Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------TGA1a                                                                      ===============================                                                                      --------->O2                                                                      --------->TGA1a                           ------>NtERF2                              <---------ANAC46       -------- -------->ANAC58       --------->ANAC58                               <---------bZIP60(1)    <------- -------->ANAC58       --------->ANAC58                               <---------O2--------->TOE1(2) ------SPL7            --------->ANAC46                            ----------->TGA1         <-------- ------->HVH21         ----------->HVH21                           ----------->HVH21     ------>ZmHOX2a(2) --->ALFIN1            --------->bZIP60(2)                   ==================================HOX2a_HOX2a ---LBD16              =============================================bZIP_DOF   --------->GLK1(2) -->LBD16              --------->O2                      =======================bZIP_DOF<------ZmHOX2a(2) --ANAC46              <---------O2         <------ZmHOX2a(1)<------ZmHOX2a(1) --------->ARR14(2)   < --ANAC58              --------->TGA1a   <------ZmHOX2a(1)   ===================================HOX2a_HOX2a --ANAC58     <------ZmHOX2a(1) <------ZmHOX2a(1)        ---------->DOF2       <---------ARR14(2)----   ggacggaacaagtagaggaagagccacgacgcgaggagacagaggaggaagacgagagagaaaggatgagtgacgagagagaatccgacgatcgctgtag  16077300                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                               ------                                                                                             ------>ZmHOX2a(2)                                                                                             ========                                                                                            =========                                                                                            <------ZmHOX2a(2)                                                               <------ZmHOX2a(2)           --------->ARR14(2)                                          --------->CCA1(2)   <---------ARR14(2)           <---------ARR14(2)                                         <---------ARR14(2)  --------->GLK1(1)           --------->HSFC1(2)                                         --------->ARR14(2)<------NtERF2                 ----------->ARR10                                       --------->LBD16   <---------DEAR3(1)              --------->HSFB2a(1)                                      <---------ANAC46   <---------ANAC46                <---------HSFB2a(1)      ----------->GT1                 <---------ANAC58 <-----------HVH21              <---------SPL7 ==bZIP_DOF                           <---------ANAC58--------->DEAR3(1)             --------->LBD16 ->ZAT14                             <---------LBD16 --------->At4g35610            <---------ANAC55(2) --ZAT14        --------->TOE1(3) <---------ANAC58--------->ZAT2                    --------->ANAC46 --DOF2      <-----------GT1      <---------ANAC58--------->At4g35610 <---------TOE2(2)  <---------HSFC1(2) ---------DEAR3(1)              --------->ICU4    <---------At4g35610<-----------RAV1(2)<---------KAN4(2) ------->HVH21  --------->TOE2(3)<---------ICU4---------->DOF2--------->ARR14(2)   <---------LBD16 --   cgacggtgaggtaattaaccttgaaatacgagtaattcttgcggatacgaacagcagcgtcggagatcgactcaggtttggataatgcggaacgatccgc  16077400                                                                                                    <                                                                                                   --                                                                                                -----                                                                                           <---------MYB46(3)                                                                                           --------->MYB55(2)                                                                                          --------->ALFIN1                                                                                          <---------AtMYB61    --------->At4g35610                              --------->ATHB12                    <---------MYB52(1)    <---------At4g35610                             <---------YAB1                     ==============  ---------->CDC5                                 <---------At4g35610                  <---------DEAR3(1) --------ZAT2                               <---------ANAC46             --------->At4g35610<-------GAMYB --------At4g35610                       <---------ARR14(2)        <---------ANAC55(2) ============== ------->ZAT2<---------DEAR3(1)          --------->ARR14(2)       <---------LBD16      ------>ZmHOX2a(2) --->LBD16 <------ZmHOX2a(1)        --------->MYB52(1) <---------WOX13(1)<---------ZAT2<---------MYB46(3) =================HOX2a_HOX2a       <-----------GT1------>ZmHOX2a(2)--------->LBD16   =============== =================HOX2a_HOX2a      <-----------GT1--------->At4g35610 ---------->DOF2 <------ZmHOX2a(2) ------->At4g35610             <---------MYB52(1)<---------ARR11(3)<---------ANAC46   ===============   gagctcagcccaaggacgacgcttagagagaccgtttttaacggtttcggtgatctgattgatgaaattgcggaaagctggagtagcgatcggtggttga  16077500                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                                <----                     <-------GAMYB                                                              <----                     <------NtERF2                                     --------->ANAC58         <----                    <---------MYB46(3)                               ================================                    <---------SPL7                                   <------ZmHOX2a(1)          -----                   <---------ANAC46                                  =====================HOX2a_HOX2a                 <---------RAP2.3(1)                                 ================================                --------->ALFIN1                                   <---------TOE2(3)            -----                --------->ATERF1(1)                             <----------CDC5               -------               --------->At4g35610                             <---------At4g35610         <------MYB83         <------ZmHOX2a(1)                                  <---------MYB46(3)             <------MYB46(1)   <---------LBD16<------NtERF2                            --------->ALFIN1                <---------ANAC46 ----------->HVH21<---------LBD16                          <---------AtMYB61              --------->MYB111(1) -------TEIL  --------->ALFIN1                             <-----------RAV1(1)            --------->MYB59 ------->CCA1(2)<---------DEAR3(1)                         <---------DEAR3(1)             --------->MYB111(2) ------>ARR10<------ZmHOX2a(1)                            ----------------------->TaNAC69(2) <------- ===================HOX2a_HOX2a                      =====================================HOX2a_HOX2a ===============HOX2a_HOX2a                  <---------ARR14(2)--------->At4g35610 <------ZmHOX2a(2) ===============HOX2a_HOX2a           <---------ARR14(2)--------->ALFIN1          --------->ARR11(3) ===================HOX2a_HOX2a   <---------LBD16    <------ZmHOX2a(1) --------->ANAC58   --------->MYB46(2)   gattcgacggaggaaggagcggcggatggaacggtttggggattggagattgggaggactggtggtgctgaggaagccattggagatcaagtttggtaga  16077600                                                           --------->AHL20(1)                                                           <---------AHL20(1)                                                           <---------AHL20(2)                                                           --------->AHL20(2)                                                        --------->YAB1                                                      <---------WOX13(1)                                                   <---------YAB1                                                  ------>ZmHOX2a(2) --->ZmHOX2a(2)                                   ================================HOX2a_HOX2a ---ZmHOX2a(2)                                   <------ZmHOX2a(2) ----->CCA1(2)                                   =================================HOX2a_HOX2a ---->AGP1                                       --------->CCA1(2) -----ARR14(2)                                  <---------ARR11(3) -----ARR11(3)                                  --------->ARR11(3) -----AGP1                                      --------->AGP1  ---------->DOF2 ===HOX2a_HOX2a                                 --------->ARR14(2) ---->ARR11(3)                                  --------->ARR14(3) ====HOX2a_HOX2a            --------->ARR11(3)  <---------ARR14(3) ---->ARR14(2)       <-------GAMYB              <---------ARR14(2) *TSS    <------ZmHOX2a(1) ---->ARR10        <---------TOE2(3)            <---------AGP1 <---------AHL20(2)                <--- -P---------->DOF2 <---------TOE1(3)          ----------->ARR10--------->AHL20(2)           <--------   tctgagaaagagagaagaattagggttgaagaaattgaagaattgggcaagatctgattaataaattaaagagggaaggagagatagatttgttttatat  16077700                                                   ----------->RAV1(1)                                                  --------->At1g77200                                                  --------->DREB2C(2)                                                  --------->DEAR3(1)                                               <---------WRKY38(1)                                  --------->MYB52(2)------------>CBF                         ------>ZmHOX2a(1)     <---------WRKY12                             <--------                      ------>MYB83<---------ANAC58--------->DEAR4(1)      <----------DOF2 <--------HAHB4                      ------>MYB46(1)        <-----------HVH21            <---------DAG2  --------->YAB1                    <---------MYB59       <---------ANAC46  --------->ANAC46             <---------YAB1                 <---------WRKY18(1)     <---------LBD16    --------->ANAC55(2)  <<<<<<<<<MYB2   <---                --------->WRKY38(1)<-------GAMYB --------->DEAR3(2)    <-----------------AGL1<------- ------LBD16    --------->WRKY12  <---------ANAC58<---------ETT(1)     ---------->ID1  ------>ZmHOX2a(1) ---TBP    <------------CBF    <----------DOF2----------->HVH21     <----------DOF2    ==============   acgggtatgagaaaattgttgaccttcctatttctttcgttgctacgggtcaccgacaataaacgtgactcttttcctttttggttttcctattattatt  16077800             <---------------AGL15             --------------->AGL15            ------>ZmHOX2a(2)          <---------ARR11(3)          --------->ARR11(3)        <---------YAB1      <---------ICU4      --------->YAB1     --------->ICU4           <---------ANAC46     <---------ATHB51         <---------ANAC58  <---------AHL20(2)<------MYB83  --------->AHL20(2)<------MYB46(1) --------->AHL20(2)<---------TOE2(3)                                   --------->ARR11(3) -YAB1-------->HAHB4----------->GT1                  ---------->DOF2  <---------CCA1(2) ------AHL20(2)    --------->MYB59        ----------->GT1           --------->AHL20(2) --AHL20(2) <-----------------AGL3 <----------DOF2--------->TOE2(3) <---------AHL20(2) ==================HOX2a_HOX2a<---------ANAC58  <---------TOE2(3) <-----------TBP            --------   tgatttaattatgatctatattaggttaaatctcgtgttttagggagataaatgttaaagagttttatatttatatctattttttccaaaattttaaaag  16077900                                     ----------->GT1                                     ------->GAMYB                                    <------------MYB.PH3(1)                                  --------->MYB52(1)                     <---------AHL20(1)                     <---------AHL20(2)                     --------->AHL20(2)       <---------YAB1                     --------->AHL20(1)     <-----------GT1        <---------TOE2(3)                    --------->AHL20(2)--------->At5g28300          <---------TOE1(3)             <------------CBF   --------->DOF5.7(2)          --------->AHL20(2)           --------->AHL20(1) <---------------AGL15        --------->ARR11(3)           <---------AHL20(1) --------------->AGL15        <---------ARR11(3)           <---------AHL20(2)<-----------------AG      --------->YAB1          --------->AHL20(2) ----------------->AGL1<---------AHL20(2)                  --------->YAB1          --------->YAB1     <-----------------AGL1--------->AHL20(2)                 <---------YAB1    ------->TEIL<---------AHL20(2)<---------DOF5.7(2) <---------ATHB12        <-------TEIL        <-- -->DOF2 <---------YAB1      ----------------->AG --------->AHL20(2)   --------->MYB52(1)<---------YAB1   tgaatgaaactattatattgaattttatttttccgataacggtatattactatttaatcaagatttattaaggtaatggatacattctatgatttttgga  16078000                            <<<<<<<<<<AtMYC2                            --------->ANAC55(1)                                                   <--                            <---------ANAC55(2)                                                   <--                            --------->ANAC55(2)                                          --------->ANAC55(2)                            --------->ANAC58                                             ============                            --------->ANAC58                                             --------->O2                         --------->ARR14(2)                                          <-----------HVH21                         <---------ARR14(2)                                         --------->ANAC58                        <-----------HVH21                                           --------->ANAC58                       ----------->HVH21                                            --------->ANAC46                   <---------WRKY18(1)                                  ----------->HVH21<---------O2                  --------->WRKY38(1)                                 --------->At4g35610<---------TGA1a                  ----------->HVH21                                   <---------At4g35610<---------ANAC55(2)                  --------->WRKY12                          --------->YAB1         --------->SPL7 <--                <-------GAMYB         <---------MYB52(2)  --------->ANAC58         <---------TOE1(2)                <---------At4g35610  ------>MYB46(1)      --------->ANAC46       <---------SPL7<----- ----ZmHOX2a(1) --------->At4g35610  ------>MYB83         --------->ANAC58     <---------------AtSPL3   ggagcttatgttatggacagttgaccggacacgtataccaactaatctcatggtaatctcaagcaaaatcacagatgactgctcgtacgtcaagtgtctt  16078100                                       ---------->CDC5                                    <---------At4g35610                           --------->ARR14(2)                           <---------ARR14(2)                           --------->KAN4(2)                     --------->ICU4           --------->DAG2 --------->KAN4(1)                      <---------YAB1       <---------YAB1     <---------KAN4(1)                    --------->YAB1                      --     --------->YAB1       --------->HSFB2a(1)                 --------->ICU4                       <-    <---------YAB1        <---------HSFB2a(1)                 <---------YAB1                       -- -------ANAC46            <----------TaMYB80                --------->YAB1                     ------ -------ANAC58           ---------->TaMYB80                 <---------ICU4                  --------- =====bZIP_DOF           ----------->ARR10                 --------->ICU4                   --------- -------ANAC58   <------ZmHOX2a(1)  --------->At4g35610    <---------YAB1--------->YAB1     <-------- -----DOF2---------->DOF2<---------KAN4(2)      --------->ARR11(3)--------->ATHB12          ---------   tcgtttatgatgaaaagcaggactgggaatattctcttagctcagcctgagaacttggctcatgatgatgatttatcacaatcgcttcttagtcaagtaa  16078200  Previous    Next  AGI:  At2g38360.1    Description:  prenylated rab acceptor (PRA1) family protein. similar to prenylated rab acceptor (PRA1) family protein [Arabidopsis thaliana] (TAIR:AT3G56110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48788.1); contains InterPro domain Prenylated rab acceptor PRA1 (InterPro:IPR004895) Range:  from: 16076693    to: 16077667    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g38365.1    Description:  contains InterPro domain Protein of unknown function DUF537 (InterPro:IPR007491) Range:  from: 16078050    to: 16078499    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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