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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ARR11(3)
<---------
ARR11(3)
--------->
YAB1
-
------>
HSFC1(2)
--------->
YAB1
<-------
TEIL
---
-------
HSFC1(2)
----------->
GT1
----------->
GT1
------->
TEIL
--------->
DAG2
<---
--
HSFB2a(2)
<---------
TOE2(3)
<-----------
HVH21
---------->
DOF2
---------->
DOF2
--------
agtatcga
ctaaaacatatcaaggtaaaacaaacaaatgggtcatatagagtaattcaaagataatgtatttgctaaaaaaaagtttcataaaccaaaag
15518200
--------->
WRKY18(1)
<-----------
HVH21
--------->
ARR14(2)
<---------
GLK1(1)
--------->
GLK1(1)
--------->
ANAC58
-
<---------
ATHB12
--------->
ANAC58
--------->
RAP2.6(3)
--------->
TOE2(3)
--------->
GLK1(2)
--------->
ANAC46
--------->
MYB52(1)
---------->
GT1
<---------
GLK1(2)
--------->
AtLEC2
----------->
HVH21
------>
GLK1(2)
--------->
YAB1
--------->
At4g35610
--------->
LBD16
<-----------
HVH21
------
GLK1(2)
--------->
ICU4
<---------
ZAT6
--------->
WRKY38(1)
------>
ZmHOX2a(1)
<--------
-->
DOF2
<---------
YAB1
--------->
ANAC46
----------->
HVH21
<---------
ARR14(2)
<------------
MYB.PH3(1)
aatcgtcaatagagtaatcatagaatctctcttac
tcgcagtgtaagcagtagaattgacccattccaggcaaatcctcgtcaagctgtaacggcttaat
15518300
<---------
ANAC55(2)
--------->
ANAC58
--------->
ANAC46
--------->
ANAC55(1)
--------->
ANAC58
--------->
ANAC55(2)
<---------
MYB52(1)
<---------
LBD16
--------->
bZIP60(2)
--------->
At4g35610
<-----------------
AGL1
--------->
ANAC58
<---------
At4g35610
<---------
ARR14(2)
--------->
ANAC58
--------->
ZAT2
--------->
ARR14(2)
--------->
ANAC46
<---------
ZAT2
<-----------
HVH21
<---------
ANAC46
<---------
At5g28300
<-
---------------------->
TaNAC69(2)
--------->
WRKY12
<---------
LBD16
------>
ZmHOX2a(1)
--
DOF2
--------->
LBD16
--------->
REM1(2)
<----------
DOF2
<-----------
HVH21
<---------
ANAC46
<-
ctccgtctccggtttacgcaactctgtgtaaaccaagtcatcgcctttgacttcgaatttgtcacggcgagctgttttgtgagataatctcctcttcttc
15518400
===================
HOX2a_HOX2a
------>
ZmHOX2a(1)
<-----
<---------
At4g35610
------
<-----------
GT1
--------->
TOE2(3)
--------->
GLK1(2)
--------->
GLK1(1)
--------->
TOE2(3)
--------->
YAB1
<-----------
ARR10
---------
DOF2
--------------->
AGL15
<------
ZmHOX2a(2)
<---------
GLK1(2)
--------
DAG2
-------->
P
--------->
At4g35610
<---------
ATHB12
<---------
WOX13(1)
------
acttttctagtcggacatctacccat
tttagcttcctaagta
ctgagatcgaatcatcaattgaaaaattagtgactaattgataagaatctaaacgaat
15518500
<---------
At4g35610
--------->
At4g35610
<---------
GLK1(1)
<---------
YAB1
--------->
ZAT2
--------->
GLK1(1)
<-----------
GT1
<------
ZmHOX2a(1)
--------->
ARR14(2)
--------->
AHL20(2)
<------
ZmHOX2a(1)
<---------
ARR14(2)
<
----
ARR14(2)
--------->
MYB52(1)
--------->
REM1(2)
--------->
LBD16
--------->
RVE1(1)
->
TEIL
--------->
TOE1(2)
--------->
ALFIN1
<---------
LBD16
--------->
AHL20(2)
--->
ARR14(2)
--------->
TOE2(2)
--------->
GLK1(2)
<----------
ID1
<------
ZmHOX2a(1)
*
TSS
<--
ttgcagattaattcaaaacttac
gattcagagaagaaactgtgtaggaggagctgaagacgacgaatgcggaagaggaaaccctagaaaaaat
atcagtt
15518600
<
-
<---------
DEAR3(2)
----
<---------
MYB46(3)
<---
--------->
DAG2
<---
---------->
DOF2
----
--------->
TOE1(3)
----
--------->
TOE2(3)
<---
----------------->
AG
-----
<-----------
GT1
<-------
GAMYB
--------->
ANAC58
<----
--------->
ICU4
<---------
RAP2.6(2)
--------->
ANAC46
-----
<------------
CBF
------------>
AtMYB77
--------->
ANAC58
<----
---------->
DOF2
<---------
MYB59
----------->
HVH21
--------->
ANAC58
----------->
ARR10
<-
-------
GAMYB
--------->
ATHB12
<---------
DEAR3(1)
<----------
DOF2
--------->
AHL20(2)
-------
-------
ANAC46
<---------
WOX13(1)
<---------
ARR14(2)
--------->
ANAC58
--------->
AHL20(2)
--------
tcggttataaagtattgattaacctaaaaagggcggtttcagtgatggagactttgacgcaaggcccatttattaaacaggcttagataggcccattaat
15518700
--------->
ATHB12
<---------
ICU4
--------->
ICU4
--------->
CCA1(2)
<---------
YAB1
<------
ZmHOX2a(2)
<---------
ATHB12
<---------
ARR11(3)
<---------
TOE2(3)
<-----------
ARR10
---------
AHL20(2)
--------->
AGP1
-------->
AHL20(2)
--------->
ARR11(3)
----->
YAB1
<---------
AGP1
-----
ATHB1
<---------
