Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 ---------->DOF2                                 ------>ZmHOX2a(1)                          ----------->GT1                                     --------->TOE2(2)               --------->CCA1(2)                                              --------->TOE1(2)              --------->ARR11(3)                      ----------->HVH21    --------->GLK1(2)              <---------ARR11(3)                    <---------ANAC55(2)    <---------ARR14(2) -------  --------->ZAT18       <---------ZAT14             --------->ANAC55(2)    --------->ARR14(2)-------- ------>DAG2  --------->ARR14(2)      --------->At4g35610             ---------->DOF2 --------->YAB1 ------>DOF2  <---------ARR14(2)      <---------At4g35610      <------ZmHOX2a(1) ----------->HVH21   aaagcgagctatagaagatttgagagttcagaaaaaagagagcttaccgatgttatgtgacaataggattagtaaagaatcctgtgaagcataagaatga  15987600                                                                                         --------->WOX13(1)                                                           <---------AHL20(2)          <------ZmHOX2a(2)                                                          --------->YAB1              <---------ARR11(3)                         --------->ANAC58              --------->YAB1            --------->TOE1(2)                --------->AHL20(2)                    <---------YAB1            --------->ANAC58                <---------AHL20(2)                    --------->ICU4            --------->ANAC58            <---------ARR11(3)                     <---------YAB1         --------->HSFB2a(2) ---->GT1   <---------GLK1(2)                    ----------->GT1      <----------DOF2 --------->ARR11(3) ---------------->ANAC81 --------->ANAC58 ---------->DOF2<---------YAB1   <---------HSFB2a(2)   <----   aaaaaacacacacagattttaaataccaagtaatgagagatttagaaagagatgtgattataaaaattgaaactttttagaaacccaagatcaatgagat  15987700                                                        ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)                                                      <---------ARR14(2)                                                      --------->ARR14(2)                                                  <-----------GT1            --------->DAG2                                             ---------->DOF2     <---------ARR11(3)                                          <------ZmHOX2a(2)      --------->ARR11(3)              ---------->DOF2            <---------ARR11(3)     --------->GLK1(1)       -------------      <---------ICU4     --------------------->WRI1   --------->ARR11(3)    ---------->DOF2 -----YAB1-------->P     <----------DOF2 --------->ARR11(3)     <---------GLK1(1)   --------->LBD16>>   gataagaatacttaccaaaagtttgagctttgtgaaattcgaagatcaaaagttacgatctgggtgatatctgaagaaaaaagctccgaagagaagacga  15987800                                                        <-------MYC2                                                        <-------MYC3                                                   --------->ANAC58                                                   --------->ANAC58                                              ----------->HVH21                                             ------->MYC2                                             <-------MYC2                                             <-------MYC3 --------->REM1(2)                                             ------->MYC3--------->ALFIN1                                            <---------ANAC55(2)                                            --------->ANAC55(1)                                            <---------O2------->MYC2             <----------DOF2                                            <---------TGA1a             <---------AHL20(2)                                            --------->ANAC46           --------->ARR11(3)                                            ================================================bZIP_DOF                                            --------->ANAC58           <---------ARR11(3)                                            --------->bZIP60(2)        <---------AHL20(1)                                            --------->ANAC58           --------->AHL20(1)                                            --------->TGA1a           --------->CCA1(2)         <---- ----------->ANAC81                         --------->O2------->MYC3 --------->ARR11(3)      -------- >>>>>>>TBF1               *TSS             --------->ANAC55(2)     <<<<<<<<<RAP2.2 --------->AHL20(2)   agaagaacaagaacaagaacaagaacaagaacaaggtcgattacacacgtgacaagcatgtgtagggtttagatatatttgggctttaaaataagcccaa  15987900                                                                                     ------>ZmHOX2a(2)                                                                                   <---------ARR14(2)                                                                                   --------->ARR14(2)                                                                                   <---------AGP1                             <---------AHL20(2)                                    <---------ARR11(3)                             --------->AHL20(2)                                 --------->HSFB2a(2)                         <---------YAB1  --------->TOE2(3)                      <---------HSFB2a(2)                        --------->ARR11(3)                                     <---------LBD16     ---------->DOF2    <---------ARR11(3)------>ZmHOX2a(1)            <---------ARR11(3)    --------->AHL20(2)----------->GT1 --------->ARR14(2)              <---------CCA1(2)   <<<<<<<<<TBF1 --------CBF        ---------->DOF2   <---------ARR14(2)     *TSS   <----------DOF2--------->ARR11(3) ---->CBF        <---------YAB1---------->DOF2       <-----------GT1<---------DAG2<---------CCA1(2)   ttgaaattaaagcccaaatatgaaaagataattaaaagcctatcctaaaatcgtttttctactctcactgccttatcttcttctggatcttcttcttcga  15988000                            <------NtERF2                            --------->ATERF1(1)                           <-----------HVH21                          <---------bZIP60(2)                          <---------DEAR3(1)       ------>NtERF2                          <---------ANAC58         --------->LBD16                          <---------ANAC58 <---------ZAT2                          <---------ANAC46 <---------GLK1(1)                          <---------bZIP60(1)    <---------LBD16                          --------->bZIP60(1)   ------>ZmHOX2a(1)           ------>ZmHOX2a(1)                       <---------DEAR3(1)  --------->At4g35610           ------>MYB46(1)                      --------->ATERF1(1)  --------->GLK1(1)             ------>MYB83                    <---------DEAR3(1)     --------->ZAT2    <-----------HVH21       <---------YAB1                 --------->ANAC46          <---------At4g35610         <---------MYB59--------->YAB1              <---------ZAT14          --------->ANAC46     --------->DEAR3(1)   <-------GAMYB              --------->ZAT14         <---------LBD16     <---------At5g28300--------->MYB52(1)            --------->At4g35610<---------ANAC46<---------ALFIN1   <----------DOF2--------->At5g28300   acaaattcgaaaacagcacacggcgatggcgtcgcttatactcggagctcctccgcgagtcaccgtcgcattaccttcctcacggttatcatcttctcac  15988100                                                                --------->ZAT2          <---------MYB52(1)                                    <---------ZAT2         --------->LBD16                                        <---------At4g35610        --------->ATERF1(2)      --------->YAB1                 --------->At4g35610      --------->MYB52(1)  <---------ANAC58               ------>ZmHOX2a(1)                       <---    <------------AtMYB77  <---------ANAC58        <---------ALFIN1                            <------   tctgaaactgccggtgtctctctctcttgcttcactcatcaattctctctctccacttcctcatccagctcaattccactcggtaatctccctctcttat  15988200                             <---------DAG2                             <----------DOF2                       <---------bZIP60(1)                       <---------ANAC58                       <---------ANAC46                       --------->ANAC55(2)                       <---------ANAC55(2)     --------->ZAT14                       --------->bZIP60(1)     <---------ZAT14                ---------->DOF2      ==                       <---------ANAC58        --------->ZAT18     --------->LBD16                 --                       ----------->GT1         <---------ZAT18----------->HVH21                  <---                 <<<<<<<<<WRKY18     --------->ALFIN1         --------->WRKY38(1)            -------- --------->ZAT6  <---------WRKY12   <---------MYB52(1)    <------NtERF2       --------->MYB52(1) ==== ------MYB59   --------->TOE2(3)   --------->LBD16 <-----------RAV1(1)     --------->At4g35610 <----- ---CCA1(2)    <-----------HVH21 <---------LBD16 <---------ZAT14 <---------LBD16   ---------->DOF2 <-   ctaactctctcttaattcgtcaatggcgtaacttttccggtgttcgcagtgtactgtggcagaggtgaccggaaaacagctaaaggaaagcgtttcaatc  15988300                                        <---------ANAC58                                        ----------->GT1          ----------->GT1               <---------ANAC58 <----------DOF2                        <---------ANAC46  --------->ARR14(2) ==================================================MADS_MADS ------------->AGL15                    --------->ANAC55(2) --------------AG                ----------------->AG     <---------ARR14(2) ->WOX13(1)                   <----------DOF2      <----------DOF2                              <---- ==================================================MADS_MADS --------->ANAC58                  ------ ----ATHB12                <-----------GT1      <-----------GT1   --------->ICU4               <----- --------------AGL15--------->YAB1      <---------ANAC55(2)  --------->ANAC58         <----------DOF2   actcttttgggaatgtaagtaatcaaatttctctttccgatttcgtaattttactttgcaaattcgcaattttggttttgaatttggggtttatgtaagc  15988400                                                            --------->DEAR3(1)                                                            <---------ALFIN1                                                            --------->AtMYB61                                                           --------->MYB46(3)        --------->ANAC58                                   <---------ABI4(2)        --------->ANAC58                   --------->MYB52(1)                                   <----    ------>NtERF2                        <---------ZAT14 <---------ALFIN1                      <----- <---------ATERF1(1)              --------->LBD16   ------>ZmHOX2a(1)                          ------ -------RAV1(2)                 <---------LBD16 --------->ARR14(2) <------ZmHOX2a(1)   <------------- --->At4g35610                <------ZmHOX2a(1) <---------ARR14(2) ================================== ----At4g35610      ---------->DOF2    <---------------AtSPL3  --------->DEAR3(1)    <----------ID1   aggcgaggccaagaaacaagagcaaaggaagaggaccggagagagtaccggttcctccagcaccaccgaggaaagataagtttgagaacgacgagaagat  15988500  Previous    Next  AGI:  At2g38130.1    Description:  ATMAK3 (Arabidopsis thaliana MAK3 homologue); N-acetyltransferase. similar to GCN5-related N-acetyltransferase, putative [Arabidopsis thaliana] (TAIR:AT5G13780.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81031.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) Range:  from: 15985590    to: 15987827    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g38140.1    Description:  PSRP4 (PLASTID-SPECIFIC RIBOSOMAL PROTEIN 4); structural constituent of ribosome. Identical to 30S ribosomal protein S31, chloroplast precursor (RPS31) [Arabidopsis Thaliana] (GB:O80439); similar to unnamed protein product [Vitis vinifera] (GB:CAO15799.1) Range:  from: 15987961    to: 15988690    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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