Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->AHL20(1)                                   <---------ICU4          <---------AHL20(2)                                   <---------AHL20(2)       --------->AHL20(2)                                     --------->AHL20(2)    --------->YAB1                                            --------->ICU4       <---------YAB1 <---------ICU4                                             --------->YAB1        <---------AHL20(2) ------>YAB1                                      --------->GLK1(2)               --------->AHL20(2) --->YAB1 <---------AHL20(1)             --------->ZAT18 ----------->GT1         --------->YAB1     < ---AHL20(2)       <<<<<<<<<MYB98    --------->DAG2      --------->YAB1       --------------->AGL15 < --AHL20(1)      <---------YAB1     ---------->DOF2  <---------YAB1          <---------YAB1         - ->AHL20(1)     <---------TOE2(3)--------->YAB1  <---------GLK1(2)         <-----------GT1         -- ->AHL20(2)--------->AHL20(2)   <---------YAB1 ----------->ARR10  <---------AHL20(2)   --------->AHL20(2)   tcatatttataaaatatttatgttaaatgttcttatgataaagtgcgatgagattctaatagtaataaatatttgttttactattaaaattatatcacac  16589800                                                       --------->ANAC46                                 <---------------------WRI1                               --------->ATHB12       <---------LBD16                              <---------YAB1        --------->ARR14(2)     <-------TEIL          <---------AHL20(2)       <---------ARR14(2)                  --------->YAB1     --------->ZAT14       <---------YAB1         --------->LBD16                       --------->ATHB12  <---------MYB46(3)      <---------AHL20(1)     <---------ANAC55(2)                    <---------ICU4 <---------DEAR3(1)       --------->AHL20(1)  <---------ARR14(2)                        -------->ATHB1 ---------ZAT18           --------->AHL20(2)  --------->ARR14(2)                       <---------YAB1 ---------ZAT14         ------->TEIL         <---------GLK1(1)                 <---------MYB59     -- -------->ZAT14      <---------ATHB12   --------->ZAT18--------->ANAC55(2)     --------->TOE1(3)   << ------->ALFIN1--------->AtLEC2<---------MYB46(3)<---------ANAC46              --------->TOE2(3) <---   agtgcggttcagtcttcatgcaaatgaatataatggttgaagcgaacaaatccgtatacggattaaaacgtttttcatttacctaaaaaatcattgtaaa  16589900                                --------->ATHB12                           <---------AHL20(2)                           <---------YAB1      <-------GAMYB                                  <------                          --------->AHL20(2)  <---------MYB46(3)                             <-------                          <---------AHL20(1)  --------->MYB52(2)                        --------->GLK1(1) ------->MYB52(1)         --------->AHL20(1)<---------MYB52(1)                         --------->ARR14(2) <<<<<<<<<<<<<<<LFY      --------->YAB1   <---------MYB46(3)                      --------->MYB52(1) ------MYB52(2)<-----------GT1<---------WOX13(1)                   --------->MYB52(1)  <---------ARR14(2)   ctaacaatggattgtttttacatacaaatataattgatttgtagcggtttgttgtccatcttgtagatgaaacggactaatcgcaaacggatttgtccac  16590000                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                                                           <---------TOE2(3)                                                                          <---------ICU4                                                                          --------->YAB1                                                  --------->AHL20(2)     <---------ATHB51  <-------GAMYB                                               ----------->GT1   --------------->AtSPL8   --------->MYB52(2)                                              ----------->GT1    <---------------AtSPL8   --------->MYB55(2)                                       <----------ID1         <---------YAB1<-----------RAV1(1)  ---- ---ALFIN1                   ---------->DOF2 <---------TOE2(3)<---------TOE2(3)   <---------ANAC58 --ZAT18      --------->AtLEC2   ---------->DOF2  <---------AHL20(2) ------------>CBF     <---------MYB46(3)   ctcgactgcgataaccattcaaacaagattgaaaagaaagagagacaaaggtttaaatgaaattaagaatgtacaataatgttggcttatggtcgttgga  16590100                                     --------->AHL20(2)                                    --------->AHL20(2)                         <---------ICU4                                --------->AHL20(2)                            <---------YAB1                             <----------DOF2                                  --------->ICU4                             ------>ZmHOX2a(1)                              --------->YAB1   --------                            --------->TOE2(3)                              <---------YAB1  --------->MYB46(3)      <---------ANAC58   --------->ARR11(3)                            --------->ARR14(2)--------->ANAC58      <---------ANAC58   <---------ARR11(3)                            <---------ARR14(2)--------->ANAC46   <----------DOF2   <---------AHL20(2)            *TSS                <---------GLK1(2) --------->ANAC58 ----->ZAT6         --------->AHL20(2)      ---------->DOF2        --------->LBD16<---------ICU4   cactactttcgagcccattacatttaatatcctttaaaataaaaaataaagaaggcgaaaacagtttcccccaaattctcataattttcacaaacaacct  