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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                   ---------->DOF2
                                 ------>ZmHOX2a(2)
                                --------->CCA1(2)
                                <------ZmHOX2a(2)
                               --------->AGP1                                       <---------ARR14(2)
                               --------->ARR11(3)                                   --------->ARR14(2)
                               <---------ARR11(3)                               --------->At4g35610
   <---------MYB46(3)          <---------AGP1                                   <---------At4g35610
  <--------P               ---------->DOF2                               --------->WOX13(1)
<---------MYB46(3)      --------->YAB1                                  <---------------AGL15
--------->ATHB12        =================================================================MADS_MADS
-------->ICU4           --------->TOE2(3)                              ----------------->AG<--------
---------ATHB12         --------->TOE1(3)                 --------->At5g28300---------->DOF2
--->ANAC58              --------------->AGL15            <---------DEAR3(2) --------->YAB1<---------AtMYB61
--->ANAC58             <---------YAB1   <----------ID1   ----------->GT1--------------->AGL15
--->AtLEC2           <-----------GT1  <---------ICU4------->TEIL       ----------------->AGL3     --
 
caatggttgatgagtcagaaaatgttaccataaagatctaaagatgacaaaaatgaacgtcggtaaaatggataaccaattagagcagacccagtggtct  15875100
                                                                                        --------->ATHB12
                                                                                      <---------WOX13(1)
                                                                                     <------------CBF
                                                                                    -------->HAHB4
                                                                                    --------->ATHB51
                                                                                    --------->ATHB12
                                                                                    <---------ICU4
                                                                                    <--------ATHB1
                                                                                   <---------YAB1
                                                                                   <---------ATHB12
                <---------YAB1  <---------ANAC46                                   --------->ICU4
              --------->YAB1    <---------ANAC58        --------->ARR11(3)         <---------ATHB51
           --------->YAB1       <---------ANAC58        <-----------GT1     --------->YAB1
-ZAT18  --------->TOE2(3)     <---------MYB46(3)      <---------AHL20(2)   <---------ATHB12        <
-------->DOF2 <-----------GT1--------->ALFIN1     --------->AHL20(2)     --------->WOX13(1)      ---
 
taaaagttgaacattaatcaccattcaccagagtggctggaagaaaattgacataaatttatcttgacatgaagtccaatcatctaataattgatttagc  15875200
           ---------->DOF2
        --------->ANAC58
        --------->ANAC58
        --------->ANAC46
      ----------->RAV1(1)
      <---------------AGL15
    ------->TEIL
    --------->SPL7
  <---------SPL7
 <---------ANAC58
 <---------ANAC55(2)
 <---------ANAC58
 --------->ANAC55(2)                         --------->ANAC58
<---------------AtSPL3                       --------->ANAC58
--------------->AtSPL3                    <------ZmHOX2a(2)
--------------->AtSPL8              <---------ANAC46                                              <-
<---------------AtSPL8   ---------->DOF2 --------->ARR11(3)                            --------->ANAC46
<---------------------WRI1      <------------CBF  --------->ICU4           ------------>CBF      ---
---------DOF5.7(2)     --------->ANAC58  <---------ARR11(3)      <----------DOF2       --------->ANAC58
------>DOF5.7(2)       --------->ANAC58 <---------GLK1(1)        <---------DAG2        --------->ANAC58
 
gataacgtaccacacaaagaagtggcaagaaagcgaattgtggagatcatgccattatcaagtgcaaactttttgacatccaatagacttaagccatttc  15875300
                     <---------ANAC46                                                   <-----------
              <----------DOF2                                                         --------->AHL20(1)
         <---------GLK1(1)   <---------AHL20(2)                --------->AHL20(2)     <---------AHL20(2)
         --------->GLK1(1)  --------->AHL20(2)             ------->GAMYB              --------->AHL20(2)
 --------->YAB1<---------MYB52(1)<---------ICU4           --------->ANAC55(2)        --------->AHL20(2)
<---------YAB1<---------------AGL15                       <---------ANAC55(2) ----------->GT1     --
--------ICU4  --------------->AGL15   ------------>CBF  --------->MYB52(1) --------->TOE2(3)   -----
------>ICU4  --------->TOE2(3)   --------->YAB1      --------->YAB1       --------->ATHB12     -----
 
attatcatatagatttcctttatttagtgtattaaatgatcaccaatgctgatcaagaataacggaataaataaacttcattagtaaaaaaaattggcaa  15875400
                                    --------->ZAT18
                          <---------------AGL15              ---------->DOF2
                          --------->TOE2(3)                  ======================================bZIP_DOF
                          --------->TOE1(3)               ------->TEIL            --------->ANAC46
                          --------->YAB1            --------->ICU4          <---------GLK1(1)
                          --------------->AGL15   <---------ICU4            --------->GLK1(1)   ----
                         ----------------->AGL3  <---------YAB1           --------->YAB1 --------->TGA1a
-CBF                --------->TOE1(3)       <---------At4g35610          <---------YAB1  <---------TGA1a
------->GLK1(2)     --------->YAB1  <---------ZAT18 <---------YAB1     --------->YAB1    <---------O2
---->ANAC58         --------->TOE2(3)   <----------DOF2<---------YAB1  <---------ICU4    --------->O2
---->ANAC58  <-------TEIL<-----------------AGL3  --------->ICU4       --------->ICU4   <-----------RAV1(2)
 
