Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <---------ANAC55(2)               --------->ANAC55(2)                    --------->bZIP60(1)               <------MYB46(1)                        <---------bZIP60(1)               <------MYB83                         --------->YAB1                          ---------              --------->MYB111(1)                ------>ZmHOX2a(1)                          <--------              --------->MYB59                   --------->TOE2(2)                           <--------      <----------DOF2                  <-------TEIL<---------YAB1                     --------->YAB1   --------->ARR11(3)                  ------->TEIL<---------ATHB12                  <---------YAB1   <---------ARR11(3)  *TSS         --------->ANAC55(2)                   --------->DAG2 --------->AHL20(2)  <---------CCA1(2) ----------->GT1 <---------ANAC55(2)                  ---------->DOF2<---------YAB1 -------->GT1 --------->MYB46(2)   <---------------AtSPL8         ----------->GT1  --------->YAB1 ---AHL20(2) <---------MYB55(1)    --------------->AtSPL8         <----------ID1  <---------YAB1 ->YAB1     <<<<<<<<<MYB98---------->DOF2  <-------TEIL          ----------->GT1  <---------ATHB12 -AHL20(2)  <---------MYB52(1)     --------------->AtSPL3      ---------->DOF2  ------>ZmHOX2a(1)   ttgtatatctttttgttaggtattgtataaaagctaatacgtacatacatcctatgatgacactgaaaaggaaaaaaaagtcctatgatgataatatatg  16495800                                                            <---------KAN4(1)                                                            --------->KAN4(1)                                                           <---------KAN4(2)                                                       --------->ANAC46                             <---------GLK1(2)         --------->ANAC58                             --------->ARR14(2)        --------->ANAC58<------MYB83                             <---------ARR14(2)        --------->ANAC55(1)                           --------->LBD16             --------->ANAC55(2)                          --------->HSFB2a(2)         <---------------------WRI1                         <---------LBD16              <---------LBD16  <------MYB46(1) >AHL20(1)            <----------DOF2             <-------TEIL   ---------->DOF2                    < -AHL20(1)         <---------ARR11(3)  --------->GLK1(1)   ---------->TaMYB80            <---------YAB1 -AHL20(2)         --------->ARR11(3) <------ZmHOX2a(1)<---------ANAC55(2)           <---------GLK1(2)   atgtcttcattcgtatttcaacatctttccggattttggaggaatccaaatgttcatacggaatattcaaagttggttttgaagtcagattgtcatggat  16495900                          <----------DOF2                 <---------RVE1(1)                 <---------CCA1(1)                <---------ARR14(2)                   <---------YAB1                --------->ARR14(2)             <-------TEIL                --------->ARR11(3)     ----------->HVH21                <---------ARR11(3)   --------->ANAC55(2)    --------->ANAC46      <---------DAG2   ------>ZmHOX2a(2)       --------->ATHB12 ---------AHL20(2)    <---------YAB1 <---------ANAC55(2)      <-------TEIL  --------->YAB1   atataaacgcagagaccagatattatgactttttgtgatatgtgatcggtccattttgtttggattcatagattggaatcatagactggtccagtttcaa  16496000                       --------->ATHB12                   <---------ARR11(3)                   <---------AHL20(1)                           <----------DOF2                   --------->AHL20(2)                         ------->TEIL                   --------->AHL20(1)                 <------MYB83             <-----------GT1                         --------->MYB46(2)        <---------ANAC58          --------->ATHB12   --------->MYB59        <---------ANAC58         <---------YAB1    <---------MYB52(1)      <---------DOF5.7(2)      <----------DOF2 ----------------->AGL1    <---------MYB52(1)<---------YAB1<---------WOX13(1)<------MYB46(1)    --------->DOF5.7(2)--------->ATHB51  <---------ANAC58   ------->GAMYB   --------->TOE2(3)  <---------AHL20(2) <---------ANAC58  <---------MYB52(2)             -----------   tttttcgttagcgttttacaaaatattattgggctttgattgggcttgggccagtttggtaacgaactttgttaaccaagtttggatgtaaacagaaaaa  16496100                                                                              <-------TEIL                                                                             --------->CCA1(2)                                                                             --------->GLK1(2)                                                                             --------->ARR14(1)                                                                            <---------ARR14(2) <-----                                                                            --------->ARR14(2)------>ZmHOX2a(2)                                                   *TSS---------->DOF2      <---------GLK1(2) =======              <---------GLK1(2)                    --------->MYB52(1)  <XXXXXXXXXXXXXXXXXXXXXMIR777  --------->ARR14(2)                    --------->ARR14(2)             <------NtERF2         ========  --------->GLK1(2)                     <---------ARR14(2) ----------->GT1----------->ARR10  <------ZmHOX2a(2)  <---------ARR14(2)         <---------ARR14(2) <---------ANAC58      ------>NtERF2         --------- >GT1     --------->YAB1     --------->ARR14(2) <---------ANAC58     <----------ID1         <--------   acaaaatccgaatcaaaattctcaaatagccgattttgagcaaattcgatgcttaacgaaagggtttaatggcgacgagattcgatgtgaagacgatcgt  