16590200                                                                                                    <                                                                                                  <--                                                                                                <----                                                                                         <---------ICU4                                                                           ------>NtERF2--------->ICU4                                                                          --------->DEAR3(1)  -------                                                          --------->HSFB2a(1)           <---------YAB1                             <-------TEIL                 <---------HSFB2a(1)        <------ZmHOX2a(2)                      <---------ANAC46--------->ZAT18     <---------HSFC1(2)        --------->ARR11(3) >P    <---------TOE1(2)  <---------DEAR3(2)              --------->HSFC1(2)        <---------ARR11(3)   ctcgtcttctaggttaatccaatttcgtcgattcatgaagttcacaattctcccatcggaaaattcttcgtaatcgacgacgaagagatcatgagtaccg  16590300                                                                  ----------->RAV1(1)                            <---------ANAC58            --------->MYB52(1)          <---------ZAT18   <---------ANAC58            <---------DOF5.7(2) <---------TOE2(2)   <---------MYB59                   <---------WRKY38(1) <---------TOE1(2)  ----------->RAV1(2)                --------->ZAT14 ------NtERF2       --------->ANAC55(2)                <---------ZAT14            <---------TOE1(3) -------DEAR3(1)    <---------ANAC55(2)                <---------WRKY12           <---------TOE2(3) -------HVH21<---------At4g35610                     --------->At5g28300<---------ZAT14 -->DEAR3(2) --------->At4g35610                 --------->MYB52(1)     --------->ZAT14           ---   tcggaggtatagagcagttgatacctgattccgtttcaacgtcgttcatcgaaacggtgaacggttcgcaccagttcacgattcaaggttactctctagc  16590400                                                 <---------MYB46(3)                                              <------MYB46(1)                                              <------MYB83                                              <---------MYB46(3)                                             <---------MYB46(3)                                             <---------DEAR3(1)                                             <---------AtMYB61                                            <---------MYB52(1)     <-----------GT1                                           <-------GAMYB         <----------DOF2                                  --------->ARR11(3)   --------->ATHB12                          <---                                  <---------ARR11(3)  <---------YAB1                    <---------ARR14(2)            --------->LBD16       --------->ARR14(2)--------->CCA1(2)         <---------YAB1 --------           <---------LBD16       --------->GLK1(1) --------->ARR14(2)         ------>ZmHOX2a(1)------ ------->DOF2    ----------->GT1 <---------GLK1(1) <---------ARR14(2)       --------->YAB1 <---------LBD16   caaaggcatgagccctgggaagtttatacagagcgatatcttctccgttggtggatacgattgggcgatttacttctatcctgatgggaagaacccggag  16590500            --------->ARR11(3)            <---------ARR11(3)                   <---------ARR11(3)       --------->TOE2(1)                         --------->ARR11(3)       --------->TOE1(1)                        --------->YAB1      ------>ZmHOX2a(1)           <---------ANAC58                    <---------SPL7             ---- ---ZmHOX2a(1)   <----------DOF2  <---------ANAC58         <----------DOF2         <------ZmHOX2a(2) ->LBD16   <---------CCA1(2) <----------DOF2   <---------ATHB12     --------->At4g35610      -------- --->SPL7<---------CCA1(2)   <---------DAG2   <---------TOE2(3)     <---------At4g35610  --------->ALFIN1   gaccagtcctcgtatatctctttgttcatcgctttagcgagtgattctaatgatattagggctttgtttgagcttacgcttatggatcagagtgggaaag  16590600                                                                                   <---------ANAC58                                                                           ----------->GT1                                 <----------DOF2                         ------->MYC3                                <-------GAMYB                            ------->MYC2      --------->DAG2         <---------ZAT18         --------->ANAC46    <-------MYC3  --------->YAB1          ------>ZmHOX2a(2)   ------>ZmHOX2a(1)          <-------MYC2 ------->GT1        <----------DOF2     --------->ALFIN1      ---------->DOF2   <---------WOX13(1) -->DOF2  <-------TEIL    ===========================HOX2a_HOX2a<---------TOE2(3)  <---------ANAC58   ggaaacataaggtgcatagtcactttgatcgggcgcttgaaggtggtccttatacacttaagtataaaggaagcatgtggtaattgcttcgtttccattt  16590700  Previous    Next  AGI:  At2g39760.1    Description:  ATBPM3; protein binding. similar to ATBPM1 (BTB-POZ AND MATH DOMAIN 1), protein binding [Arabidopsis thaliana] (TAIR:AT5G19000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69143.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210); contains InterPro domain TRAF-type (InterPro:IPR013322); contains InterPro domain BTB/POZ; (InterPro:IPR013069) Range:  from: 16590151    to: 16593330    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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