gaatttgaaccataggtccataaccataaccataaatagtgtgctttagatgatgattatgaatcaaaggcccattatgatatccaaggcccaagtgagt  15875500
                                                                                 ===================
                                                                                 <---------------AGL15
                                                                                 --------------->AGL15
                                                                                 --------->LBD16
                                                                                <-----------------AGL1
                                                         ----------->HVH21     ------>MYB46(1)
                                                       <---------At4g35610     ------>MYB83
                                                    --------->ZAT2           --------->AtMYB61
                                                    <---------At4g35610      <---------ALFIN1
                                                    --------->At4g35610      --------->DEAR3(1)
                              --------->AtLEC2      <---------ZAT2          --------->ANAC46
                          ------>NtERF2        --------->GLK1(1)          <---------ALFIN1
     <---------TOE1(3)   --------->ANAC46      <---------GLK1(1)      --------->At4g35610
     <---------TOE2(3)  --------->At4g35610  <------ZmHOX2a(1)     <---------ANAC58
--------->WOX13(1)    <---------RAP2.3(3)  --------->MYB59         <---------ANAC58     ----------->GT1
----->ZAT18   --------->AHL20(2)       <---------ZAT6  --------->At4g35610--------->REM1(1)   ------
 
gagcaattaaggcttcataaatttgtctgcgccattcaagtagagttaggatttcagctgctcacggctagcctgctacacctccccaattttgtaataa  15875600
                                                                                               -----
                                                                                               -----
                                                                                          <---------ARR14(2)
                                                                                 ------>ZmHOX2a(1)
                                                                               ----------------->AG
                                                                               <-----------------AGL1
                                                                           <---------HSFB2a(1) -----
                                                                           --------->HSFB2a(1) -----
                         --------->TOE1(3)                                 <---------ANAC58  <------
                  --------->HSFB2a(2)                                      <---------ANAC58<--------
      ------>MYB46(1)    --------->TOE2(3)                           <---------ANAC46     --------->ARR14(2)
      ------>MYB83--------->LBD16                    ---------->DOF2--------->At4g35610--------->LBD16
    --------->AtMYB61 --------->GLK1(1)         ----------->GT1     <---------LBD16   <---------LBD16
 <---------ALFIN1 <---------HSFB2a(2)   <----------DOF2    <------ZmHOX2a(1)   ----------------->AGL1
=================================================================================================MADS_MADS
--->YAB1 ----------->RAV1(2) --------->GLK1(2) --------->ALFIN1  --------->At4g35610 <---------LBD16
 
gaacacaccttcccctgtttccgagaaaccctaatctgaaaaactttgagatggggaaaagaggaagtagcagcgggagcgttcctattcggggatttac  15875700
                                                                                --------->SPL7
                                                                             <---------ANAC58
                                                                      --------->At5g28300  ---------
                                                                      --------->LBD16      <--------
     <-----------GT1                                                 ------->GAMYB        ----------
---->ANAC55(2)                              <---------MYB46(3)      <------------AtMYB77  --------->ANAC58
---->ANAC58                   <---------At5g28300  --------->YAB1  <---------At5g28300    --------->ANAC58
---->ANAC58          --------->MYB52(1)<------ZmHOX2a(1)          --------->MYB52(1) ----------->HVH21
---->ANAC46    --------->ANAC58      <---------ANAC46  <---------At5g28300   <---------ANAC58
-----GT1       --------->ANAC58   --------->ALFIN1 <---------ICU4<---------ATHB12  --------->At4g35610
-GLK1(1)   --------->GLK1(2) --------->MYB52(1)   <---------YAB1 --------->MYB46(3)<---------At4g35610
 
gaaacttgttacagaatcaagaaataagggattaactgtggaggagattgttgatgatcaccgttccaataaccgtgaatgcgttcggctgaaacgtcaa  15875800
   --------->ICU4
   <---------YAB1                                                                          <--------
>TOE2(3)              --------->YAB1               ---------->DOF2                       <---------At4g35610
---HVH21---------->DOF2       --------->ATHB12    <------ZmHOX2a(1)           --------->MYB52(1)
->GT1 <---------YAB1 <---------ATHB12     >>>>>>>>>TBF1            <------ZmHOX2a(1) <------ZmHOX2a(1)
 
accctcatgatcaaagtcaaacaaatcataaactcattgagcgaagaagaagaggaaagtgaaggaagtaggactaagaaaaaacagaggagagatgatt  15875900
                                                          --------->GLK1(1)
                                                         <---------ARR14(2)
                                                         --------->ARR14(2)
                                                       --------->LBD16
                                                      <---------HSFB2a(2)
        <---------GLK1(1)    <---------ICU4           --------->HSFB2a(2)
        --------->GLK1(1)   <---------YAB1     --------->REM1(1)                              <-----
<---------ZAT14           --------->YAB1   --------->At4g35610                               -------
--------->ZAT14       ------->TEIL <---------DAG2    <---------LBD16                         <------
-YAB1 <------ZmHOX2a(1)<---------CCA1(2)   <---------At4g35610                     --------->AtLEC2
 
cagaacagaggaattcggatttatgtatatcatcatcgccttattctgcttcatcatccggaaatgtattgacatcggaagataacatgcagtttgatgt  15876000
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AGI:  At2g37910.1   
Description:  cation/hydrogen exchanger, putative (CHX21). similar to CDC48C (EMBRYO DEFECTIVE 1354), ATPase [Arabidopsis thaliana] (TAIR:AT3G01610.1)
Range:  from: 15875477    to: 15876175    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At2g37920.1   
Description:  EMB1513 (EMBRYO DEFECTIVE 1513); copper ion transmembrane transporter. similar to DEAD box RNA helicase, putative [Arabidopsis thaliana] (TAIR:AT2G07750.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73407.1)
Range:  from: 15875658    to: 15877149    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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