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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                --------->ANAC58
                --------->ANAC58
            <------ZmHOX2a(1)
   ================HOX2a_HOX2a
   ------>ZmHOX2a(2)
  <------ZmHOX2a(2)                                                       <-------GAMYB
  =================HOX2a_HOX2a                  --------->ANAC58          <---------ANAC46
 --------->ARR14(2)                             --------->ANAC46         <---------ANAC58
 <-----------ARR10                      <-------TEIL       --------->ANAC46                        -
 <---------ARR14(2)          --------->ANAC58   --------->ANAC58         <---------ANAC58         --
<------ZmHOX2a(1)            --------->ANAC58----------->HVH21          --------->ZAT18           --
>GT1      --------->LBD16  ---------->DOF2 <---------At4g35610          <-------TEIL           -----
 
agaggatccaatccaggacaagaacaacgagaaagcatcgaaatacatctcacgcgaagtataagcgatgagaagtgcgttgtaagagaaggcatttcta  15673900
                                      <------ZmHOX2a(2)
                                <---------ARR14(2)
                                --------->ARR14(2)
                               <------NtERF2
                              --------->LBD16
                         <----------DOF2
                        <---------ANAC58
                    <---------ANAC58 --------->ARR11(3)
      <---------ANAC46  <---------ANAC58 ------>ZmHOX2a(1)                               ===========
-------->At5g28300  <---------ANAC46 --------->ARR14(2)                     <------ZmHOX2a(1)
----->GAMYB         <---------ANAC58 <---------ARR14(2)            --------->WRKY12      <----------DOF2
--------->GT1   <-------MYC3 <---------ANAC46   <---------ZAT6     ----------->HVH21 <---------RAP2.6(2)
---->MYB52(1)   ------->MYC3<---------LBD16     ----------->GT1  <----------DOF2    <---------LBD16
 
acggtaatttcgtcgaacacatggagtgcttggcggaaacgatcctgcctagtgtaaaaactgatgagctttgacgcgaggaagttgtccggcttgatgg  15674000
                                                                                                  <-
                                                                                                ----
                                                                                                ----
                                                                                                ----
                                                                                                ----
                                                                                                ----
                                                                                               -----
                                                                                               -----
                                                                                               -----
                                                                                             -------
                                                                                             -------
                                                                                            --------
                                                                                          <---------SPL7
                                                                                         --------->WRKY38(1)
                                                                                         <---------ETT(2)
                                                                                         -----------
                                                                                         --------->DEAR3(1)
                                                                                        --------->ATERF1(1)
                                                                                        <------NtERF2
                                                                                      --------->RAP2.3(2)
                                                                                      --------->RAP2.3(3)
                                                                                      --------->DEAR3(1)
                                                                                     --------->RAP2.3(1)
                                                                                     --------->RRTF1(1)
                                                                                     --------->ERF1
                                                                                    ------>NtERF2---
                                                                                    --------->ABI4(1)
                                      <------ZmHOX2a(1)                            <---------ALFIN1-
                                --------->REM1(2)                                  --------->DREB2C(2)
                               --------->ALFIN1                                    --------->DEAR3(1)
                              <-------MYC4                                        --------->DEAR3(2)
                              ------->MYC4                                        --------->MYB46(3)
                              ------->PIF5                                        --------->DEAR4(2)
                              <-------MYC3                                       <---------ATERF1(1)
                              <-------PIF5       <---------bZIP60(2)             ------->TEIL-------
                              <-------PIF4       <---------TGA1a                --------->ANAC46----
                              ------->PIF4       <---------ANAC58               <---------ALFIN1----
                              ------->MYC3       <---------O2                  <---------ABI4(2)<---
                              ------->MYC2    ----------->TGA1                --------->ANAC58------
                             <---------TGA1a  ----------->HVH21               --------->ANAC46<-----
                             --------->O2    <-----------HVH21                --------->ANAC58<-----
                             <---------O2   <---------DEAR3(2)               --------->SPL7 --------
                    <---------At4g35610     <------MYB46(1)              <---------------AtSPL3-----
                    --------->At4g35610    <---------DREB2C(2)           --------------->AtSPL3-----
              <---------ANAC46<-------MYC2 <---------DEAR3(1)          ------------------>SPL14-----
           <---------LBD16   --------->TGA1a<------MYB83  --------->ALFIN1 <---------SPL7--------->WRKY12
       <---------ARR14(2)   ------------>OsbHLH66<---------ANAC46     ----------->HVH21<---------ATERF1(1)
       --------->ARR14(2)----------------->PIF3(1)    <---------ZAT14 --------->WRKY38(1)--------->ETT(2)
  <----------ID1----------->HVH21 <---------ANAC46<---------MYB46(3)--------->At4g35610------>NtERF2
=======================================bZIP_DOF  <---------ANAC58   <---------bZIP60(2)<-----------HVH21
 
