Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->ANAC58     --------->ANAC58    --------->SPL7  <---------SPL7 ---------------AtSPL3 --------ANAC46 --------->OsCBT --PIF5 --MYC4 ->MYC3 ->MYC2 --MYC3 --MYC2 ->MYC4 ->PIF5 -->O2                           ------------>AtMYB77 -->TGA1a                   ---------->DOF2 ---TGA1a                 <---------ZAT2 -->ANAC55(2)             --------->ZAT2         <-----------GT1                  <----------DOF2 -->ANAC46               --------->ANAC46    <---------GLK1(2)              <----------DOF2 ---O2              --------->ARR14(2)    --------->HSFB2a(2)            ------->TEIL <----------DOF2 -ALFIN1            <---------ARR14(2)  -------->P    <----------DOF2   <---------CCA1(2)  <---------   gtctggtacggtagagtagccaaatcccagcaaagtcacagttaccagaatttactctttcattctgaattgttgtatctttttctttcttttcttttga  15765300                                           ---------->DOF2                                           <--------ATHB1                                           <---------ICU4                                           --------->YAB1                                          <---------ATHB51                                          --------->ICU4                                  <---------HSFB2a(2)                                  --------->HSFB2a(2)                              <----------DOF2                                              <---------ZAT18                           <---------ARR11(3)                                  <---------AHL20(2)   --------->ARR14(2)      --------->ARR11(3)   <---------YAB1              --------->AHL20(1)   <---------ARR14(2)   >>>>>>>>>WRKY6  --------->YAB1            --------->ZAT6 <---------AHL20(2) -DOF2                --------->WRKY38(1) <---------ATHB12 <----------DOF2  <---------AHL20(1)     --   actcaaatccttgttatctccctgttgactatctttttagaacaataatgctcattagaagcttttcaactctagttatatattattttccaatgcacaa  15765400                                                                     --------->TOE2(3)                                                                  <---------GLK1(1)                                                                  --------->GLK1(1)                                                           <---------At4g35610       <-----------GT1                                                           --------->At4g35610     <---------ATHB12                                                           --------->ZAT2      --------->LBD16            <-------TEIL                                   <---------ZAT2<---------At4g35610  <-----------GT1            --------->YAB1           --------->MYB46(3) --------->At4g35610       -- ------->YAB1      --------->AtLEC2      --------->AtLEC2--------->MYB46(3)------->GAMYB    ---------   attataacatttgattcattcattcaaacaattagaacatttcatacaaatccctaacaacagctgagaaatctcaactcccccaattaacaaatctcaa  15765500                                                                                   <---------ARR11(1)                                                                                --------->ANAC55(2)                                                                          <-----------HVH21          ----------->HVH21                                           <-----------RAV1(1)          <------NtERF2<-----------HVH21                             ------>ZmHOX2a(2)         <---------RAP2.6(3)                                       <---------AGP1 <---------CCA1(2)        --------->ANAC46----------->HVH21                          --------->ARR14(2)           -----        --------->RAP2.6(2)                                        <---------ARR14(2)--------->YAB1 ------->ANAC46   <----------DOF2                              <---------MYB52(1)--------->LBD16<---- >TOE2(3)<-----------HVH21       --------->O2                 <-------GAMYB     <---------ANAC55(2)--   taggccatagccgtcacagtctttctgtcacagccatgtgattttgtgaacatcacatatagaccgttggatctgttgtcatccgtatcatcacatcgga  15765600                                                                          <------------CBF                                                                     <<<<<<<<<<E2Fc                                                                     <<<<<<<<<<E2Fa             --------->ATHB12                                        <<<<<<<<<<E2Fb            <---------YAB1                                           <<<<<<<<<<E2Fd        <---------AHL20(2)                                           <<<<<<<<<<E2Fe       <---------ICU4            --------->DAG2                      <<<<<<<<<<E2Ff   <---------AHL20(2)           ---------->DOF2                     --------->LBD16   --------->AHL20(2)     --------->DEAR3(1)    ---------->DOF2     ----------->GT1            <----- ---->ARR14(2)        --------->DEAR3(2)    <---------LBD16       <---------LBD16              ------ -----ARR14(2)>>>>>>>>>ARR2  <---------ANAC46--------->LBD16      --------->LBD16             <------ --------->GT1>>>>>>>>>ARR1------>NtERF2   <---------LBD16      <---------LBD16        ------->TEIL<-   accgtttaatttttatgattgtgaaacgacgacgtaaagttgttaaccgggaaagacgaagaaaaacgcgcgggaaaattgagagactgcatcttaatca  15765700      --------->GLK1(2)     <---------GLK1(2)            <---------YAB1     --------->ARR14(2)  <---------YAB1     <---------ARR14(2)<---------At4g35610                      <---------AHL20(2)             <----- <---------TOE1(2)     *TSS  <-------TEIL                      --------->AHL20(2)           <-------TEIL ----ICU4             --------->GLK1(2)                 <---------At4g35610           <---------ARR14(2) --->YAB1            <---------GLK1(2)                  --------->At4g35610      --------->ALFIN1 ---ATHB12 --------------->AGL15 <---------TOE1(2)      --------->ZAT2           <---------ANAC46 <-- --------SPL7  <---------AHL20(2)<---------TOE2(2)      <---------ZAT2<---------TOE2(3) ------>ZmHOX2a(2)   tcgtagggattctctattttttggaatctgattcatatgtttggggtttaatagtctcagctcaaataaatctaggttaaactgtgtggatcgattcata  15765800                                                                                               <-----                                                                                            ---------                                                                                            <------NtERF2                                                                                           <---------ATERF1(1)                                                                                          <---------DEAR3(1)                                      <---------ICU4                                     <------NtERF2                     --------->MYB52(1)  <-----------GT1                               <---------ANAC46                   <---------MYB59 <---------ICU4                                      <---------bZIP60(1)     <-----------HVH21            --------->ICU4       <----------DOF2                 --------->bZIP60(1)     --------->LBD16 ------>MYB83 <---------YAB1    <---------ALFIN1                  <------NtERF2    --------->ANAC46 ------>MYB46(1)  --------->AHL20(2)  --------->ATHB12          --------->ALFIN1 ----CCA1(2) --------->AtMYB61  --------->YAB1 <---------YAB1                  <-----------GT1------>NtERF2 -------GLK1(2)    --------->AtMYB61  <---------AHL20(2) <---------YAB1        --------->MYB52(1) ---   tattctccgtcaaaaccaaaaccaaaccgatttgtcataattttttcttatcatccactttcattggctagagggacattgtaacggtgtcgtcgtcgcc  15765900                                                               <---------GLK1(2)                                                              --------->At4g35610                                                        <-----------ARR10                                                     <---------ANAC58        <------ZmHOX2a(2)                                                     <---------ANAC46       <---------ARR11(3)                            <----------DOF2          --------->ANAC55(2)    --------->ARR11(3)   <--- -NtERF2              <---------KAN4(2)              <---------ANAC58   <-----------GT1          <--- >ATERF1(1)    ------>ZmHOX2a(1)                 <----------DOF2      <----------DOF2            <--- ------>MYB52(1)---------->DOF2             <---------ZAT18   <---------At4g35610  <---------AHL20(2)   aaacgatttgcctcttcctaaaggtatgttctttcatttctctcagtgcccctttgcgtatttcagcttcttctttacgatctaattcatttctatgttt  15766000                                                   <----------DOF2                                              ------>ZmHOX2a(2)                                             <------ZmHOX2a(2)                        <---------AtMYB61                                            --------->ARR11(3)                      <----------DOF2                                     <---------ARR14(2)                    <---------AHL20(2) ------ANAC58           ----------->GT1     --------->AGP1                --------->AHL20(1) ------ANAC58      --------------->AGL15    <---------ARR11(3)            --------->AHL20(2) ------ANAC46      <---------------AGL15 <---------HSFB2a(2)              <---------AHL20(1)   cgtttgattctttgttcaattctgaattgagaaaatggcgattcgagatctatcttttcggtttttcatgtaagaatataatctagctttggtgtttgta  15766100                                                     <---------MYB59         <---------ANAC58                                                    --------->ANAC55(2)      <------MYB83                                                  <-----------GT1            <------MYB46(1)                                                  <---------AHL20(2)         <---------ANAC58                                                  --------->AHL20(2)        --------->MYB59                                              --------->AHL20(2)     --------->YAB1                 ---------->DOF2              <---------AHL20(2)    <---------YAB1            <------         <---------ANAC46            <----------DOF2<---------ANAC55(2)<---------YAB1   <---------ANAC58     <---------ANAC58        <----------DOF2--------->TOE2(3)     --------->YAB1        <---------ANAC58     <---------ANAC58  <----------DOF2      <----------DOF2  ----------->RAV1(1)  <---------YAB1    <   ttggtttacttgtgggaagaaaagtctttctctttgggactttaaactttaattacttaactccaacatcatcatagttgggttctgtttgcgagattca  15766200  Previous    Next  AGI:  At2g37555.1    Description:  other RNA Range:  from: 15763800    to: 15765357    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g37560.1    Description:  ATORC2/ORC2 (ORIGIN RECOGNITION COMPLEX SECOND LARGEST SUBUNIT); DNA replication origin binding / protein binding. Identical to Origin recognition complex subunit 2 (ORC2) [Arabidopsis Thaliana] (GB:Q38899); similar to unnamed protein product [Vitis vinifera] (GB:CAO61324.1); contains InterPro domain Origin recognition complex subunit 2; (InterPro:IPR007220) Range:  from: 15765723    to: 15768340    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version