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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
WRKY12
--------->
WRKY38(1)
<---------
At5g28300
<-----------
GT1
--------->
SPL7
--------->
ANAC58
<-----------
RAV1(1)
---------->
DOF2
<---------
ICU4
--------->
ALFIN1
----------->
GT1
--------->
ANAC55(2)
--------->
LBD16
<<<<<<<<<
SPL7
<---------
ANAC55(2)
--------->
ICU4
<---------
LBD16
<<<<<<<<<
SPL4
<-----------
RAV1(2)
--------->
ANAC58
<---------
At5g28300
<---------
SPL7
--------->
ATHB12
--------->
YAB1
<---------
At4g35610
<---------
MYB52(1)
<---------------
AtSPL3
--
<-------
TEIL
--------->
At4g35610
--------->
DOF5.7(2)
<------------------
SPL14
<-
cacattcatcaggtaaaagcttaagctcaagtaattcttac
cgtttaccccgtgttgctcttgttgtacggtccaagaacaccattggctcttcttcatc
15416500
------
---------
<---------
GLK1(1)
<---------
ANAC58
--------->
ARR14(2)
<---------
ANAC58
<---------
AHL20(2)
<-----------
GT1
<---------
ARR14(2)
--------->
YAB1
--------->
ZAT18
--------->
ANAC58
<---------
MYB52(2)
------->
GLK1(1)
<---------
HSFB2a(2)
--------->
ANAC58
--------->
ANAC58
--------
GLK1(1)
--------->
HSFB2a(2)
--------->
ANAC46
--------->
ANAC46
--------->
ANAC58
gatttccat
tgataacttgctcaactcttactt
ctacaagttcacaaatttaaacgaaaatgtcataacacacaaattaacaaatcagcaaggaaccccc
15416600
--------->
ANAC58
<---------
GLK1(1)
--------->
ZAT14
<---------
TOE2(3)
--------->
AHL20(2)
<---------
ZAT14
<---------
TOE1(3)
<----------
DOF2
--------->
ZAT18
--->
LBD16
--------->
ANAC58
--------->
YAB1
<---------
ANAC46
>
MYB46(3)
--------->
ANAC46
<---------
YAB1
<------
ZmHOX2a(1)
<---------------
AtSPL8
aaattagggtttctcgcaatttcaagactttacgattatatcgagagggaaacaggaacaaaaacccaaaatttgagtgatgtacacagtaatcgaagaa
15416700
<---------
HSFC1(2)
<---------
HSFB2a(1)
--------->
HSFC1(2)
--------->
HSFB2a(1)
<---------
HSFB2a(2)
<------
MYB83
<------
MYB46(1)
<-----------
GT1
====================
<---------
HSFB2a(2)
--------->
MYB59
--------->
DAG2
<---------
ARR11(3)
<---------
TOE2(3)
---------->
DOF2
--------->
ARR11(3)
<---------
LBD16
<--------
P
---------->
DOF2
----------->
GT1
--------->
At4g35610
<------
ZmHOX2a(1)
<---------
TOE1(3)
gagcccatgaaagcgagaatgaaaagtaatttgtgtgatgagcttaaaatctcgctcgaggagttac
cttcggaaaattttaggttggagaagtttcttc
15416800
------->
TEIL
<---------
ALFIN1
--------->
ABI4(1)
<------
NtERF2
------>
NtERF2
--------->
DEAR3(1)
--------->
RAP2.6(2)
--------->
RAP2.3(1)
--------->
SPL7
--------->
ATERF1(1)
<---------
ATERF1(1)
--------->
ATERF1(1)
--------->
DREB2C(1)
------>
NtERF2
<---------
ATERF1(1)
<---------
SPL7
----------->
HVH21
<---------
ETT(2)
<------
NtERF2
--------->
RAP2.3(1)
--------->
ATERF1(1)
--------->
LBD16
<---------
RAP2.3(1)
<---------
ATERF1(1)
------>
NtERF2
--------->
ATERF1(2)
<---------
ATERF1(2)
<---------
ANAC58
--------->
DEAR3(1)
--------------->
AtSPL8
<---------
DEAR3(1)
<-------
TEIL
<---------
LBD16
--------------->
AtSPL3
--------->
ATERF1(1)
<----------
DOF2
<---------
MYB52(1)
======================================
bZIP_DOF
<---------
At4g35610
======================================
bZIP_DOF
<---------
RAP2.6(2)
--------->
O2
--------->
DEAR3(1)
--------->
RAP2.3(1)
--------->
ANAC58
--------->
DEAR3(1)
<------
NtERF2
========================
MYC_MYB
--------->
ATERF1(1)
--------->
ANAC46
------->
GAMYB
--------->
ABI4(2)
--------->
ANAC55(2)
--------->
RAP2.3(2)
------>
NtERF2
--------->
ANAC55(1)
--------->
RRTF1(2)
<---------
ATERF1(1)
<---------
O2
--------->
ETT(2)
--------->
ANAC46
--------->
SPL7
--------->
TGA1a
--------->
MYB46(3)
<---------
ALFIN1
<---------
ANAC58
<--
<---------
TGA1a
--------->
DEAR3(2)
<-----------
HVH21
<---------
MYB46(3)
<----
--------->
ANAC58
--------->
AtMYB61
<----------
DOF2
------>
NtERF2
------
<---------
ALFIN1
<---------
DREB2C(1)
<-----------
GT1
--------->
ALFIN1
--------->
ATHB12
<--
================
MYC_MYB
<---------
ATERF1(1)
<---------
DAG2
<---------
DEAR3(1)
<---------
YAB1
<-----
