Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->AtMYB61                                                                         ------>NtERF2                     ------>ZmHOX2a(2)                                  <---------ETT(1)                     ==============HOX2a_HOX2a                          ----------->HVH21                     ==============================HOX2a_HOX2a          --------->DEAR3(1)                   --------->ARR11(3)       ------>ZmHOX2a(1)   --------->ARR14(2)          ==================HOX2a_HOX2a  ---------->ID1       <---------MYB52(2)                -----          ------>ZmHOX2a(1) ------>ZmHOX2a(1)                 --------->ANAC58          <---------ARR11(3) -----ATHB12       <---------ARR11(3)<----------DOF2          --------->ANAC58    ------>ZmHOX2a(1)   gaatacttcatcctctccattgatcttctccttactctcctttgtcctcactaaaccccttgccacgaactgctccgacctctccttcaatttcttatac  15803700                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-          ----------->HVH21                 --------->HSFB2a(2)                                    --         <-----------HVH21           --------->ZAT14                                              <--        ------>ZmHOX2a(1)            <---------ZAT14<-----------GT1       ---------->DOF2       <---- ---->ANAC46             <---------YAB1  <---------YAB1               <---------ZAT6 --------->GLK1(2)   acaatttgtcctgtcacagtcaccatcaatattgaacagtgttcttatggaatttcacaataccacattgtagagataaagagagagaacctgttcttcc  15803800                                                --------->MYB52(1)                                               --------->ARR14(2)                                               <---------ARR14(2)                                              <------NtERF2                                             --------->LBD16                                           <---------LBD16                                           <------NtERF2                                           --------->ATERF1(1)                                           --------->At4g35610                                           --------->RAP2.3(1)                                           <---------At4g35610                                          <---------DEAR4(2)                                          <---------RAP2.3(1)                                          <---------ATERF1(1)                                          ------>NtERF2                                          <---------ERF1                                          <---------ORA47(2)                                          <---------RAP2.6(1)                                          <---------RRTF1(1)                                         <---------DEAR3(1)                                         --------->ALFIN1                                         <---------RRTF1(2)                                         <---------RAP2.6(2)                                         <---------RAP2.3(2)                                         <---------RAP2.3(3)                                         <---------ANAC46                                         --------->DEAR3(1)                                         <---------RRTF1(3)                                         <---------ATERF1(2)                                         --------->ATERF1(2)                                        <---------ABI4(1)                                        <------NtERF2                                        --------->ATERF1(1)                                       <---------RAP2.3(1)                                       <---------ATERF1(1)         <---------DOF5.7(2)           <---------ERF1        ----------->HVH21              <---------RRTF1(1)       --------->DOF5.7(2)            <---------RAP2.3(2)       <---------MYB52(1)             <---------DEAR3(1)    <------NtERF2                     <---------ANAC58   ------>NtERF2                      <---------ANAC58  <---------ALFIN1                    <---------ANAC46 <---------ABI4(2)                    <---------RRTF1(2) ---------ATERF1(1)              <---------MYB46(3)                                     <---------ANAC58 -----------HVH21              <-------GAMYB<---------ANAC46          <---------MYB52(1)<---------ANAC58 ------->DREB2C(2)             <---------At4g35610         <---------ARR14(2)           <---------ANAC46 ------->ANAC46             <-------TEIL------>NtERF2   <------------AtMYB77     <---------ZAT18 ------->ATERF1(2) --------->At5g28300<---------RAP2.3(3)  <---------GLK1(2)     --------->ZAT14 --------ATERF1(2) <-----------HVH21  <---------RAP2.6(2)  --------->ARR14(2)    <---------ZAT14 ------->DEAR3(1)<---------DEAR3(1)   <---------RRTF1(3)--------->MYB46(3)    --------->LBD16 -------LBD16   <---------ORA47(1)   <---------LBD16--------->At5g28300     <---------LBD16 -----ALFIN1   <------ZmHOX2a(1) <-----------RAV1(1)--------->DOF5.7(2)   <-----------GT1   accggcaccggtaacgaggacggtgagaggttcagttgttgcggcggcggaaacggtaaccgatactcttctgttttttccggtgaacttacttggacca  15803900                                                                                      --------->GLK1(1)                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                                                                   --------->LBD16                          --------->At4g35610                                    <---------LBD16                     --------->TGA1a                                           <---------ARR14(2)              ----------->HVH21                      <---------ARR14(2)        --------->ARR14(2)            --------->At4g35610                      --------->ARR14(2)       <---------At4g35610           <---------ARR14(2)                       <------ZmHOX2a(1)         <---------ZAT2           --------->ARR14(2)                <---------SPL7                   --------->ZAT2           --------->GLK1(2)                <---------MYB52(2)              --------->REM1(1)          <---------GLK1(2)              <----------ID1                 --------->At4g35610   <------     <---------ANAC46<---------TGA1a   --------->CCA1(2)      ---------->DOF2 --------->At4g35610  --   caaatcgacgtagaatctgacacaagtgagcgaaattggagagacgacgaacgaggaactgagacaaaggaagaagctacagctccggatttgtaagtgt  15804000                                          --------->ICU4                                          <---------YAB1                                      <-----------TGA1                                    <------NtERF2    --------->ATHB12                                   --------------------->WRI1       <---------At4g35610                                  <---------DEAR3(1) <---------WRKY18(1)   <------ZmHOX2a(1)             <------NtERF2      --------->WRKY38(1)<-----------RAV1(2) ---ZAT6   <---------MYB46(3)  <---------DEAR3(1)   --------->WRKY12--------->At4g35610 ------->At4g35610            <------NtERF2<---------ICU4      <---------YAB1   tagcaggaagtagtggatggaagaatgttgtcgtcgtcgtcgtcatcatcgccattgactggagtttgatagctcagacgaagaagacgagagagtgaga  15804100                               --------->TOE2(3)                               <---------DAG2                           --------->TGA2(2)                          <-----------HVH21                          <-----------TGA1                         --------->ANAC55(1)                         =======================bZIP_DOF                         --------->ANAC58                         --------->ANAC46                         --------->ANAC58                         --------->bZIP60(2)                         --------->ANAC55(2)                         <<<<<<<<<<HY5                         <---------bZIP60(1)                         --------->bZIP60(1)                         --------->O2                         <---------O2                         --------->TGA1a                         <---------TGA1a                         =======================bZIP_DOF                         <---------ANAC55(2)   <---------YAB1                        <-----------STF1      --------->AHL20(1)                        ------>NtERF2         <---------AHL20(1)                       <---------ALFIN1       <---------AHL20(2)                    --------->ANAC46         --------->YAB1                       <-----------GT1               <---------GLK1(2)     <----------DOF2   <----------DOF2        <----------DOF2            <-----------------AGL1   *TSS    --------->AHL20(2)          <-----------GT1  ----------->GT1 <-----------GT1<---------CCA1(2)   ---------->ID1  <---------YAB1              <---   aatatcgcaaaatttccgattttcgccacgtcaccttatcttttgaattatatttgtctttttgtttcattctaattacgctttaaacgggcctgatttt  15804200                         <---------KAN4(2)                      --------->ANAC58                      --------->ANAC58                     --------->LBD16              --------->ARR14(2)                        >>>>>>>>>MYB98         <---------YAB1              <---------ARR14(2)             <---------AHL20(1)              --------->AHL20(2)             <---------CCA1(2)               --------->AHL20(2)              <---------AHL20(2)           <---------ANAC58   ------>ZmHOX2a(2) <---------WOX13(1)         <---------WOX13(1)           <---------ANAC58--------->ATHB12  --------->AHL20(1)   <---------At5g28300 ------AHL20(2)      <---------TOE1(2)       <---------AHL20(2)  <-----------GT1   aaaatgggccatggcctatctcccacgaatgatcgaagaacatctaattaattgaagtaacatagttttactgtttgatttatatttggagaactacaca  15804300                                                                                                    <                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            <--------                        --------->AHL20(1)                                                 ----------                        <---------AHL20(1)                       <---------MYB52(1)        ----------                        --------->ARR11(3)          --------->ZAT6<---------MYB46(3)    <----------DOF2          --------->REM1(2)    ------->TEIL <---------ARR14(2)  <-------GAMYB     --------->HSFB2a(1)  <-----------GT1       <---------ARR11(3)  --------->ARR14(2) <---------MYB46(3) <---------HSFB2a(1)   aatttttctctgtgtatacaactcaatattttgaacgtcgagagaggtttctcaacactataagacggttgtttctgtataagaaggtttctttacgtac  15804400      ----------->RAV1(1)   --------->ANAC58   --------->ANAC46   --------->ANAC58                                                                 <-----------ARR10 ---------REM1(2)      --------->ANAC58                                             --------->ARR14(2) -ANAC55(2)            ----------->GT1                                             <---------GLK1(2) >ANAC55(2)            --------->ANAC58                                       ------>NtERF2 -ANAC58            <---------ATHB12     --------->ARR14(2)                  <---------RAP2.6(2) -ANAC58 ---------->DOF2  >>>>>>>>>>GT-3b<---------ARR14(2)                  --------->ETT(2) ----->AtSPL8  <-------TEIL         --------->MYB52(1)     --------->YAB1    ----------->HVH21 ----->AtSPL3 --------->CCA1(2)--------->AHL20(2)<----------DOF2             <---------ETT(2)--------   tctacaagcaacaaagatacaaatcaagaaaaataaaacaccggttccttcctttttaaaatcaaaacagagtagtttggcgaccgattcttctcggtaa  15804500                    --------->GLK1(1)                    <---------GLK1(1)                    <------ZmHOX2a(2)                   --------->ARR14(2)                   <---------AGP1                    ------>MYB83                             <------                   <-----------ARR10                 ------>MYB46(1)              --------->LBD16                   <---------ARR14(2)              <---------ALFIN1              <---------ANAC58                  <---------CCA1(2)                --------->AtMYB61<---------ANAC46--------->SPL7                  <---------ARR14(1)            --------->YAB1     <---------MYB46(3)         -------                ------>ZmHOX2a(2)              --------->MYB46(3) --------->WRKY38(1)       ---------               <------ZmHOX2a(2)         <------NtERF2           <---------MYB52(1)------>NtERF2              <---------ARR14(2)        <---------RAP2.6(3) --------->ANAC58     <---------ANAC58        --------->YAB1                  <-----------HVH21   --------->ANAC46    --------->At4g35610       <---------YAB1------>ZmHOX2a(2) --------->RAP2.6(2)  --------->ANAC58    <---------At4g35610<- ->At5g28300  --------->ARR14(2)       --------->ANAC46   <---------ALFIN1      <---------LBD16<-----   accaaagttttgataagatcggatctcaccatgaactgtagccgtcacaatcaccatcccccaagccgttggctgtatagtttgcggaccatgccctcca  15804600  Previous    Next  AGI:  At2g37660.1    Description:  binding / catalytic/ coenzyme binding. Identical to Uncharacterized protein At2g37660, chloroplast precursor [Arabidopsis Thaliana] (GB:O80934;GB:Q94B61); similar to binding / catalytic/ coenzyme binding [Arabidopsis thaliana] (TAIR:AT5G02240.1); similar to Os05g0110300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054439.1); similar to hypothetical protein OsI_017494 [Oryza sativa (indica cultivar-group)] (GB:EAY96261.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 15802291    to: 15804137    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g37670.1    Description:  WD-40 repeat family protein. similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G02430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15640.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65559.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 15804462    to: 15807614    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version