaactcaacatcttaaacacttaattagactcagagatctatcgaccaacgaagtgaactgcttt  17596900                     <----------DOF2                     --------------------->WRI1                   ------>MYB83                   ------>MYB46(1)                 <---------MYB55(2)                 --------->MYB46(3)                --------->ANAC58         <---------TOE2(3)                --------->ANAC58     <---------DAG2                ------>MYB46(1)      ------>ZmHOX2a(1)              ------->GAMYB  <---------ARR14(2)             --------->MYB46(3)      <----------DOF2        --------->TOE1(3)    --------->ARR14(2)  --------->ANAC46<---------ALFIN1---------->ID1 --------->LBD16------>MYB83 <---------GLK1(2)        ----------->RAV1(2)                           - ----DOF2    <---------MYB55(2)<-------TEIL      --------->At4g35610    --------->TOE1(3)     <------ ---DAG2--------->TOE2(3)    --------->ARR11(1)  <---------At4g35610    --------->TOE2(3)  --------->ARR14(2)   ttccccaaaaccctaaccacccactttcaaagattcgtcctttatggatttagctcccctgtttccaaatgaaacctcaaaaaacttgaaccatatatac  17597000                                                        --------->GLK1(2)                                                        --------->ARR11(3)                                    <---------YAB1      <---------ARR11(3)                                  --------->YAB1       --------->RVE1(1)                          <----------DOF2           --------->YAB1                                 <-                        <---------At4g35610    <----------DOF2              ---------->DOF2     -----   --------->At4g35610  <------NtERF2        <---------YAB1              --------->At5g28300    <---- -------->At4g35610     <---------ZAT2 <---------YAB1<---------AHL20(2) ----------->GT1  --------->YAB1 -----GT1               --------->At4g35610<---------CCA1(2)   <-----------TGA1         <---------YAB1   tcatcagaagacaacttaactatggcagcttttcaaatatgattcttatctttataaaaatctttcgtcagaaacagtaaaagtaagacgatgatagaga  17597100             <---------GLK1(1)             <------ZmHOX2a(2)             --------->GLK1(1)            <---------ARR11(3)                          <---------ANAC58            --------->ARR11(3)                          <---------O2  --------->ARR11(3)            <---------AGP1                              --------->TGA1a           --------->RVE1(1)                            <---------TGA1a<---------YAB1        ---------->DOF2     --------->YAB1              <---------ANAC55(2)       ------>ZmHOX2a(1) <----------DOF2                <---------ANAC46       =============HOX2a_HOX2a            =======================bZIP_DOF       ==============HOX2a_HOX2a           <----------DOF2 --------->REM1(2)         ----------->TBP ---------DOF2           =========================================bZIP_DOF<---------YAB1     -------- ---->ARR11(3)    --------->YAB1   <-----------HVH21    --------->O2  <---------ARR11(3)     <------- -----ARR11(3)------>ZmHOX2a(2)   --------->ETT(2)      <---------ANAC58--------->YAB1 <---------AHL20(2)   cctttcttcctaaagatctctcatcatctttcatggtcgtcagagctttgctacagagacgtgaagagagaatatcataaatgggctatataatgggccc  17597200                   --------->LBD16                  <---------ANAC58                  <---------ANAC58                  --------->ANAC55(2)                  <---------ANAC55(1)                  <---------ANAC46                                   *TSS               <-----------GT1                                     ------>ZmHOX2a(1)      <---------ALFIN1                                           ----------->RAV1(2)      ----------->RAV1(1)                                        =========================RAV   --------->PCF2<---------LBD16 <------------CBF    --------->At4g35610                          <--  <-----------TCP11(1)<---------YAB1                 <---------At4g35610                    --------- ->ZAT18      <---------GLK1(1)<---------YAB1     <----------DOF2--------->At4g35610       <---------AHL20(2) --PCF2      ------->TEIL<---------YAB1 <----------DOF2     --------->O2      ----------->RAV1(1) ---   taagaggcccacatgaatttccgtatgattcttgtaattgggctttctctggctctactgactcgtctcctgaagaacaacaacaaaacatatttcattg  17597300                                                                       --------->YAB1                                                                       <---------ICU4                                                                 ------>ZmHOX2a(1)          <---------GLK1(2)                                  --------->ARR14(2)       --------->ANAC46                                      <---------ARR14(2)     <---------ALFIN1                                     --------->LBD16   ------>ZmHOX2a(1)                                      ------>ZmHOX2a(1) -------At4g35610                                       ----------->RAV1(2)                <---------HSFB2a(2) >ATHB12<---------ATHB12     <----------DOF2         <----------DOF2  <---------ATHB12     --------->HSFB2a(2) ------>At4g35610       ------>ZmHOX2a(1)         XXXXXXXXXXXXXXXXXXXX>MIR781      <---------MYB52(1)   agctcctccactgaatcgctctcatccttcgcttcttcgaattccaaaggttagactttcctgaatccttcaataatctctcttcgttgtcttctgtaac  17597400                                         <-----------GT1                                  <---------ANAC58                                  <---------ANAC58                           --------->AHL20(2)                           --------->ATHB51--------->REM1(1)                 <---------WOX13(1)   <---------ZAT6   --------->At4g35610                        >>>              <---------ZAT6   <-----------GT1         <---------At4g35610                   <-------        <---------ZAT6    <---------MYB52(1)   <----------DOF2  <----------DOF2 <---------LBD16 -----   atttcttctattgttagtgatggattccattattttccttgtgttacaactttgatgagctcaatgctttcacaaactaggtttcggaatttttgtttca  17597500                                            <---------HSFB2a(2)                                            --------->HSFB2a(2)                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)                                          --------->CCA1(2)                                         <---------AGP1                                         --------->AGP1                                         <---------ARR14(3)                                         <---------ARR14(2)                                         <---------ARR11(3)                                         --------->ARR11(3)                                         --------->GLK1(2)                                --------->AHL20(1)                                <---------AHL20(1)      <-----------------AGL2    <---------AHL20(2)      <-----------------AGL3   --------->AHL20(2) >>>>>>>>>>>>>>LFY           <---------GLK1(2)       ----------->GT1---------->DOF2              ---- ----GT1               <-----------GT1   --------->ARR14(2)<---------AHL20(2)   <----------DOF2  <--- ---->WOX13(1)     <----------DOF2       --------->ARR14(3)<---------YAB1    ------>NtERF2       <---   atccaatgtctctatttgggtctttaaaccagattatattgaagatctggaaaatgggtttataattttgtaaagaccgcgactttgaaaacttcaattt  17597600                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                            <--------                             <---------ICU4                                                <---------                            --------->ICU4                                                 <-------GAMYB                   ------->TEIL                            ------>ZmHOX2a(2)              <---------ANAC58                 --------->LBD16                         <---------ARR11(3)               <---------ANAC58                --------->ANAC46                      <---------WOX13(1)                 --------->ZAT18    --------->GLK1(2)  ----------->GT1              --------->ATHB12                  <---------ANAC46 ------->GT1   <---------LBD16              <---------AHL20(2)                        <---------ANAC58 ---MYB46(1) --------->ARR14(2)       --------->AHL20(2) --------->ARR11(3)     <-----------GT1<----- ---MYB83    <---------ARR14(2) <-----------GT1    <---------YAB1    <-------GAMYB    <---------ANAC58   ggtgaaattctttcaaatccgcatcttgtaaaaatcacatttttatatttttgttgattgatcttgttctctgttgaatgtttaacttgtgtgcgttagg  17597700                                     <---------RVE1(1)                                     <---------CCA1(1)                         --------->ZAT2                         --------->At4g35610 -MYB46(1)               <---------ZAT2 -MYB83                  <---------At4g35610 -->MYB59              <-----------RAV1(2)                   <---------MYB52(1) -->MYB111(1)         =====================================HOX2a_HOX2a -->MYB111(2)         ------>ZmHOX2a(2)                     <---------At4g35610       <---------YAB1 -->MYB46(2)         <------ZmHOX2a(2)                      <-------GAMYB   ---------->DOF2 -->MYB52(2)        --------->ARR14(2)                     <---------MYB46(3) <---------TOE2(3) --MYB55(1)         ------->TEIL    xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->YAB1           - -MYB52(1)          <---------ARR14(2)              <------ZmHOX2a(1)     <<<<<<<<<ARR2             < -DOF2        --------->ICU4        <---------ARR11(3) <------MYB46(1)    <---------ATHB12      <---- ----ANAC46   <---------ATHB12      --------->ARR11(3) <------MYB83     --------->WOX13(1)      <----   tagaacagtagaagaaatcatggatccagctgaaatgagatatttggaagaagaggatggtccgttgatgaagacaatcaaaggtagtatcactggtttt  17597800  Previous    Next  AGI:  At2g42210.1    Description:  ATOEP16-3; P-P-bond-hydrolysis-driven protein transmembrane transporter. similar to unnamed protein product [Vitis vinifera] (GB:CAO23372.1); contains InterPro domain Mitochondrial import inner membrane translocase, subunit Tim17/22; (InterPro:IPR003397) Range:  from: 17597269    to: 17598930    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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