agaagacgacaatacgcgcgtgaagctgaagcacgtggagaggaagtcggtgacgggtgaagtgctggatgaggtgaccgtacgcaccgccgtcgaccgc  15674100
-----NtERF2
----->RAP2.3(3)
----->RAP2.3(2)
----->RRTF1(2)
----->DREB2C(2)
----->RAP2.6(2)
---->ATERF1(1)
---->RRTF1(1)
---->RAP2.3(1)
-->DEAR3(1)
-->AtMYB61
->DEAR3(2)
>HVH21
--->NtERF2
-------------->AGL15
>GAMYB
----->RRTF1(3)
----->DEAR3(1)
------ALFIN1
--->At4g35610                                                                                   ----
----At4g35610            <-------GAMYB                                                          ----
----ATERF1(1)          <-------TEIL                   <-----------ARR10   ----------->GT1      <----
->MYB46(3)--------->ANAC58                           <---------CCA1(2)    --------->LBD16     ------
---->DEAR4(2)    <---------AtLEC2                  --------->YAB1       <---------LBD16    <--------
---->ERF1 --------->ANAC58           <---------ARR14(2)     --------->MYB46(3)       ------------>CBF
---->ORA47(2)  --------->AtLEC2      --------->ARR14(2)  *TSS  ---------->DOF2    --------->AHL20(2)
 
cgccttgtttagcaagccttgcaaggctcgttgaatttcgaatcccaacttcattcatatctaaccaaaagctaaaccggagaaataaaacaatatgaat  15674200
    ------------>CBF  <---------AHL20(2)
----->AHL20(1)       <---------YAB1
----->ARR11(3)------->GAMYB                                                           *TSS     <----
-------TBP --------->MYB52(1)               <-----------RAV1(1)                      <----------DOF2
->TEIL     <-----------GT1       ---------->DOF2            --------->MYB52(1)       <---------DAG2
-YAB1    --------->AHL20(2)   <----------DOF2          <-----------GT1            <-----------GT1
 
atatagaggcaatttaacgggcttattaatgggccttaaagcccatagtgtcgctgtattacagaacggagttttgaaatcgatttgacttttttagttt  15674300
                    <---------YAB1
               -------->ATHB1
               <---------ICU4
               --------->YAB1                                                                   ----
              --------->ICU4 <----------DOF2                                                    ----
              --------->AHL20(2)                                  <------ZmHOX2a(2)             <---
              <---------ATHB51                      ------>ZmHOX2a(2)                  --------->MYB52(1)
 <---------ANAC58 --------->ATHB51                <---------ARR11(3)                 <---------MYB52(2)
 <---------ANAC58<---------YAB1         <-----------GT1   --------->ZAT14  ----------->GT1  <-------
---TEIL       <---------AHL20(2)  <-------GAMYB   --------->ARR11(3)      <-----------------------TaNAC69(2)
 
catgtcttgtctgagaaattattattgtcgagctttcggttataaacagtctcgatcttgctacagtcgatcactgaatcgtgaaatagctaacgagtca  15674400
                                                    --------->GLK1(2)
                                                    <---------ARR14(2)
                                                    --------->ARR14(2)
                                                   <---------GLK1(1)
                                           <---------ARR11(1)
                                           --------->ARR11(3)
                                           <---------ARR11(3)
              <---------ZAT2               <---------ARR14(2)
              --------->ZAT2               --------->ARR14(2)           <-----------HVH21
------->RAV1(2)                           <---------CCA1(2)             <-----------TGA1   <--------
----->At4g35610                         --------->YAB1               --------->ARR14(2)    <--------
------At4g35610                      --------->GLK1(1)               <---------ARR14(2)    <--------
----HVH21--------->CCA1(2)           <---------GLK1(1) <-----------RAV1(1)   <------ZmHOX2a(1)    <-
 
