Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->YAB1                                                                 --------            --------->MYB52(1)                                                             ----------            ------>MYB83                  --------->At4g35610                        --------->At4g35610          <---------MYB59                 <---------At4g35610                       --------->ANAC58        -------->P                 --------->YAB1                                   --------->ANAC58       --------->MYB52(1)          <---------ICU4                           --------->AHL20(2)     <---------MYB52(2)         --------->YAB1                              <---------AHL20(2)    ---     <---------MYB46(2)        --------->AHL20(2)                     ----------->GT1<---------At4g35610 ->MYB46(3) ------>MYB46(1)    <---------AHL20(2)    <---------MYB46(3) <---------YAB1  --------->MYB52(1)   cttcttaactaacctaacatattagttagacaattaataatgtcaactccaatatttgttgaaactccaatattgttataaattgcaagctaacaaagta  15651500                                                              --------->AHL20(1)                                   --------->ATHB12           <---------AHL20(1)                                   <---------ICU4             <---------AHL20(2)                                  <---------YAB1              --------->AHL20(2)                   --------->AHL20(1)                      --------->AHL20(2)                   --------->ARR11(3)                      --------->AHL20(1)                  <---------AHL20(2)                    --------->AHL20(2)               <---------ICU4    --------->ARR11(3)  --------->YAB1<-----------GT1       <------MYB46(1)         <---------ATHB12     <---------AHL20(2)       <------MYB83<---------AHL20(1)   <---------ANAC46--------->YAB1   --------->ATHB12<---------ARR11(3)  <---------MYB46(3)  <---------AHL20(2) --->GT1       <---------AHL20(2)<---------ARR11(3) --------->AHL20(2)           ---------->DOF2 >DOF2 ----------->GT1   --------->TOE2(3)   <---------ZAT6<---------AHL20(1) <---------ZAT6 ------>ICU4  --------->AHL20(2)--------->YAB1     --------->AHL20(2)       ----------->GT1        --   acaattgataggtttaataaatattttcgtcaaatgatcattgggtagtggtatttaataatattttattaactcatgtagtgaaaagtattggacaaga  15651600                                                                      ----------->GT1                                                                  <-------GAMYB                                                                  ===================================                                                                 <------MYB83                                                                 <---------ANAC46                                                                 <------MYB46(1)                                                                <------MYB46(1)                                                                <------MYB83             <------MYB46(1)                                                                <---------MYB46(3)       <------MYB83                                                              <--------P                --------->MYB111(1)                                                             <---------ANAC58           <------------                        --------->MYB52(1)                   <-------GAMYB              <------------                       ----------->HVH21     <-----------GT1 <---------ANAC58           --------->MYB59                   <---------CCA1(2)  ------->GAMYB         <---------MYB46(3) --------->AHL20(1)   -              ---------->ID1    <---------REM1(1)           <------MYB46(1)    <---------AHL20(2)   <              <---------CCA1(2) --------->ALFIN1            <------MYB83       --------->AHL20(2)<--- --------------------->TaNAC69(2)  <---------ARR14(2)      --------->MYB59--------->AHL20(2)     ----   tgactgaattttcttcgtctcttatctaacagaggtgtaaccgaaataaaccgaattcaatttggttgggttgagttaaaataaaataagttggtacagt  15651700       -------------->OsCBT      ------->MYC2      <-------MYC3                    <-------MYC2      ------->MYC3                    ------->MYC3      <-------MYC2                    <-------MYC3     <---------ANAC46                 ------->MYC2     --------->ANAC55(2)             <---------ANAC58     <---------ANAC55(2)             <---------ANAC58     --------->O2                  <---------ANAC58     <---------TGA1a               <---------ANAC58           <---------AtMYB61     --------->TGA1a              <---------ZAT18       <---------ARR11(3)                          <     <---------O2               ------->MYC3    --------->MYB46(3)                              -----  --------->ZAT14               ------->PIF5   --------->ANAC58                                <----- ==============MYC_MYB          ------->MYC2   --------->ANAC58                             --------- ---AtSPL3                      <-------PIF5  ------->GAMYB<----------DOF2                  --------- ---AtSPL8                      <-------MYC2 <---------MYB55(2)       --------->ZAT14       --------- -------->At4g35610             <-------MYC3 <---------MYB111(2)   --------->At4g35610    ------>MYB46(1) ---------At4g35610           ------------>OsbHLH66     --------->ARR11(3)<---------ZAT6  ------>MYB83 ------ZAT14                  <-------TEIL   --------->MYB46(3)   <---------DEAR3(1)      --------->MYB52(1) ----->ZAT14                 <------------OsbHLH66  <---------ATHB12  <---------ZAT14   --------->AtMYB61   tcagttcacgtgtttacttcgaacagaacaggctcgtgcgcgtgtcaacaaccaataagttcttttggtcgctgtagtcttcaactaaaaccaaacgaca  15651800                                                <---------WRKY12     <-----------RAV1(1)------->GAMYB   <---------MYB52(2)   <---------ANAC58    <---------MYB111(2)      <---------WRKY38(1)   <---------ANAC46    <------------MYB.PH3(2) <-------TEIL   <---------ANAC58    <---------MYB46(2)    --------->TOE1(3)                               <-------  --------->MYB52(2)   <---------MYB52(2)  <---------TOE2(3)                            <------------CBF ---------MYB52(1)     <---------MYB111(1)--------->MYB52(1)                           --------->ATHB12 ->NtERF2              --------->MYB46(3)------->GAMYB                          ---------->ID1 ----ALFIN1 ------>NtERF2               --------->MYB46(3)                      <-----------GT1 >ANAC46    <------NtERF2               <---------MYB55(2)                  <----------DOF2  <------- >ANAC58  <---------RAP2.6(2)           <---------MYB46(2)          <---------CCA1(2) <---------YAB1 >ANAC58  --------->ATERF1(1)          <---------At4g35610        ------>ZmHOX2a(1)<----------DOF2   ccgttccttgtggccgcgttttccaactaactttcaacttcaactaacgttcaacgagtgtccatctcctctatctctctttttccttttcattggcttc  15651900                                                            ------->TEIL                                                        ------->MYC3                                                        <-------MYC3                                                        <-------MYC2                                                        ------->MYC4                                                        <-------MYC4                                                        ------->MYC2                                                       <---------O2         <------NtERF2                                                       <---------TGA1a      --------->At4g35610                                                       ===================================bZIP_DOF                                                       --------->O2       <---------DEAR3(1)                                                       <---------ANAC55(2)<---------ANAC46                                              <---------ZAT14  --------->WOX13(1)                                              --------->ZAT14  --------->ANAC46        --------->ANAC58                                           <---------ANAC46 <---------ARR14(2)         --------->ANAC46                                      <---------HSFB2a(1)   --------->ARR14(2) ---------->DOF2                                      --------->HSFB2a(1)  <---------CCA1(2)<---------At4g35610      <---------ZAT14             --------->MYB46(3)   --------->ANAC55(2)<---------RAP2.6(2)      --------->ZAT14             <---------MYB55(2)   <--------ABF1      --------->ETT(1)    <---------YAB1               --------->AtLEC2      <---------ANAC46  --------->RAP2.6(3) --ANAC58           ----------->HVH21<---------TOE1(2) --------->TGA1a  <-----------HVH21 --ANAC58          *TSS       ------>ZmHOX2a(2)   ----------->HVH21    --------->ALFIN1--------->ANAC58   ttcatcactatagagactaaaactgaccttgatccatccaacgttccctatactgacacgtgtatccatcacagtgtcggctaaagctcaaggaactcat  15652000                                                               --------->ARR11(3)                                                               <---------GLK1(2)                                                               <---------ARR11(3)                                             <------ZmHOX2a(2) --------->ARR14(2)                                      <---------ARR14(2)<-------TEIL                                      --------->ARR14(2)------>ZmHOX2a(2)                                  <---------LBD16      =====================================HOX2a_HOX2a                --------->At4g35610 --------->LBD16   <---------ARR14(2)                          ---              <---------ICU4     --------->MYB52(1)   --------->ARR14(2)                         <---           --------->YAB1   --------->YAB1--------->LBD16      <---------ARR14(2)       ---------->DOF2       <-------TEIL      <---------ICU4 ------>ZmHOX2a(2)--------->WOX13(1)          ------>ZmHOX2a(1) --------->ANAC58        --------->YAB1<------ZmHOX2a(2)====================================HOX2a_HOX2a --------->ANAC58       <---------ATHB12<---------LBD16<------ZmHOX2a(2)     <---------MYB59   ------   accaagaaatacatcatcatctctcaataatcacaaaccggatccggatcaatttggatccatcagattttcttcgttccctaactcctaaaaaggagag  15652100                                                    --------------->AGL15                                                    <---------------AGL15                                                   <-----------------AGL2                                                   ==================================================                                                   <-----------------AGL3                                                   <-----------------AGL1                                                   <-----------------AG                                                --------->ZAT18                                                <---------ZAT14                                         --------->TGA1a         --------->ATHB12          ------>ZmHOX2a(1)              <---------ANAC46        -------->HAHB4         --------->TOE2(3)               <---------TGA1a         <--------ATHB1         --------->TOE1(3)               =========================bZIP_DOF      --------->ARR14(2)                 <---------O2           <---------ATHB12                    <      <---------ARR14(2)                 --------->O2  <----------DOF2                         <----- ------>GLK1(2)                        <-----------HVH21        <---------YAB1                 ====== ------GLK1(2)--------->YAB1          --------->DEAR3(1)        --------->ICU4          <----------DOF2 ----->ARR10  <-----------GT1       <---------At5g28300<---------DAG2<-----------GT1<----------DOF2 <   attcttcaaatccttatcacaacttcagtttttgcattcaccgtcgtgagtgttctacttttggtaatgattcactagtcaagtttctttctttatgcta  15652200             ------>ZmHOX2a(2)            <------ZmHOX2a(2)                                                 ------>ZmHOX2a(1)           --------->ARR11(3)                                                --------------->AGL15           <---------ARR11(3)                                                <---------------AGL15           <---------ARR14(3)                                                <---------MYB59           --------->ARR14(3)                                               ----------------->AG           <---------ARR14(2)                                               <-----------------AGL1           <---------AGP1                                                   ----------------->AGL1           --------->AGP1                                                   <-----------------AGL3           --------->ARR14(2)                                               <-----------------AG          <---------CCA1(2)                                                 ----------------->AGL2 ==========MADS_MADS                        --------->YAB1                  ----------------->AGL3 ---------ANAC58               <---------TOE2(3)   <----------DOF2          <-----------------AGL2 ----------AGL15     --------->MYB52(1)    <---------ATHB12             <----------DOF2          <--- ============================================================================================MADS_MADS ---------ANAC58    --------->ICU4       --------->WOX13(1)         <----------DOF2 ----------->GT1   taacttgcaactagatcttgtactaatggaattgatgtttctccaatcatcttctttgattttgctccatctttcttttcctaatttggaaaaatgagtc  15652300                                                --------->ANAC58                                                --------->ANAC58                                                <---------ANAC55(2)                                          <---------TOE2(3)                                          <---------TOE1(3)                                     --------->ATHB12                                    <---------AHL20(2)                                   <---------WOX13(1)                                 --------->ATHB12         --------->GLK1(2)       --------->ATHB51         --------->ARR14(2)     <---------YAB1  --------->ANAC55(2)         <---------ARR14(2)   --------->ANAC55(2)                         --------->DAG2        <---------GLK1(2)     <---------ANAC55(2)  --------->MYB52(1)  ---------->DOF2        ------- -------DOF2<---------YAB1    --------->YAB1 --------->WRKY18(1)--------->YAB1----------->GT1 -------   tttacctatagaatctgataaatatgtctcttacataattgattaaggtcaagtaatggaggtgaatgatggtgaaagagtggtaatagcaaaaccagtt  15652400  Previous    Next  AGI:  At2g37260.1    Description:  TTG2 (TRANSPARENT TESTA GLABRA 2); transcription factor. Identical to WRKY transcription factor 44 (WRKY44) [Arabidopsis Thaliana] (GB:Q9ZUU0); similar to WRKY3 (WRKY DNA-binding protein 3), transcription factor [Arabidopsis thaliana] (TAIR:AT2G03340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18058.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 15651919    to: 15654144    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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