Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->ANAC58                                                            --------->ANAC58                                                        --------->YAB1         --------->TOE2(3)                                                     ------>ZmHOX2a(1)  <-----------HVH21                                                     <---------------AGL15   <---------ATHB12                                              --------->AHL20(2)        --------->TOE2(3)                      --------->MYB46(3)      <---------AHL20(2)       ----------->GT1            <---------TOE2(3)                <---------AHL20(2)    <---------AHL20(2)         ------- -YAB1      <---------YAB1     <---------ANAC46 <---------CCA1(2) <---------ATHB12            -------   gtagattagaaactatggttagaaaccaccattgagtatgctcttaatttatatcctataacaagtcaataaatcgtcaaacattaatacgttgcattat  15979700                   <---------AHL20(2)             --------->TOE2(3)               <-----------HVH21           --------->ARR11(3)                <-----------TGA1           <---------ARR11(3)         <---------ANAC55(2)        --------->YAB1                --------->ANAC55(2)    <----------DOF2       <---------YAB1         <---------AHL20(2)      <---------MYB52(2)     --------->YAB1<---------ICU4    <-------TEIL--------->ANAC46                                   - -->ATHB51 <---------ARR11(1)--------->AHL20(2)  --------->ANAC58               ----------->GT1  ---- -->ATHB12<---------CCA1(2)  <---------AHL20(2)  --------->ANAC58     --------->At4g35610     <------   ttgtttgtcatcatatcttaaatatttcgaattaaatgatacgttttcgtcacacaactaatgctttttagtagatgaaatatagtaaaatacgatttta  15979800                      <---------YAB1                  <----------DOF2                 <---------ANAC58                 <---------ANAC46              --------->ALFIN1             ------->MYC3                                       <---------HSFB2a(2)             <-------MYC3          --------->ATHB12             --------->HSFB2a(2)            --------->PIF3(3)      --------->ATHB51            <---------LBD16            <---------TGA1a    --------->AHL20(1)            --------->GLK1(2)            <-----------RAV1(1)<---------AHL20(1)          --------->GLK1(1)            --------->O2       --------->AHL20(2)         --------->ARR14(2)            =================bZIP_DOF                     <---------ARR14(2)       ------->TEIL<---------MYB52(1)                    <------NtERF2                <---------YAB1 ------>TEIL<---------O2       <---------AHL20(2)       --------->LBD16              --------->AHL20(2) ----->ANAC55(2) <---------ANAC58 <---------YAB1       --------->RAP2.6(2)           --------->YAB1 ---AHL20(2)--------->TGA1a<---------AHL20(2)         <---------LBD16             --------->TOE2(3)<-   tgtattttgaacccatgtggcgttatgttttaatttattattggatagtagaagaagccggaaattctggatgtcaaatagtcacattaatattcaatgc  15979900                               --------->TOE1(3)              <---------ALFIN1            ----------->GT1    <---------MYB59               <---------At4g35610           --------->DAG2      --------->TOE2(3)           --------->ANAC46          ---------->DOF2     <---------ANAC55(2)         <---------At5g28300   --------->TOE2(3)       <---------MYB52(1)    <---------ANAC46                      <---------ANAC55(2)  <---------ANAC55(2)      --------->DOF5.7(2)   <---------ANAC58                    --------->AHL20(2)  ----------->GT1         <-------GAMYB          <---------ANAC58         --------->AHL20(1) --------ARR14(2)<---------At4g35610  ---------->DOF2    <-----------GT1  <---------AHL20(1)       --   gaaaacgtaaaaaaaagtaagatgctaccgttacctaaacaaaagttaatggtgtgattttacagcacctgtttaatatttttaaaattacataaaaaaa  15980000                                          ---------->DOF2                                       <---------AHL20(2)                                 ----------->GT1                      --------->HSFC1(2)                                 <------MYB46(1)           --------->ALFIN1                                 <------MYB83           <---------DEAR3(1)          ----------->GT1      <---------WOX13(1)   --------->ALFIN1  --------->HSFB2a(1)      ----------->GT1         <------------CBF   <------ZmHOX2a(1)    <---------HSFC1(2) -------->DOF2        ---------->DOF2  ----------->TBP <---------ANAC46*TSS                 <-------TEIL   ccaaagagaagtaagaaaaaatgaaaaagagagattggtatataaaaaggaggagtagggggtgaagcccgaagcatcttatagtatttttagcttcatt  15980100                                                      --------->ZAT14                                                      <---------ZAT14                                                      <---------ZAT18                                                   --------->At4g35610                                                   ------>ZmHOX2a(1)                                           <----------DOF2    <---------LBD16                    ----  <----------DOF2          ------>ZmHOX2a(1)    ------>ZmHOX2a(1)                           <--------   ccttcttttgctctgatcaaagtcttctccttcccttctctctctctttcctcctctgcacatttctgggttcttctcttcttatgctctgtttctttta  15980200                          --------->ARR11(3)                               <----------ID1                          <---------ARR11(3)                            --------->MYB52(1)                          <---------GLK1(2)                        --------->At4g35610                        <---------TOE2(3)     ---------->DOF2      <---------At4g35610                        ----------->ARR10----------->GT1           <---------ZAT2                   <               <---------ZAT14          --------->DAG2        ----------->HVH21                     < ----->ANAC46  --------->ZAT14 --------->TOE2(3)            <---------ANAC55(2)                  <--- --DOF2    <---------------AtSPL8      ---------->DOF2      --------->ANAC55(2)     --------->MYB46(3)   agacacagaagaaacagtacagagttgagattttcttaaacaaaagtgaaaagagaagaaacaagtgacagctcaaacggacaaaaaccactcttgggtc  15980300                                             <-----------GT1                                          --------->ANAC58          <---------GLK1(2)               --------->ANAC58        <---------YAB1                 --------->TOE2(3)      <---------At4g35610             <---------ANAC55(2)    <---------ANAC58                  --------->ANAC58    <---------ANAC58                  --------->ANAC58 ---------ANAC58         <---------------AGL15                       --------->ZAT6 ---------ANAC58         --------------->AGL15         --------->ZAT14   --------->ZAT14<---------ANAC55(2) -------DOF2  <----------DOF2        <---------------AtSPL3  <----------DOF2    ----------->GT1------   tttcttgcttctgattctttctcttctctaatagaagaaaacgtaagtcactctctctactctcttttttcacactgaagaagagaaaaaacgtgaacaa  15980400                                                         ------>ZmHOX2a(2)                                                        <---------GLK1(1)                 ------>ZmHOX2a(1)                                                        --------->GLK1(1)             <-----------GT1   <-----------HVH21                                    <------ZmHOX2a(2)   --------->ZAT18  ----------->GT1            <-----------GT1           <---------ARR11(3)   --------->ZAT14 ---->DOF2   <----------DOF2<-----------GT1            --------->ARR11(3)   <---------ZAT14   agaactgtcaattctctttccctctctgttttatcttcttgaattctccaagattgagatctctctcagtctcttatgtgctctgttttctcctctctgt  15980500                                                          ----------->GT1                                                     <---------HSFC1(1)                                                     --------->HSFB2a(2)                                                     <---------HSFB2a(2)                                                    ------>ZmHOX2a(2)                                                    ================================HOX2a_HOX2a                                                   =================================HOX2a_HOX2a                                                   <------ZmHOX2a(2)                                                  --------->AGP1--------->AHL20(2)                                                  <---------ARR14(2)                                                  --------->ARR11(3)                                                  <---------ARR11(3)                                                  --------->ARR14(2)   --------->ETT(1)                           <----------DOF2        <---------AGP1<---------AHL20(2)               --------->ANAC46        <---------AHL20(2) --------->At4g35610<------ZmHOX2a(1)        <-----------GT1<---------GLK1(2)         <---------CCA1(2)     <<<<<<<<<<AtTINY2           --   tttcacttagttactaaacacaatcgattctttcgctctgttttatttctcagatctagaagctaaaaaaatgtcggaaggagtagaagcgatagtagca  15980600  Previous    Next  AGI:  At2g38120.1    Description:  AUX1 (AUXIN RESISTANT 1); amino acid transmembrane transporter/ transporter. Identical to Auxin transporter protein 1 (AUX1) [Arabidopsis Thaliana] (GB:Q96247); similar to amino acid permease, putative [Arabidopsis thaliana] (TAIR:AT2G21050.1); similar to amino acid permease, putative [Arabidopsis thaliana] (TAIR:AT5G01240.1); similar to amino acid permease, putative [Arabidopsis thaliana] (TAIR:AT1G77690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15795.1); similar to Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) (GB:Q9FEL7); similar to hypothetical protein [Vitis vinifera] (GB:CAN72381.1); contains Inte Range:  from: 15980071    to: 15984258    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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