Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->ZAT6                                                                                  ------>NtERF2                                                                                 --------->WRKY38(1)                                                                                 --------->WRKY12                                                                             ------>ZmHOX2a(1)                   --------->ATHB12                                          ========================              <---------ANAC58                                        <---------ARR14(2)              <---------ANAC58                                        <---------ARR11(3)       ----------->RAV1(1)                                            --------->ARR14(2)     --------->At4g35610                                              --------->ARR11(3)     <---------At4g35610                                              <---------ARR14(3)            -    --------->ANAC46                                                  <-----------ARR10            <- -------GLK1(2)   <---------YAB1                                      --------->ARR14(3)           -- --->DOF2     <---------ANAC46                 <-----------GT1       --------->RVE1(1)     <---------MYB52(1)   gagtctcagcaacatggcgcatgatagaatgaacaagtttgctcttgttatacctctcttcacaagtctgaatatcttcctcgctgactctacgtttgct  16837700                                                                                        ----------->HVH21                                                                                        --------->TOE1(2)                                                                                       --------->DEAR3(2)                                                                                       ------>ZmHOX2a(2)                                                                                       ==============                                                                                      <------ZmHOX2a(2)        <-----------GT1                                                               =============== <------ZmHOX2a(2)           --------->LBD16                                         <---------ARR14(2) =======HOX2a_HOX2a         --------->ANAC46                            --------->At4g35610 ------>NtERF2 -------->AGP1             <---------LBD16                        --------->YAB1     --------->ARR14(2) --------At4g35610       <---------REM1(2)                  --------->TOE2(3)--------->ZAT6--------->DEAR3(1) ------->At4g35610<----------DOF2     ----------->HVH21     --------->TOE1(3)<---------ALFIN1   cagatcaatgtaacctttctctttgtcaacacggagaaccatgacaggctcaattcttccgaccttaatcaaactgctaacacttcggatccgacgacga  16837800                                                                 --------->ARR14(2)                 <                <------ZmHOX2a(2)                           <-----------------AG                -----                ===================================HOX2a_HOX2a   <---------ARR14(2)            ------              <------ZmHOX2a(1)                             <-----------------AGL1             ------          ---------->DOF2                                   ----------------->AGL2             ------ <---------ZAT2<---------ARR11(3)                        --------->At4g35610             --------->YAB1 --------->ZAT2--------->ARR11(3)                        <---------At4g35610            <------ZmHOX2a(2) ====================HOX2a_HOX2a                    --------->YAB1--------->RAP2.6(3)  <---------ARR11(3) ====================HOX2a_HOX2a            <------ZmHOX2a(1)   <---------CCA1(2) ----------->RAV1(2)   gagagctcggagaaaaggatcatgccttcgatgttgttgtactcgaggagagaaacataagctcccatatcggcaatgttcttcacctggatcatcaccg  16837900                                                                         --------->ARR11(3)                                               <---------ANAC46       <--------P                                            --------->CCA1(2)       ----------->GT1                                            --------->ARR14(1)      <------MYB46(1)                                            --------->GLK1(2)     <---------WOX13(1)                -       --------->AtMYB61                   <---------GLK1(2)    --------->ATHB12                    <    <---------ALFIN1               <---------ALFIN1         ------------>ATHB5                 ------ <---------ARR14(2)             ----------->HVH21         --------->ANAC58                     ------ --------->ARR14(2)             ------->GAMYB<-------TEIL --------->ANAC46                     ------ ---------CCA1(2)               --------->ANAC46          --------->ANAC58                  --------- ->NtERF2                       <---------ETT(1)  <---------MYB46(3)<------MYB83          --------->At4g35610 --->DREB2C(2)             --------->SPL7  --------->ARR14(2)  <---------YAB1             <---------At4g35610 --->DEAR3(1)           --------->TOE1(1)  --------->ARR11(1)  --------->ICU4        <---------ANAC58 --->ANAC46             --------->TOE2(1)  <---------ARR14(2)--------------->AGL15   <---------ANAC58   ccatatccacctctgggtatttcgcctcgtacatccgacactcgagattcggtgtttgactcgccatgattggtagatttcgatactgcttgagctcacg  16838000                                     <------NtERF2                                                 --   <-----------GT1                  --------->LBD16                  <---------DEAR3(1)            -- -------->ARR14(2)                 <---------DEAR3(1)               --------->ATERF1(1)          ---- ---------ARR14(2)          --------->CCA1(2)                       <------NtERF2             <------ --->ANAC46                --------->TOE1(2)                       ------>NtERF2           <---------HSFB2a(2) --->ANAC58             --------->DAG2                            <---------DEAR3(1)       <---------HSFC1(1) --->ANAC58            ---------->DOF2                            ----------->HVH21        --------->HSFC1(1) -->HVH21           ----------->GT1<---------ANAC46       <----------DOF2                  --------->HSFB2a(2)   cgaattcactcttcgttgaatcgggtaaagctacgaggcggagacacttagggttttagactttttaggcgacggagcaaatcagacaggtttctagaga  16838100                                                                          <-------GAMYB     ---------                                                                          --------->At4g35610<-------           <---------MYB52(2)                                     <------NtERF2            <---------YAB1          --------->ANAC58                            ----------->GT1 <-----------HVH21    <---------AHL20(2)  --------->CCA1(2)                         ---------->DOF2      ------>NtERF2        <------MYB46(1) ------->ANAC58      --------->ANAC58    <-----------HVH21     <---------ABI4(2)      <------MYB83 ------->ANAC58      --------->ANAC58   <---------ANAC46     --------->ANAC58        --------->MYB59 ----->CCA1(2)     --------->MYB52(1)   <---------ANAC58     --------->ANAC46        <---------TOE2(3) ---ZAT6  --------->ANAC58      *TSS    <---------ANAC58     --------->ANAC58  ------------>CBF     -   taagaaatgagcaaggaacacaaacggaaaatgagtcgacttgcgtcaaagatgccaagttaaacggcaccgtgtcagttaaacaattaggttttaattg  16838200                                                                                             --------                                                                                             <-------      <---------ARR11(3)             <---------ARR14(2)                                    --------->ATHB12 >ATHB12                 ----------->GT1                             <----------DOF2     <---------WOX13(1) -----CBF           <--------P---------->DOF2                  <---------ALFIN1 <---------TOE2(2) ---------->RAV1(1)<-----------HVH21 --------->ARR14(2)    ------>NtERF2      --------->TOE2(3)   <--   ggccacaagatagtttcaaggggttaggggttaaaagcctattcgggtttcagacattttcggcccaacttctttcacaacgtaagtttggattgatttc  16838300                                                      <---------------AGL15                                                      --------------->AGL15                <---------REM1(1)                                                     <-----------------AG              --------->DEAR3(2)                                                     <-----------------AGL1            --------->MYB46(3)        --------->YAB1                               ----------------->AGL3          ------>MYB83  <---------ANAC58         --------->LBD16           <-----------------AGL3          --------->MYB52(1)  <---------ANAC58       <---------LBD16             <-----------------AGL2          ------>MYB46(1) ->GLK1(1)       <---------ANAC58                    ----------------->AGL2        <---------MYB59 --GLK1(1)       <---------ANAC46                  <---------ARR14(2)          ----------->HVH21 --------DOF2    <---------ANAC58                  --------->ARR14(2)       --------->GLK1(2)   ctttgcttattcatgaattgcgtttaaaccggagcaaactaaactagagctcgaatccacatttggcagtccaaaaacattctgaccgaaccgatgtaga  16838400                  --------------->AtSPL8            <------MYB46(1)            <------MYB83          --------->ALFIN1          <--------P                                <---------ICU4        --------->ZAT2  --------->TOE2(3)     --------->ANAC55(2)     --------->HSFB2a(2)        <---------ZAT2  --------->TOE1(3)     <---------ANAC55(2)     <---------HSFB2a(2)      <-----------RAV1(2)               --------->DAG2         ---------->ID1      --------->ZAT18  -  <------ZmHOX2a(2)   ------->TEIL     ---------->DOF2    <----------DOF2  ---------->DOF2          -   atcgatcaccaggtgggtttgatgaaccttataccagaatataaagttatgtgatcatgtcttttgtctcttacagaaaaagaagtctactacctcacaa  16838500                                                                                                 <---                                                                                    --------->HSFB2a(2)                                                                                    --------->HSFC1(1)                                                                             -------->P        ------                                                                          <---------ANAC58    <------                                                                          <---------ANAC58  ---------                                                                         --------->At4g35610<--------                                                                      --------->HSFC1(2)--------->ANAC58                                                                      --------->At4g35610  --------->GLK1(2)                                                                      --------->HSFB2a(1)--------->HSFC1(2)          ---------->DOF2                                             <---------HSFC1(2)--------->ANAC58    ---------->DOF2      --------->DAG2                               <---------At4g35610<---------HSFC1(2) ---------->GT1         ---------->DOF2              --------->ANAC46 <---------ZAT2<---------HSFB2a(2) -------->YAB1       --------->YAB1               --------->ZAT14     --------->ZAT2<---------HSFC1(1)   aatcgtaaaagctaaagaactaaacataaagtagacacatatagaaacacagtagacacaagagtccctcgaagctgcttacccttccagaagcatctga  16838600  Previous    Next  AGI:  At2g40290.1    Description:  eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative. similar to EIF2 ALPHA (eukaryotic translation initiation factor 2 alpha subunit), RNA binding [Arabidopsis thaliana] (TAIR:AT5G05470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41422.1); contains InterPro domain Eukaryotic translation initiation factor 2, alpha subunit; (InterPro:IPR011488); contains InterPro domain S1, RNA binding; (InterPro:IPR003029); contains InterPro domain Nucleic acid-binding, OB-fold (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR016027) Range:  from: 16835844    to: 16838132    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g40300.1    Description:  ATFER4 (FERRITIN 4); ferric iron binding. Identical to Ferritin-4, chloroplast precursor (FER4) [Arabidopsis Thaliana] (GB:Q9S756;GB:Q8WHW5); similar to ATFER3 (FERRITIN 3), ferric iron binding [Arabidopsis thaliana] (TAIR:AT3G56090.1); similar to ferritin [Chorispora bungeana] (GB:ABB22752.1); contains InterPro domain Ferritin, conserved site (InterPro:IPR014034); contains InterPro domain Ferritin-like (InterPro:IPR009040); contains InterPro domain Ferritin, N-terminal; (InterPro:IPR001519); contains InterPro domain Ferritin-related (InterPro:IPR012347); contains InterPro domain Ferritin and Dps; (InterPro:IPR008331); contains InterPro doma Range:  from: 16838371    to: 16840358    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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