16496200                                           <---------At4g35610                 <---------WOX13(1)----------->RAV1(2)         <---------GLK1(2)    <---------ICU4 <------ZmHOX2a(1)      --------->TOE2(3)  --------->At4g35610 ------HVH21<---------LBD16--------->REM1(1) =======HOX2a_HOX2a <---------ANAC58       <---------ZAT2         <---------AtLEC2 =======HOX2a_HOX2a <---------ANAC58    <---------At4g35610     <-----------GT1 >ARR14(2)<---------ARR14(2) <---------YAB1--------->ZAT2    <---------ICU4   ------->TEIL -ARR14(2)--------->GLK1(2)--------->YAB1<---------DEAR3(1) <---------DAG2 <---------ATHB12   caaggacaagagattctggattgcttccttcatcatcgtctgggctgctggtcttcaggtcaatttttgcatttccaatgaatttgttgattctagggtt  16496300                                                                                             --------                                                                                        --------->At4g35610                                                                                        <---------At4g35610                                                                        <-----------HVH21    --------                                                                     --------->LBD16    <------NtERF2                                                                    <---------LBD16     <---------ZAT14                                                             <---------ANAC46      --------->ALFIN1 -                                                             <---------ANAC58    <---------bZIP60(2)-                           --------->ARR11(3)                <---------ANAC58    <---------REM1(1) <-                           <---------ARR11(3)           <---------AHL20(1)       <-----------RAV1(1)<                   <---------At4g35610                  <---------AHL20(2)  --------->ANAC55(2)  ----    --------------------->WRI1                          --------->AHL20(2)  <---------ANAC55(2)  ----   ttcttacattgaaattttcgaagctcataaatctttgattttgaactaatttctgtaattaattcgtgttccagggtcacatgatgtggctgcagaagca  16496400                                                                <---------ANAC55(1)      ---------->DOF2                                           <---------ANAC55(2) ->ANAC58                                                       --------->ANAC55(2) ->ANAC58                                                       <---------ANAC58 -------->ARR11(3)     <---------HSFB2a(1)                      <---------ANAC58 -------->GLK1(2)      --------->MYB46(3)                <----------DOF2 --------GLK1(2)       --------->KAN4(1)           ----------------------->TaNAC69(2) ---------ARR11(3)    <---------KAN4(2)            --------->YAB1 ----->ANAC58   >>>>>>>>>CBP60g                   <-------TEIL<-----------GT1      <----------DOF2 ----->ANAC58   >>>>>>>>>SARD1          --------->AtMYB61<---------DAG2        <----------DOF2   agaatctttcaagcagaaatttggaacaatcgatgaagacgaccacaagtgattcatgactttattacgtctctgaaactgctttctttttttgtatttg  16496500                                            --------->GLK1(2)                                    --------->YAB1                                   <---------ATHB12                                <---------AHL20(2)               <---------MYB46(3)                                --------->AHL20(2)               ----------->GT1                   <-                ----------->ARR10<-----------GT1           >>>>>>>>>>>>>>>>>LFY                    <-            <---------ZAT6     <---------AHL20(2) <---------ANAC58                              <----        <------ZmHOX2a(1)      --------->AHL20(2) <---------ANAC58                            -------      <---------TOE2(3)<---------AtLEC2    <---------GLK1(2)    <---------ATHB12             <-------   tgagtcttgaggaagagttagatttgtatgaaatttaatcatacagactctggcttactatctccaatggttaatttgccaaatgctagtagtttttgat  16496600                                                         <---------ZAT14                                                         --------->ZAT18                                       --------->At4g35610 --------ANAC58           <---------AHL20(2)             --------->ZAT14         <---------ZAT6 --------ANAC58          --------->AHL20(2)              <---------ZAT18       --------->YAB1       < -----WOX13(1)         --------->ARR11(3)             <---------ANAC46    <----------DOF2           - -->ATHB12             <---------ARR11(3)      <----------DOF2     <---------HSFB2a(2)           <--- --YAB1              <---------TOE2(3) <---------At4g35610         --------->HSFB2a(2)     ------>ZmHOX2a(1)   tgctagagatgtctctgtattttgagattttatagtatttcagcttgagctttgtttagtggactagttcgagatgctttatagtgatacttcctctcag  16496700  Previous    Next  AGI:  At2g39490.1    Description:  F-box family protein. Identical to F-box protein At2g39490 [Arabidopsis Thaliana] (GB:Q5S4V7;GB:O80636;GB:Q8H1M8); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G61330.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68497.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 16493980    to: 16495723    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g39500.1    Description:  similar to Os01g0974800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045558.1); similar to hypothetical protein OsJ_004838 [Oryza sativa (japonica cultivar-group)] (GB:EAZ15013.1) Range:  from: 16496151    to: 16496666    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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