Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------GLK1(2)        --------->MYB52(1)        <-----------GT1                                                                      <-------       --------->AHL20(2)                                                                    --------       <---------AHL20(2)                                                            --------->YAB1    <--------HAHB4                <----------DOF2 --------->HSFB2a(2)               <---------ATHB12    --------->YAB1               --------->MYB52(2)                      <---------YAB1    ----------   <---------YAB1      --------->ANAC46           <---------HSFB2a(2)    <----------ID1    --------->DOF5.7(2) --------->YAB1        --------->ANAC58  <---------ALFIN1       --------->ZAT14 <---------ATHB12 ----->AHL20(2)        --------->ANAC58----------->RAV1(1)    --------->At5g28300 --------->WOX13(1)   taactataattaactgattttcaaaacgctatcgttctttgccacactattgccagaaaatcactgtaaactaatacgataaatcaatcagacgttaccg  16531400                       --------->ZAT14                       --------->ZAT18                       <---------ZAT18                       <---------ZAT14                      --------->ALFIN1                    <---------ANAC46                                             ------>ZmHOX2a(1)               ------>ZmHOX2a(2)           --------->ZAT2               <-----------ARR10              <------ZmHOX2a(2)            <---------ZAT2              <---------CCA1(2)       <---------GLK1(1)     <---------At5g28300                    <---------ATHB12 --DOF5.7(2) --------->ARR14(2)            --------->At4g35610    --------->WOX13(1)  --------->GLK1(1) ->MYB52(1)  <---------ARR14(2)     --------->ETT(2)--------->GLK1(2)--------->YAB1   <---------GLK1(1) ->HVH21 <---------LBD16    <-----------GT1<---------At4g35610  <---------ATHB12--------->TOE2(3)   gttttatagatttcggatcgtcgagtgtagtcacggtctcgacagagctgagaaaatccaaaacaaatcaatcaaatcttatcctcagaaatcggaacaa  16531500                        --------->ANAC46                        --------->ANAC55(1)                        --------->ANAC55(2)                                                  --------                        --------->ANAC58                                                     --------                     <-------TEIL                                                            <-------                 <---------------AtSPL8                                     --------->LBD16  <-------                 --------------->AtSPL8                                <---------GLK1(1)    ---------                 --------------->AtSPL3   --------->HSFB2a(2)          --------->GLK1(1)  <---------At4g35610           ----------->GT1             ------>ZmHOX2a(1)    --------->MYB46(3)            --------->At4g35610     --------->ARR11(3) --------->ANAC58  <---------HSFB2a(2)--------->MYB52(1)        <------ZmHOX2a(2)   attcgaagaaattgagtaaaacgtacacgttactgtgtctccttctccaagcttcaaaaacaacaacggatagaaatccgaataagacgatcagcagcag  16531600                           <---------GLK1(2)                        --------->HSFB2a(2)                        <---------HSFB2a(2)               ------>ZmHOX2a(2)                 <------------AtMYB77                    <------ZmHOX2a(2)             --------->LBD16                            --------->AGP1            --------->ANAC55(2)                         --------->ARR11(3)            --------->ANAC58                            <---------ARR14(2)            <---------ANAC55(2)                         <---------ARR11(3) ->ZAT2 --------->GLK1(1)  --------->ARR14(2)           --------->ARR14(2)  ---------->DOF2 ->At4g35610--------->ANAC46                      --------->CCA1(2)<----------DOF2 --ZAT2 <---------GLK1(1)--------->ANAC46     --------->LBD16     <---------ANAC58              <---- --At4g35610--------->ANAC58        <-----------RAV1(1)<---------GLK1(1)--------->ANAC46        ===== -->RAV1(1)<---------LBD16 <---------ARR14(2)--------->LBD16      <---------ANAC58       <---------ZAT14   ccagaggctgaattccgcaactgttaccagaaactccattgttgctcccgagatttgagatctgttttgctttcacgagaaagagagagagtgaagaagg  16531700                                                           --------->REM1(2)                         --------->ANAC46                --------->LBD16                         --------->ANAC58               <---------ANAC58                 --------->REM1(2)                      <---------ANAC46               --------->LBD16                          <---------ANAC55(2)              <---------ANAC46                          <---------ANAC55(1)              <---------ANAC58                          <---------ANAC58              <---------ANAC55(2)                 <---------WOX13(1)           ------>MYB46(1)                      <--------ATHB1           --------->ARR14(2)                   <---------ICU4           <---------ARR14(2)                   --------->ATHB12                                <----           ------>MYB83  --------->ANAC58       -------->HAHB4                                  -----          --------->WOX13(1) --------->ANAC58  <---------ATHB12     ------------>CBF            <----         --------->AtMYB61   --------->ANAC58  --------->ICU4    ----------->GT1                -----  <------ZmHOX2a(2)   <---------KAN4(2)       <---------TOE2(3)  *TSS                   --------->AHL20(2) --ZmHOX2a(1) <---------ANAC58  ---------->DOF2<---------YAB1    <---------MYB46(3)     <---------AHL20(2) ========HOX2a_HOX2a --------->YAB1   ---------->DOF2  ------>ZmHOX2a(2)  --------->TOE2(3)    ------   agagatcgaaaccaatccgtgaagaataagcaagaaaagctaaagtctaatgattgatccgtgaagatggttcaatccctaatttcagattaaaatgcag  16531800                                                                 <------MYB46(1)                                                                 <------MYB83                                                                <---------AtMYB61                                                                --------->MYB111(2)                                                                --------->MYB46(2)                                                                <---------MYB46(3)                                                                --------->MYB111(1)                                                                --------->MYB59                                                               <---------MYB55(1)                                                              <---------MYB52(1)                                                            --------->MYB52(2)                     --                                                           <-------TEIL                           <--   ------------>CBF                                       <---------MYB52(1)                     <--- --------->At4g35610                                     <---------MYB52(1)                      ---- <---------At4g35610                                  <---------LBD16                    --------->TOE2(3) -----ZAT2                                          --------->ARR14(2)                 <---------ARR11(3) ---->At4g35610                                     <---------ARR14(2)     <---------TOE1(3)     ---- -----At4g35610                                  --------->MYB59--------->MYB55(2)     --------->ARR11(3) ---->ZAT2 <---------TOE2(3)             <-----------GT1--------->LBD16    <---------TOE2(3)    ----- ----->RAV1(1)                  <----------DOF2  <---------TOE2(3)    <---------ZAT6  <---------GLK1(2)   cagagctcaatttgagatagccatttcggtttgacttttggtttagccatttaggttccggttcgtttggtagtgttaatgttgaacaaaatctcaaatt  16531900       ---------->DOF2  --------->AHL20(1)  <---------AHL20(1)  <---------AHL20(2)  --------->AHL20(2) ------->YAB1                   <---------------AGL15                                      --------->ATHB12 -------YAB1 <---------YAB1  <-----------GT1                      ---------->DOF2         <---------YAB1 ------AHL20(2)       <-----------GT1                        --------->AHL20(1)         --------->YAB1 ----->AHL20(2)     <---------WOX13(1)      --------->AHL20(2)  <<<<<<<<<MYB98         <---------YAB1 ----->AHL20(1)   --------->ATHB12     ----------->GT1  <---------AHL20(2)            --------->AHL20(2) ---->YAB1   <---------AHL20(2) --------------->AGL15   --------->AHL20(2)          --------->ICU4   ataataaaataaagttttattgattaacaattttcaatatacagaaaaaaatgtggattaaaatatgttaaagaataaaactgatcaatattatgatttg  16532000                                                                                          ---------->ID1                                                        <---------YAB1          ------->TEIL<--------             <---------AHL20(2)                     ----------->GT1   <-----------GT1    <-----------GT1         --------->AHL20(2)                       ---------->DOF2<---------CCA1(1) --------->AHL20(2)      <---------At4g35610      ------------------------>ANAC81   <---------RVE1(1) <---------AHL20(2)   gaaatggcagattatatatatgaataactagaaaatgaatagatggaaatgacaaagtataatttggatattttaccatatgtatataatttttcttttt  16532100                                              --------->CCA1(2)                                          <---------TOE2(3)                                       ---                                         ---------->DOF2                                         <---                                        <---------AHL20(2)                                      -----                                  --------->YAB1                        <---------WOX13(1)      -----                                 ----------->GT1                      --------->ATHB12          -----                                 <---------YAB1                       -------->HAHB4            <----                              <---------AHL20(2)               ------->GAMYB      --------->YAB1-----            --------->TOE2(3)<---------AHL20(1)               ----------->GT1    <---------YAB1 <----        --------->ETT(2)     --------->AHL20(2)     --------->TOE2(3)--------->ICU4        ----------  <-------TEIL               <---------AHL20(2)  ----------->RAV1(1) <---------YAB1  --------->AHL20(2)  ------->TEIL   <---------AHL20(2)     --------->AHL20(2)  --------->MYB52(1) --------->YAB1   <---- --DOF2 <---------ETT(2)     --------->AHL20(1)<-------TEIL<----------ID1     <---------YAB1   <-----   catgtacatgtctacataaatatttgaaaaatataatgaaaattaaagatacaacataaaaacaacgaaaaatgattgttcttataatgaaataaaagga  16532200                                                                            <-------MYC3                                                                            <-------PIF4                                                                            ------->PIF4                                                                            ------->MYC3     <------MYB83                                                                            <-------MYC2     <------MYB46(1)    <---------AHL20(2)                                                      ------->PIF5    <-------- --->ZmHOX2a(2)                                                             ------->MYC4    --------- ---ZmHOX2a(2)                                                              ------->MYC2    --------- ---->ARR14(2)                                                              <-------PIF5    --------- ---->ARR11(3)                                                            ------->TEIL      <-------- ---->GLK1(2)                     <----------DOF2                      --------->ANAC58     --------- -----ARR14(3)                    <---------DAG2                       --------->ANAC58     --------- ---->ARR14(3)                   <---------ANAC58                   ----------->HVH21      <--------P -----ARR11(3)                   <---------ANAC46              <---------------AtSPL8      <---------MYB55(1) >DOF2                      <---------MYB46(3)                <---------ANAC46            <-------GAMYB -----ARR14(2)        --------->GLK1(2)             <----------DOF2--------->SPL7    <---------ANAC58 -ZmHOX2a(1)    <-----------GT1  <---------ANAC58   <-------GAMYB<---------SPL7      <---------ANAC58   tcttgttttattgatttttttcagtttctgtagttgctttttaaaaattcagagcgttactgatgctggtacgacgcatgtgctagtgcttgggttggta  16532300  Previous    Next  AGI:  At2g39630.1    Description:  glycosyl transferase family 2 protein. similar to dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative [Arabidopsis thaliana] (TAIR:AT1G20575.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69209.1); contains InterPro domain Glycosyl transferase, family 2 (InterPro:IPR001173) Range:  from: 16528822    to: 16531765    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g39640.1    Description:  glycosyl hydrolase family 17 protein. similar to glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] (TAIR:AT3G55430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69211.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain X8 (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 16532164    to: 16534090    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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