Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <------ZmHOX2a(1)                                                                 --------->YAB1                                    <---------ZAT14              <---------ICU4            ----------                                    --------->ZAT14           --------->YAB1              --------->YAB1                                <-----------GT1           ===========================================  ---------->DOF2               --------->ZAT6            ----------------->AGL3      --------------- ------GLK1(1)            <---------ZAT6 --------->ANAC46 ----------------->AGL2     ---------------- ----->GLK1(1) ----------->GT1 <---------YAB1           <------ZmHOX2a(1)          --------->ANAC46   attccaaagaagaccagaagtgaaattagtgttatcactatactcccaacaatgaacaggaccataatcaggacctgagtaatacaatccactaatagca  16353300                                                                            ------>ZmHOX2a(2)                                                                           <------ZmHOX2a(2)                                                                          --------->ARR14(3)                                                                          <---------ARR11(3)                                                                          --------->ARR11(3)                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                                          <---------ARR14(3)                                                                         <------ZmHOX2a(1)             <---------HSFB2a(2)                                        --------->HSFC1(2)    --------->ATHB12                                           --------->GLK1(2)                   --   <---------YAB1   --------->WOX13(1)                        <---------GLK1(2)                    --   --------->ICU4--------->ANAC58                             --------->ARR14(2)        ----------->RAV1(1) --------->YAB1  --------->ANAC58                             <---------ARR14(2) <---------TOE2(3) -- >DOF2<---------WOX13(1)                     ---------->DOF2----------->ARR10    <---------TOE1(3)--- =MADS_MADS  --------->HSFB2a(2)     --------->YAB1    ============================HOX2a_HOX2a ------ >AGL15   <-----------GT1         <---------ICU4       <------ZmHOX2a(1)<---------HSFC1(2)     ------ ->AGL3<---------MYB46(3)        --------->ICU4        ===========================HOX2a_HOX2a--------   caaacatgattgttaccagaagcaatctgtaagtaagaattatactgaaaagctcgaggaacgagattctcagaaggatcttcaaggttccaacaaaacg  16353400                                                                                                    <                                                                                                xxxxx                                                                                               <-----                                                                                             <------MYB46(1)                                             ---------->DOF2                       ----------->RAV1(2)                                           --------->LBD16                         <---------At4g35610      <---------ZAT6                     <---------LBD16                           --------->ZAT2   -      --------->ALFIN1                  --------->MYB52(1)               --------->LBD16     <------MYB83 ------->ANAC58                        --------->DEAR3(1)             --------->MYB52(1)     -------- ------->ANAC46                        <---------ALFIN1              --------->ARR14(2)      <------- ------->ANAC58                  --------->TOE2(3)                   --------->MYB52(1)      <------- ---->TEIL             <------NtERF2   --------->AtMYB61             <---------ARR14(2)     <-------- --->ANAC58          <---------ANAC46 --------->MYB46(3)           <---------KAN4(2) --------->ALFIN1 --->ANAC58     --------->MYB52(1)  --------->REM1(1)          <------ZmHOX2a(1)   <---------ZAT2  <- -->DOF2     --------->ANAC46    --------->TOE1(3)     --------->ATHB12<---------LBD16     <--------P   cacgcgaagtgttcgacgtaatggcgcagagaaaaccttcaccaccggaaagagaagtcattggaggagaataaccggagatttcacctgggggtcggtt  16353500       <--------P       <---------MYB52(1)     <---------MYB46(3)    ------>ZmHOX2a(2)    =====================HOX2a_HOX2a                                                       --------->ZAT2 -------->HAHB4                                         <---------WRKY12                   <---------ZAT2 --------->ATHB12                                     <-----------HVH21      --------->ARR14(2) ---------YAB1                                       <---------ANAC58       <---------MYB52(1) xxxxxxxxxxx>smallRNA(i)      --------->At4g35610    <---------ANAC58  --------->GLK1(2)--------->At4g35610 -----DOF2                    <---------At4g35610    <---------ANAC46  --------->ARR14(2)  --------->At4g35610 -------->ICU4              --------->MYB46(3)   --------->TGA1a       <---------ARR14(2)  <---------At4g35610 --->GT1                  ----------->RAV1(1)    ===============================================bZIP_DOF --MYB46(3)   <---------ARR14(2)               <---------ALFIN1 <-----------RAV1(2)     <---------At4g35610 --DEAR3(2)   --------->ARR14(2)          <---------ANAC58      <------NtERF2<---------ARR14(2) -DEAR3(1) <---------ZAT6 --------->MYB52(1)  ----------------->AG--------->At4g35610   <---------ZAT2 --------TOE2(3)  ------>ZmHOX2a(1)       <---------ANAC58    <---------ANAC46       ---------->DOF2   taatgatcggttagtgtttcctctatcccaacagatgacttcttgcttcccacttgcgtcaatggcgcagaagaatccgttttcgccgaaagctgctgcg  16353600                                --------->ATHB12                                --------->YAB1                                <---------ICU4                                -------->HAHB4                               <---------ATHB12                               --------->ICU4                       --------->GLK1(2)                      --------->ARR14(2)                 --------->ANAC58                               --------->CCA1(2)                   <                 --------->ANAC46                      ----------->TGA1                        <-----                 --------->ANAC58 <---------YAB1     --------->YAB1              <----------DOF2  ---                --------->SPL7 <---------YAB1        <---------ICU4         <-------GAMYB<---------MYB46(3)              <---------SPL7 --------->YAB1         <---------YAB1          <---------ANAC58   <-----      <-------GAMYB   <---------ARR14(2)            --------->ICU4          <---------ANAC58   ------   attgtgcctgttgagccatacgcagaaactgtaatgatgagtgatgaaatggtgatgatgacgaagatgtgagaattgggttgcattttggtgtttgagc  16353700                     <---------WOX13(1)          <---------LBD16     >>>>>>>>>TBF1   ------->TEIL    <--------ATHB1                                               --------->ARR14(2) ---------YAB1     --------->ATHB12        ------>ZmHOX2a(2)                    --------->ARR11(3) ----At4g35610    <---------YAB1           *TSS      <------------CBF  <---------YAB1 ------>At4g35610 --------->ICU4     --------->GLK1(2)<---------WOX13(1)        <---------ARR14(2) ----ZAT2<---------ANAC46  >>>>>>>>>TBF1 <---------AGP1  <---------ANAC46 ------->TEIL --->At4g35610 ------------>ATHB5>>>>>>>>>TBF1      --------->ATHB12  <---------TOE2(3)             -   tgatgaatgttttggggagaatgattgaagaagaagaagaatcgatctgagaggtgattgagtagacatgttaatgaatgcagttcttgttttgtttttt  16353800                       <------------CBF                      --------->ATHB12                      --------->ATHB51                      -------->HAHB4                      <--------ATHB1                      <---------ICU4                     <---------ATHB51                     --------->ATHB12                     <---------YAB1                      <-------TEIL                   <---------ICU4                     --------->HSFC1(2)                   --------->YAB1                     <---------HSFC1(2)                  --------->ICU4                      <---------HSFB2a(1)                  <---------YAB1                 <---------HSFB2a(2)                --------->YAB1                   --------->HSFB2a(2)             --------->YAB1       --------->At4g35610<---------TOE1(2)             ----------->GT1      <---------At4g35610<---------TOE1(3)           <------------CBF       <---------ZAT2 --------->LBD16                             <-------       --------->YAB1--------->ICU4          <---------RAP2.3(3)                           <--------- --------->DOF2<---------YAB1   --------->ZAT18<---------LBD16                      --------->ANAC55(2)   gtaaaagaataaaaattgtaataataattggaagtgagctgtttatgtctgcgcgaaggttcattggagagagacagtccaagtttacatattggtcagg  16353900                                         <---------AHL20(2)                                         <---------YAB1                         --------->SPL7                                        --------->AHL20(2)                      --------->SPL1(2)                  --------->ANAC58    <---------YAB1                           <---------SPL1(1)                  --------->ANAC58    --------->ICU4                           --------->SPL1(1)             ------>MYB83  --------->AHL20(1) <---------AHL20(2)              <---------SPL7  <------           <---------MYB46(2)       <---------ICU4                          <---------------AtSPL3           <---------------AGL15   <---------ATHB12                        <------------------SPL14           <---------MYB59 <---------AHL20(1)--------->AHL20(2)   <---------AHL20(2)    --------->AHL20(2)          ----------------->AGL1<---------AHL20(2)               --------->AHL20(2)     <---------AHL20(2) ----RAV1(2) ------>MYB46(1)   --------->AHL20(2)                <---------AHL20(2)   <----------DOF2 --HVH21<-----------GT1 --------->AHL20(2)  <---------YAB1<---------AtLEC2--------->GLK1(2) <--------   gagatggaatttaccaaaccaagaaaaaaaatattaaatcatttttattatatagtttttgtatgaaataaatgaaattctgtacggactttaattttga  16354000                                                                                      <--------------                                                   <---------AHL20(2)              --------->ICU4                                      --------->ANAC58                             <---------YAB1                                      --------->ANAC58                        <---------ANAC55(1)                                     --------->ATERF1(1)                      --------->ANAC55(2)                                     <------NtERF2 --------->AHL20(2)         <---------ANAC58                                    ------>NtERF2  --------->AHL20(1)         <---------ANAC58                                    <---------ATERF1(1)                       --------->ANAC46    <------ZmHOX2a(1)              <---------RAP2.3(3)                     --------->TOE2(2)   --------->ICU4     <---------AHL20(2)          --------->AHL20(2)      --------->YAB1 ---YAB1         <---------MYB52(1)<---------DEAR3(1)          ---------->DOF2<---------ANAC55(2) -ICU4     <---------GLK1(1)       <---------RAP2.3(2) --------->YAB1    <---------ATHB12  <---------   ctgtgaggattagagctctgttatgttattggaaatggcgacgcattacaaaaaaaattatactctaaagtccaaatcatacgtgattatcgaatgtggc  16354100                                                                        --------->ANAC46                                                                  <---------------AGL15                                                                  --------------->AGL15                                                     ----------->GT1    --------->ANAC58                                                  <---------STY1(2)     --------->ANAC58       <---------ANAC46                     <---------ZAT18    <-----------GT1 ---AGL1        ----------->GT1             --------->ZAT18--------->AHL20(2) --RAV1(1)      --------->YAB1         ---------->DOF2     <---------AHL20(2)    <---------TOE2(3)   atactaattttgtgtaaatgataaaaacaattcagtgtttttaaagtgtgctagatagttataaattactatataagcaaattaaggcaaatgtttttca  16354200  Previous    Next  AGI:  At2g39180.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G09780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18149.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68964.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69888.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain TNFR/CD27/30/40/95 cysteine-rich region; (InterPro:IPR001368); contains Inter Range:  from: 16351229    to: 16353743    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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