Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->HSFB2a(2)                                                                      <---------HSFB2a(2)          <-                                                                   <----------DOF2             <-----                                                                  <---------ANAC58           --------         --------->At4g35610                                      <---------ANAC58        -----------  ------>ZmHOX2a(1)                                         --------->ATHB12      --------->GLK1(2)-- <---------MYB59 <----------DOF2                       <---------ANAC58           --------->ARR14(2) ---------GT1 <---------ARR11(3)                       <---------ANAC58           <---------ARR14(2)   tatcctaactcatcagcatctttagcatcaagttcaactaaacaagtattcatgttttcgtttcattggcttttagaagatgagaatccatttagttata  16175500                    <---------ZAT14                    =================HOX2a_HOX2a                    ===================================HOX2a_HOX2a --------->TOE2(3)                    <------ZmHOX2a(2)                      --------->ANAC55(2)             --------->MYB46(2)                       --------->HSFB2a(1)             --------->MYB111(2)                      <---------HSFB2a(1)             <---------MYB46(3)                       <-----------RAV1(1)             --------->MYB111(1)                   <------ZmHOX2a(1) --------AHL20(2)  --------->ARR11(3)     --------->DAG2   <---------ANAC55(1)                    --- ----YAB1 ------------>MYB.PH3(2)        ---------->DOF2   <---------ANAC46              --------->ANAC46 ->YAB1  <---------TOE2(3)            --------->At4g35610  <---------ANAC58              --------->ANAC58 >GT1    <---------TOE1(3)    ------>ZmHOX2a(1) <------ZmHOX2a(1) --------->REM1(1)      --------->ANAC58 ------->AHL20(2)--------->MYB59      <---------At4g35610  <---------ANAC58     --------->At4g35610<-   atttaaaacttaaggtagttagatcactggtcctactagcagctaaagtaggaggaatgttgcgtcttacatcaacgatagaagatgactcaagcaagag  16175600                                             --------->ANAC55(2)                                             --------->ANAC58                                             --------->ANAC55(1)                                             <---------O2                                             --------->ANAC46               --------->ANAC46          <-----------GT1               --------->ANAC58     <---------RVE1(1)                                    <------MYB83               --------->ANAC55(2)  <---------CCA1(1)                                    <------MYB46(1)               --------->ANAC58 <---------TOE1(2)                                       --------->MYB59            <------ZmHOX2a(2)  ------>ZmHOX2a(1)                                    <---------MYB46(3)            ==========================HOX2a_HOX2a                                <----------DOF2           --------->ARR11(3) --------->TOE1(2)     --------->HSFB2a(2)         <---------ANAC58          <------ZmHOX2a(1)   --------->TOE2(2)     <---------HSFB2a(2)     <---------ANAC58     ----   <---------ANAC55(2)    <---------ANAC58   --------->ANAC58      <----------DOF2 <---------AtMYB61 ------>ALFIN1 <---------ANAC55(2) --------->ARR11(3) ---------->DOF2       <---------ANAC58  ------- ----------HVH21          <---------ANAC58   --------->O2         <---------DAG2<---------ANAC58<----   gtgtcacatgaaggatcacgaaatatttgcttcctacgatattttacacgtcttctcaaagtttctcacctttacattgtttgctttggttcggtttaga  16175700                                                            --------->GLK1(2)                         ----------->GT1            <------MYB83        <---------At4g35610                         <------MYB46(1)                     ----------->GT1       <-----------RAV1(1)                 --------->ARR14(2)          <---------At4g35610    <----------DOF2   <----------DOF2      <---------ARR14(2)         <-----------RAV1(1) ----->GLK1(2)        <---------DAG2 <---------ARR14(2)    <---------GLK1(2)         <----------DOF2- ---->ARR10      <-----------GT1     --------->ARR14(2)  ----------->ARR10  <----------DOF2      ---- -----GLK1(2)<----------DOF2      --------->ANAC46 --------->MYB59 <----------DOF2   <---------DAG2 <   ttctctcttttgctgcttttatcacttttgtaaaactcgaaaccggttttggttcggtttagattctctcttttgctgctttgatcacttttgtaaaact  16175800                                                                                      ===============                                                                                      ------>ZmHOX2a(2)                                                                                     ================                                                                                     <------ZmHOX2a(2)                                                         <---------MYB52(2)------------>CBF                                                    --------->AtMYB61     --------->ANAC58        <--                                             <----------DOF2              --------->ANAC46        <--                                             --------->TOE2(3)  ------>MYB83        <---------ARR14(2)          <---------YAB1                  --------->ARR11(3)    ------>MYB46(1)     --------->ARR14(2)     <---------MYB52(1)                   <---------ARR11(3)  <---------MYB59     <---------YAB1 ---- -------->ARR14(2)                       --------->GLK1(1)   --------->MYB46(3) --------->YAB1   <--- ----->ANAC46   <----------DOF2          <---------GLK1(1)  ------->TEIL  --------->ANAC58       <--- ---------ARR14(2)   <-----------GT1   --------->YAB1   ------------------------>ANAC81 --------->LBD16   cgaaaccggtttttgattctttttttccttcgaaacttaaatgatatctttaaaccaaaacgaaccaaactaaatcacacaattacgatccggtttgaag  16175900                                                                              --------->HSFB2a(2)                                                                          --------->O2                                                                          <---------O2                                                                          <---------TGA1a                                                                          --------->TGA1a                                                                          ===========================                           --------->LBD16                          ------>ZmHOX2a(2)                 --------->GLK1(2)                                 --------->CCA1(2)             <---------TOE2(2)                                     <------ZmHOX2a(2)             <---------TOE1(2)                                    <---------AGP1           --------->LBD16<---------ANAC58                        --------->AGP1   <-----------RAV1(1)    <---------ANAC58                        <---------ARR11(3) =====================HOX2a_HOX2a                                 --------->ARR11(3) =====================HOX2a_HOX2a                                 --------->ARR14(2) -------CCA1(1) <---------GLK1(2)                                 <---------ARR14(2) -------RVE1(1) --------->ARR14(2)                               --------->GLK1(1) ----->ARR11(3) <---------ARR14(2)                               <---------GLK1(1)<---------GLK1(1) ------ARR11(3)*TSS <---------YAB1       ---------->DOF2   <-----------HVH21  <---------HSFB2a(2) ------ARR14(2)<------ZmHOX2a(1)         ===========================================bZIP_DOF   atattttgttgtccgtaggattctgattccgagtctctagttccaaagagaagagaacatctgtgagagatctgagacgtctggaaatgtgaagaaaaca  16176000           ------>ZmHOX2a(2)                                                =========================          --------->CCA1(2)                                                 ------>ZmHOX2a(2)          <------ZmHOX2a(2)                                                <------ZmHOX2a(2)         --------->AGP1                                                    ==========================         <---------ARR14(2)                                               <---------ARR14(3)         <---------AGP1                                                   --------->ARR14(2)         <---------ARR11(3)                                               --------->ARR14(3)         --------->ARR11(3)                                               <---------ARR14(2)        -         --------->ARR14(2)                   --------->ANAC58            <---------ARR11(3)        <        --------->RVE1(1)                     --------->ANAC58            --------->ARR11(3)       <-     ---------->DOF2                <---------ANAC46                    ----------->ARR10       <---- ===============bZIP_DOF        --------->GLK1(2)                ---------->DOF2         --------->ZAT14   aaaaaaaaaaagatctgagagagagagtttcgaaattctcgtgttcgtaagcaaaaatggtttgggagaaagagaagatcgtcggaagttgtatagtcgg  16176100              --------->ATERF1(1)              <------NtERF2             <-----------HVH21             ------>NtERF2             <---------SPL7        --------->SPL7      <---------SPL7     <---------ANAC46     <---------ANAC58     <---------ANAC58    <-------TEIL   <---------HSFB2a(1)                             <------MYB46(1) --------->At4g35610        --------->TOE2(3)                      <------MYB83 <---------At4g35610    <----------DOF2    ---------->DOF2        <---------TOE2(3) <---------ZAT2    <---------ZAT2        ------>ZmHOX2a(1)        --------->MYB59 --------->ZAT2<---------DEAR3(1)  <----------DOF2        <<<<<<<<<MYB98 =====HOX2a_HOX2a  <---------At4g35610  --------->TOE1(3) <---------MYB52(1)          <---------AtLEC2 =====HOX2a_HOX2a  --------->HSFB2a(1)  --------->TOE2(3)<-------GAMYB  <---------TOE1(3) -------->ARR14(2) <---------HSFC1(2)  ----------------->AGL1 <------ZmHOX2a(1) <---------ANAC58 ---------ARR14(2) --------->HSFC1(2)  ----------------->AG  <---------YAB1     <---------ANAC58 -----ZmHOX2a(1) <------NtERF2    <---------ICU4   --------->At4g35610  <---------TOE2(3)     <------ --NtERF2   --------->DEAR3(1) --------->REM1(1)   <---------At4g35610  --------->MYB59    <---------ANAC46   aggagctgcgttcgccgtcggagcttctttccttcatcttttccttaaaggtgagcttccgttaggattaggtttaggtttgtcttgtccatggcgcatt  16176200                                                                                               ------                                                                                               ------                                                                                       <---------ZAT18                                      <---------ANAC58                               <-------MYC2                                      <---------ANAC58                               <-------MYC3                                   <--------P                                        ------->MYC3                                  <-------GAMYB                                      ------->MYC2                                 <---------MYB46(3)                                  ------->PIF5                                 <------MYB46(1)                --------->ZAT14      <-------PIF5                                 <------MYB83                   <---------ZAT14 --------->ANAC58                          <---------AtLEC2        --------->ZAT18            --------->WRKY18(1)                    <---------ANAC46  <---------ANAC46       --------->At4g35610--------->ANAC58 ----DOF2  --------->GLK1(2)    <---------AtMYB61 <---------ZAT18    ------->GAMYB<------------OsbHLH66   ttgagaaaacgaaaacctgttcgcgtttacatggatggttgcttcgatatgatgcactatggccactgcaacgctcttcgtcaagctcgtgctctcggtg  16176300                                                         <---------MYB52(1)           <---------DEAR3(2)                          ------>ZmHOX2a(1)          <---------DEAR3(1)                         ----------->RAV1(2)         <------NtERF2                      ---------->DOF2       <---------MYB46(3)                  --------->MYB46(3)       <---------DEAR3(1)                ----------->RAV1(1)    ------>ZmHOX2a(1)  <----------DOF2 --->WRKY38(1)                           ========================RAV    ---------->DOF2--------->HSFB2a(2) ----->HVH21                      --------->YAB1<------ZmHOX2a(1)     <---------YAB1   <---------HSFB2a(2)   accaattggtcgtcggtgttgtttccgacgaagaaattatagccaacaaaggacctcctgttactcctcttcatgaaaggtttctctttctcgagattac  16176400  Previous    Next  AGI:  At2g38660.1    Description:  tetrahydrofolate dehydrogenase/cyclohydrolase, putative. similar to tetrahydrofolate dehydrogenase/cyclohydrolase, putative [Arabidopsis thaliana] (TAIR:AT4G00620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65246.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Tetrahydrofolate dehydrogenase/cyclohydrolase; (InterPro:IPR000672) Range:  from: 16173036    to: 16175463    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g38670.1    Description:  PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1); ethanolamine-phosphate cytidylyltransferase. similar to cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putative [Arabidopsis thaliana] (TAIR:AT2G32260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45345.1); contains InterPro domain Cytidylyltransferase; (InterPro:IPR004820); contains InterPro domain Cytidyltransferase-related; (InterPro:IPR004821); contains InterPro domain Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729) Range:  from: 16175915    to: 16178996    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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