Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                              -------     ----------->HVH21   --------->AHL20(2)                                                   ------>NtERF2   ----------->RAV1(2)   <---------AHL20(2)              --------->ANAC46                     ------- ------>TOE1(3)      --------->AHL20(2)                  --------->ANAC58                   <-------- ----->HSFB2a(1)     <---------AHL20(2)                  --------->ANAC58        --------->LBD16----- ------HSFB2a(1)    --------->AHL20(2)       --------->ICU4         --------->ATHB12      --------->ARR14(2)   ccttcgcctgaaacatccaaaatttaaaaaaattcaaaaacgatgtaatgttgatcaaaacgaaaccaattcattgtataatccagagtcaaattccgcc  17463800                                          --------->ATHB12                                          <--------ATHB1 ---At4g35610                  --------->LBD16 -->At4g35610                 --------->LBD16  <-----------GT1 -->LBD16           --------->YAB1       --------->ICU4                --------->ARR11(3) -LBD16             <---------ICU4       <---------ATHB12              <---------ARR11(3) ---------->DOF2 ---->DEAR3(1) --------->AHL20(2) <------ZmHOX2a(1)         <---------WOX13(1)--------->ANAC46   gaaaacgaattacccaaaaaaatcatcacatcccgaggaatcaatgatttaacaaaacccagattgatcagaagatttcaacgtaatgctgcaaaagaaa  17463900                                                              ----------->RAV1(1)                                                             --------->ANAC58                                    <------MYB46(1)          --------->ANAC58                                    <------MYB83             --------->ANAC46                            --------->ANAC58               <---------ALFIN1                            --------->ANAC46              <------NtERF2                ---------->DOF2    <---------MYB46(3)    ------>NtERF2              <------ZmHOX2a(2)   <--------P             ----------->RAV1(1)            <---------At4g35610  <---------ZAT2         ----------->HVH21            --------->At4g35610  <-------GAMYB          --------->DEAR3(1)        --------->TOE2(3)   --------->ANAC58         <---------DEAR3(1)          <----------DOF2    -     <-----------GT1      ---------->DOF2            ------>ZmHOX2a(2)   --------->ANAC46        ----   aatcaatttacctcagatcaaagcacaaataagccagttggtaactgaaaactgatcggcgacacaccagaaaactcgaaaccctttctctctctgagag  17464000                                                                                                 ----                                                                                                 ----                                       --------->LBD16                                           ----                                      <---------DEAR3(1)                                         ----                                     <---------LBD16                                             ----                                     --------->SPL7                                         ------->GAMYB                                  ------>ZmHOX2a(2)                                        --------->MYB46(3)                                 <------ZmHOX2a(2)                                        <---------At4g35610                                <---------ARR14(2)                                 --------->ANAC55(2)                                --------->ARR14(2)                                <-------TEIL   ----                                <-----------ARR10                                 <------------------                              --------->LBD16                                    --------->CCA1(2)                  <------ZmHOX2a(1)<---------SPL7                   <-----------GT1<---------ANAC55(2)     --------->KAN4(2)       <---------TOE1(2)              --------->YAB1      <---------ARR14(2)    --------->KAN4(1)       <------NtERF2                  <---------YAB1       --------->ARR14(2)    <---------KAN4(1)       <---------LBD16  <---------HSFC1(2)   <---------ICU4<---------GLK1(2)====   <---------KAN4(2)        --------->ATERF1(1)<----------DOF2 --------->YAB1 ----------->ARR10  ----  <---------GLK1(2)       <---------DEAR3(1) --------->HSFC1(2)--------->AHL20(2)--------->ARR14(1) -------->LBD16   ======================HOX2a_HOX2a      --------->YAB1     ------>ZmHOX2a(1)    <--- ----->MYB52(1)   =======================HOX2a_HOX2a    <---------YAB1     --------->TOE2(3)=========   accggattattctctcagtaggatttagtcgccggatcgtccggcgaagcttttagctctgataataatatttccttcctcagatacgtttcaacggcca  17464100      --------->PCF2      --------->ARR14(2)      <---------ARR14(2)      <---------TCP20   --------->LBD16           <---------ANAC58  <---------ANAC46           <---------ANAC46 ------>NtERF2               <---------ANAC58 <---------LBD16            --------->MYB52(2) ----->ANAC46               <---------MYB46(3) ----->ANAC58           <---------ANAC58 ----->ANAC58           --------->MYB52(2) ----->bZIP60(2)        <---------ANAC58 ------->HVH21       <---------MYB52(1) ----->TGA1a        <---------RAP2.6(3)                                                            <- -----TaNAC69(2)   <---------ANAC58                                                                -- ================================MYC_MYB                                                           -- ----->O2   <---------DAG2<---------MYB52(1)                     *TSS                            <--- ------O2<---------ALFIN1<-------GAMYB         <---------YAB1   --------->ZAT6                 ------ ======MYC_MYB     <---------ANAC58         <---------YAB1    <---------AHL20(2)               ------   cgacgcgggttccaccttctgccgtttcgttgcttgctacttcattcttatttttagttcatattaaaactactcttaaacattcttcacataaaaacct  17464200       --------->ARR14(2)       <---------ARR14(2)      <-------GAMYB                                 <---------AHL20(2)     <---------DEAR3(2)                            --------->AHL20(2)     <---------MYB46(3)                        <---------AHL20(2)                     <---------ICU4   <------NtERF2                              --------->AHL20(2)                      --------->ATHB12  <-----------HVH21                  <---------ANAC55(2)                             --------->ICU4 --------->DEAR3(1)                  --------->ANAC55(2)                           --------->MYB111(2) --------At4g35610        <---------YAB1      <---------AHL20(2)                   --------->MYB111(1) ------->At4g35610      <----------DOF2     <---------YAB1 ------>ZmHOX2a(1)       --------->MYB46(2) ------->ZAT2       <---------RAP2.6(2)    <---------AHL20(2) <----------DOF2     <--------P<-------- --------RAV1(2)---------->DOF2     <---------TOE2(3)  <-----------GT1         <---------TOE2(3) --->TOE2(3) ---------->TaMYB80    <-----------GT1 <---------AHL20(2)          <---------AtMYB61 --->TOE1(3) <-----------ARR10--------->AHL20(2)   <---------AHL20(1)      --------->At4g35610   cagccgtcggatgcgaatataagcggctttgattatataacgtattattttaatttttttcctgctttgttgaaatttgctgaggtagttattgcatttt  17464300                                                             <---------ANAC55(2)                                                             <---------ANAC58                                                             --------->ANAC55(2)                                                           --------->AHL20(2)                                                    ----------->GT1                                                <--------HAHB4              --------->ALFIN1                                                --------->YAB1              <---------ANAC58                                               <---------YAB1<---------ANAC58                                               <---------AHL20(2)           <---------ANAC58                                             <---------------AGL15     --------->ANAC46  <---------ZAT2                             --------------->AGL15   <---------ALFIN1    <---------ANAC46  --------->At4g35610                  <---------AHL20(2)  <---------AHL20(2)       <---------AtLEC2  <---------At4g35610                  <---------ATHB51    <-----------GT1  <---------ANAC46  --------->ZAT2    --------->DAG2  --------->AHL20(2) <---------AHL20(2) <---------ANAC46 --DOF2            ---------->DOF2  <---------AHL20(2) --------->AHL20(2) --------->ALFIN1         <-   ggccagctcatacactgctaataaagcaaataatctcttaaattattctataattagttaattacttactcacacggtgtgtgtgtgcatgatgtgtaat  17464400                                                   <---------AHL20(2)                                               --------->AHL20(2)                                               <---------AHL20(2)                                              --------->ICU4                                           <---------AHL20(2)                                         --------->ANAC55(2)                                         <---------ANAC55(2)                                         ----------->GT1                                         <---             --------->HSFB2a(2)       --------->CCA1(2)                                         ----             <---------HSFB2a(2)      <---------ARR11(3)                        --------->HSFB2a(2)          --------->ANAC46            --------->ARR11(3)                <----------DOF2        ------      <-----------GT1                 --------->ARR14(2)         <---------YAB1 <---------HSFB2a(2) --------ANAC46    >>>>>>>>>TBF1      <---------ARR14(2)   ----------->HVH21 <---------YAB1  <-------   tgtgtattatacactctagaagaagaaagttttatttggagatatgtaattttttaattccctgactatgatttcttttcttatagaactgatacacact  17464500                                                                                            <-------MYC3 ------ZAT14               ---------->DOF2                                                  ------->MYC3 ----->ZAT14           <---------YAB1                    ----------->GT1                 <---------ALFIN1 --->ANAC46    ----------->RAV1(2)                      <---------ZAT6               ----------->HVH21 --ALFIN1    <-----------GT1                    <------ZmHOX2a(1)               <---------ETT(2)   tcacttaagtcaatttaacctggtttttataaaggctaaatgttagattaggatgctagtggtgaaatcaagtcgaattctttcgacatgaccacgtttt  17464600                                                                               --------->TOE2(3)   <-                                                --------->ATHB12              <--------HAHB4   ------                                           <---------TOE2(3)                  --------->YAB1   <-----                                           <---------TOE1(3)               --------->YAB1      ------                                       --------->CCA1(2)          --------->At4g35610          <-----                                      <---------ARR11(3)          <---------ZAT2         --------->DOF5.7(2)                                      --------->ARR11(3)          --------->ZAT2--------->DOF5.7(2)--           <---------------AtSPL8   <---------TOE2(3)             <---------At4g35610    <---------MYB52(1)           <---------------AtSPL3   <---------TOE1(3)            --------->MYB52(2)<---------TOE2(3)-           --------->DAG2           <---------YAB1        <---------MYB52(1) <---------YAB1<---------DOF5.7(2)          ---------->DOF2        <---------MYB52(1) --------->ZAT18  ------>NtERF2<---------DOF5.7(2)   gaatttaagagaaaaagtactgaaacattcaattcgttaagatttaaggtttattgcaccgttaagttagctgccacttatcattaacgtcgttaactgc  17464700  Previous    Next  AGI:  At2g41830.1    Description:  cyclin-related. similar to binding [Arabidopsis thaliana] (TAIR:AT5G21080.1); similar to binding [Arabidopsis thaliana] (TAIR:AT1G05960.1); similar to hypothetical protein OsJ_005196 [Oryza sativa (japonica cultivar-group)] (GB:EAZ21713.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40814.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23570.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367) Range:  from: 17457187    to: 17464165    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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