gacgagcacacgtcttcgccggcgaccgccgcacctctttgattcactctttcacacacggtgccgctggttcgtacaccattgttattggacttgagat
15416900
<----------
DOF2
--------->
GLK1(2)
--------->
ARR11(3)
<---------
GLK1(2)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ARR11(3)
--------->
HSFC1(2)
<---------
HSFC1(2)
--------->
At4g35610
--------->
HSFB2a(1)
<---------
At4g35610
<---------
YAB1
<---------
WOX13(1)
-------
AHL20(2)
<---------
AHL20(1)
<--------
ATHB1
-----
RVE1(1)
--------->
AHL20(1)
--------->
ATHB12
--->
ARR11(3)
--------->
AHL20(2)
--------->
YAB1
-------
YAB1
<---------
AHL20(2)
----------->
GT1
<---------
YAB1
----
ARR11(3)
*
TSS
---------->
DOF2
<---------
HSFB2a(1)
------------>
CBF
----------->
GT1
attaatgggccttc
cacttagacattttcaaagcccatattatattagaagattctttttgtaaaataaaacttacaatgatagaccgctggggaaaaac
15417000
--------->
AHL20(1)
--------->
YAB1
<---------
AHL20(1)
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
---
<---------
AHL20(2)
<---------
AHL20(2)
---------
<---------
YAB1
<---------
ANAC46
<---------
AHL20(2)
<---------
ANAC55(2)
<---------
AHL20(2)
--------->
ZAT6
--------->
AHL20(2)
<---------
ANAC46
<---------
YAB1
--------->
ARR11(3)
<<<<<<<<<<<<<<<<<
LFY
--------->
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
<-----------
GT1
<---------
AHL20(2)
<---------
TOE2(3)
----------
<---------
YAB1
<---------
ICU4
<----------
DOF2
--------->
AHL20(2)
<-----------
GT1
--------->
ANAC55(2)
gttttatttttatttttattaatgaccttgagtaatttctttttacactggcatatataaaattttaaattaaatttacgatgaaaaatcgtaacgtaaa
15417100
--------->
YAB1
<---------
YAB1
<---------
ARR11(3)
--------->
ARR11(3)
--------->
YAB1
<---------
ARR14(2)
--------->
ARR14(2)
<---------------
AGL15
--
------------>
MYB.PH3(1)
----------->
GT1
--
<---------
AHL20(2)
--------------->
AGL15
<-
--------->
CCA1(2)
<---------
HSFB2a(2)
<------
<---------
ARR11(3)
--------->
HSFB2a(2)
-------
<---------
TOE2(3)
<-----------------
AGL1
---------
<---------
ARR11(3)
<-----------------
AGL2
--------->
ANAC46
------>
YAB1
--------->
ARR11(3)
<-----------------
AG
--------->
ANAC58
>
TOE2(3)
---------->
DOF2
--------->
AHL20(2)
----------------->
AGL1
--------->
ANAC58
->
GT1
---------->
DOF2
--------->
ARR11(3)
----------------->
AGL2
<-----------
GT1
<-
taataccaaaaaagaaagatgttaagatatataaatcggttaacaaaattgtccagaaatggtaatatcatagatagatttcaattttcaagtcatgcat
15417200
--------->
ANAC58
--------->
ICU4
--------->
ANAC58
------->
bZIP60(1)
---------->
DOF2
--------->
ANAC46
------->
TGA2(1)
--------->
HSFB2a(2)
<---------
ALFIN1
--------
bZIP60(1)
<---------
HSFB2a(2)
<---------
ZAT14
---
AtLEC2
------>
ZmHOX2a(2)
--------->
ZAT14
-->
YAB1
<---------
YAB1
<-----------
GT1
-------
>
AtLEC2
--------->
CCA1(2)
--------->
ICU4
--------->
DAG2
--------->
DAG2
--------->
ZAT14
--------
TGA2(1)
--------->
ZAT6
--------->
YAB1
---------->
DOF2
---------->
DOF2
------>
ZmHOX2a(1)
gatgtcattttggatataacacgagttgtcaacttgtcatgatcgagaaagcaaaagtaaacaaacaaaaagtgtttctacactcctctaaactccaagg
15417300
<---------
PCF5
<------
ZmHOX2a(1)
<---------
ALFIN1
================
HOX2a_HOX2a
--------->
ZAT14
------>
ZmHOX2a(2)
----------->
GT1
---------->
DOF2
--------->
ANAC46
<------
ZmHOX2a(2)
--------->
HSFB2a(1)
----------->
GT1
--------->
ANAC58
=================
HOX2a_HOX2a
<---------
ZAT14
--------->
DAG2
--------->
ANAC58
<---------
ANAC58
<---------
HSFB2a(1)
---------->
DOF2
-->
ANAC46
<---------
ANAC58
<---------
ALFIN1
<-----------
GT1
----------->
GT1
--------->
ARR11(3)
agcaagcaatatcgaagttgcgatctcatgcaggaccactggagaaggtttctacactcttctaaagctacagaaaaaaaaaaagtatataagaaattgt
15417400
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AGI:
At2g36740.1
Description:
ATSWC2/SWC2; DNA binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO62234.1); contains InterPro domain YL1 nuclear; (InterPro:IPR008895); contains InterPro domain YL1 nuclear, C-terminal (InterPro:IPR013272)
Range:
from: 15413769
to: 15416914
Orientation: Reverse
Links:
TAIR
MIPS
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