tctgaagttgagagacgagctcgttctctgagagttttggatatcatatcttcgaaatctggtggagtttcgaatcgtcaggaccattttggtttcgttc  15674500
                                                  <---------ARR14(2)
                      <---------ANAC58            --------->ARR11(3)
                      <---------ANAC58            --------->ARR14(2)
                 <---------ANAC58                ================HOX2a_HOX2a
                 <---------ANAC58              <---------TOE1(2)                        <---------ZAT18
              <---------GLK1(2)               --------->LBD16                           --------->ZAT18
    <----------ID1   <------NtERF2            <---------LBD16        <---------------AGL15
-ANAC46       --------->ARR14(2)    --------->ANAC58                <-----------------AGL3  <-------
-ANAC58       <---------ARR14(2)    --------->ANAC58      ------>ZmHOX2a(2)            <---------ANAC58
-ANAC58  --------->MYB52(1)       <-----------RAV1(2)   --------->ARR11(3)             <---------ANAC58
-----ZmHOX2a(1) <-------TEIL    <-----------HVH21<------ZmHOX2a(1)  ----------------->AGL3  --------
 
aggaatttcgacaaacagattcgtggcgattcagaggtcaggcaatttccgaggattttgatctctcaagaaccaaaaatggagtttcaagcgtgctcga  15674600
                                                                                  ------>ZmHOX2a(2)
                                                                                 <------ZmHOX2a(2)
                                                                                <---------ARR14(2)
                                                                                --------->AGP1
                                                                                <---------ARR11(3)
                                                                                --------->ARR14(2)
                                                                                --------->ARR11(3)
                                                                                <---------ARR14(3)
                                                                              ----------->ARR10
                                                                           <-----------HVH21
                                                                           --------->LBD16
                                                                          <---------TGA1a
                                                                          =======================MYC_MYB
                                                                          ==========================
                                                                          <---------ANAC46
                                                                          <---------O2
                                                                          --------->O2
                                                                          --------->TGA1a
                                                                        ------>NtERF2
             --------->ARR14(2)                                         --------->LBD16
             <---------GLK1(2)                                         ------->GAMYB  <---------ANAC46
    <---------YAB1                                                    --------->MYB46(3)
    <-----------RAV1(1)                                              --------->At4g35610 <---------ANAC46
 <---------ARR14(2)            --------->ANAC58                   <---------YAB1--------->ARR14(3)
 --------->ARR14(2)        <-----------HVH21               <---------TOE1(3)<---------MYB52(1)
--HSFB2a(2)  <---------ARR14(2)--------->ANAC58        <---------ANAC58=============MYC_MYB
->HSFB2a(2) <------ZmHOX2a(1)---------->DOF2           <---------ANAC58--------->ANAC46  <-------GAMYB
 
agaagttatgctggaggattcttcaagctctgtcaagcgagatggatggagtttcgatgcttatggtttatcatccgccgtgagatcttgtgggttgaat  15674700
                                                        <---------At4g35610               <---------ZAT14
                                             <------MYB83                --------->ARR11(3)      <--
             --------->ARR14(2)              <------MYB46(1)         <------ZmHOX2a(1)    --------->ZAT14
             <---------ARR14(2)            --------->ALFIN1        <---------TOE2(3)<---------MYB52(1)
  <----------DOF2                       --------->DAG2  --------->At4g35610      ---------->ID1  ---
=============bZIP_DOF            <---------ANAC46     <-----------RAV1(2)<---------ARR11(3)     <---
 
cgagactttagaaccggttctgggtttcattgtttagcgttgaaaggtgggtttatctcagatgtctacttaggaagttctctggtcgttttgtacagag  15674800
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AGI:  At2g37310.1   
Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G29760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18068.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885)
Range:  from: 15671879    to: 15674158    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At2g37320.1   
Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G24000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18069.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885)
Range:  from: 15674287    to: 15675930    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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