ARR14(2)
------
ICU4
--------->
YAB1
----->
ATHB51
--------->
ANAC46
---->
HAHB4
--------->
ANAC58
-----
HAHB4
--------->
ANAC55(1)
---->
ICU4
--------->
ANAC58
------>
ZmHOX2a(2)
--------
-----
ATHB51
<---------
ANAC55(2)
<-------
---->
AHL20(2)
--------->
ANAC55(2)
>>>>>>>
ZML2
-----
YAB1
<---------
LBD16
--------->
ARR14(2)
--------->
GLK1(1)
--------
YAB1
----------->
GT1
<---------
ATHB12
<-----------
HVH21
-->
YAB1
--------->
GLK1(1)
--------->
WOX13(1)
<---------
ATHB51
--------->
ANAC58
->
AHL20(2)
<---------
GLK1(1)
<---------
ARR14(2)
--------->
ICU4
--------->
ANAC58
aattaatgatttggaaatcagtaatacatacggaaccaattaagatctagtctgaaattattctgaaatagcattgtaagataagtcacagagttctagc
15518800
<---------
YAB1
<---------
AHL20(2)
<------
MYB46(1)
--------->
AHL20(1)
<------
MYB83
<---------
AHL20(2)
<---------
TOE2(2)
--------->
AHL20(2)
<---------
TOE1(2)
<---------
AHL20(1)
<---------
AtMYB61
<---------
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
-
<---------
MYB59
<---------
ANAC58
--------->
AHL20(2)
<
------->
TEIL
<---------
ANAC46
--------->
YAB1
<---------
TOE1(3)
--------->
ANAC46
->
HSFB2a(2)
<---------
ZAT6
--------->
YAB1
<---------
TOE2(3)
--------->
ANAC58
--
HSFB2a(2)
----------->
HVH21
<---------
ZAT6
--------->
TOE2(3)
<---------
MYB52(1)
--------->
ANAC58
aatgtacttggaccgaattagtgacagaagcgtaggtttactgataaatctcataaccttgttt
ttagggttccattaatttattagtataacaagaaac
15518900
<-------
GAMYB
<---------
ANAC58
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(l2)
<----------
DOF2
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<xxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
---------->
DOF2
<xxxxxxxxxxxxxxxx
smallRNA(i)
xxxxxxxxxxxxxxxx>
smallRNA(i)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
--------->
ALFIN1
<xxxxxxxxxxxxxxxx
smallRNA(i)
<-----------
RAV1(1)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<---------
ANAC58
<--------
ATHB1
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
<---------
ANAC58
--------->
YAB1
<---------
AHL20(2)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<---------
ICU4
<---------
AHL20(1)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
<---------
YAB1
--------->
AHL20(1)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
<---------
ATHB12
<--------
--------->
AHL20(2)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
--------->
ICU4
<---------
ANAC58
-------->
AHL20(2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
<---------
ALFIN1
<---------
ANAC58
---------
ATHB12
<xxxxxxxxxxxxxxxx
smallRNA(i)
<---------
ANAC58
--------->
ANAC46
---------->
ID1
caataaattcttagaagtggagagagcaagggaatgaaaggcctctttgcgttgcat
actcttaatgctccccacaatgatggttttgttgtcttgggga
15519000
--------->
ZAT14
--------->
AtMYB61
<---------
ALFIN1
<---------
ALFIN1
--------->
ANAC46
--------->
ANAC55(2)
<---------
ANAC55(2)
<<<<<<<<<<
HY5
--------->
ANAC46
--------->
ANAC46
<---
--------->
ANAC58
------
--------->
ANAC58
<---------
ALFIN1
<-----
--------->
ANAC55(1)
<----------
DOF2
<---------
AHL20(2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
<------
<---------
AHL20(2)
--------->
TGA2(2)
<---------
ANAC58
--------->
AHL20(2)
<-----------
TGA1
--------->
LBD16
-----------
<---------
ANAC58
<---------
AHL20(1)
<-----------
HVH21
*
TSS
--------->
LBD16
-----------
-
LBD16
<---------
ANAC58
--------->
YAB1
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<---------
ANAC58
gggtttgaagcttgtttcttctctctataattttttttgtcaccaatacgtcatgtctccaccaca
cttactatcccgagtttgaaatgctttccaatta
15519100
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AGI:
At2g36930.1
Description:
zinc finger (C2H2 type) family protein. similar to unknown [Picea sitchensis] (GB:ABK23952.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain Zinc finger, U1-type; (InterPro:IPR003604)
Range:
from: 15516977
to: 15518593
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At2g36940.1
Description:
unknown protein
Range:
from: 15518865
to: 15519066
Orientation: Reverse
Links:
TAIR
MIPS
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when using AthaMap.
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