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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                        --------->WRKY12
                                        --------->WRKY38(1)
                                   <---------At5g28300
                                  <-----------GT1              --------->SPL7
                         --------->ANAC58       <-----------RAV1(1)
           ---------->DOF2     <---------ICU4   --------->ALFIN1
       ----------->GT1   --------->ANAC55(2)   --------->LBD16<<<<<<<<<SPL7
       <---------ANAC55(2)    --------->ICU4 <---------LBD16  <<<<<<<<<SPL4
     <-----------RAV1(2) --------->ANAC58 <---------At5g28300<---------SPL7   --------->ATHB12
  --------->YAB1    <---------At4g35610<---------MYB52(1)  <---------------AtSPL3                 --
 <-------TEIL       --------->At4g35610--------->DOF5.7(2)<------------------SPL14                <-
 
cacattcatcaggtaaaagcttaagctcaagtaattcttaccgtttaccccgtgttgctcttgttgtacggtccaagaacaccattggctcttcttcatc  15416500
                                                                                              ------
                                                                                           ---------
                                                                                          <---------GLK1(1)
           <---------ANAC58                                                              --------->ARR14(2)
           <---------ANAC58                   <---------AHL20(2)          <-----------GT1<---------ARR14(2)
      --------->YAB1                 --------->ZAT18              --------->ANAC58     <---------MYB52(2)
------->GLK1(1)               <---------HSFB2a(2)                 --------->ANAC58    --------->ANAC58
--------GLK1(1)               --------->HSFB2a(2) --------->ANAC46--------->ANAC46    --------->ANAC58
 
gatttccattgataacttgctcaactcttacttctacaagttcacaaatttaaacgaaaatgtcataacacacaaattaacaaatcagcaaggaaccccc  15416600
          --------->ANAC58
     <---------GLK1(1)                                                         --------->ZAT14
  <---------TOE2(3)             --------->AHL20(2)                             <---------ZAT14
  <---------TOE1(3)     <----------DOF2                                        --------->ZAT18
--->LBD16 --------->ANAC58      --------->YAB1                              <---------ANAC46
>MYB46(3) --------->ANAC46  <---------YAB1         <------ZmHOX2a(1)       <---------------AtSPL8
 
aaattagggtttctcgcaatttcaagactttacgattatatcgagagggaaacaggaacaaaaacccaaaatttgagtgatgtacacagtaatcgaagaa  15416700
                                                                                        <---------HSFC1(2)
                                                                                        <---------HSFB2a(1)
                                                                                        --------->HSFC1(2)
                                                                                        --------->HSFB2a(1)
                                                                                   <---------HSFB2a(2)
                                                                                  <------MYB83
                                                                                  <------MYB46(1)
                                                            <-----------GT1     ====================
                                                     <---------HSFB2a(2)     --------->MYB59
                   --------->DAG2           <---------ARR11(3)               <---------TOE2(3)
                  ---------->DOF2           --------->ARR11(3)   <---------LBD16<--------P
     ---------->DOF2----------->GT1  --------->At4g35610<------ZmHOX2a(1)    <---------TOE1(3)
 
gagcccatgaaagcgagaatgaaaagtaatttgtgtgatgagcttaaaatctcgctcgaggagttaccttcggaaaattttaggttggagaagtttcttc  15416800
                            ------->TEIL
                           <---------ALFIN1
                          --------->ABI4(1)
                          <------NtERF2
                          ------>NtERF2
                         --------->DEAR3(1)
                         --------->RAP2.6(2)
                        --------->RAP2.3(1)
                     --------->SPL7
                     --------->ATERF1(1)
                    <---------ATERF1(1)
                    --------->ATERF1(1)
                    --------->DREB2C(1)
                   ------>NtERF2
                   <---------ATERF1(1)
                   <---------SPL7
                  ----------->HVH21
                  <---------ETT(2)
                 <------NtERF2
                 --------->RAP2.3(1)
                 --------->ATERF1(1)
                --------->LBD16
                <---------RAP2.3(1)
                <---------ATERF1(1)
                ------>NtERF2
               --------->ATERF1(2)
               <---------ATERF1(2)                                  <---------ANAC58
               --------->DEAR3(1)                                  --------------->AtSPL8
               <---------DEAR3(1)                                  <-------TEIL
              <---------LBD16                                      --------------->AtSPL3
              --------->ATERF1(1)<----------DOF2              <---------MYB52(1)
      ======================================bZIP_DOF         <---------At4g35610
      ======================================bZIP_DOF       <---------RAP2.6(2)
      --------->O2--------->DEAR3(1)                       --------->RAP2.3(1)
      --------->ANAC58--------->DEAR3(1)                   <------NtERF2
      ========================MYC_MYB                      --------->ATERF1(1)
      --------->ANAC46------->GAMYB                       --------->ABI4(2)
      --------->ANAC55(2)--------->RAP2.3(2)              ------>NtERF2
      --------->ANAC55(1)--------->RRTF1(2)               <---------ATERF1(1)
      <---------O2--------->ETT(2)                    --------->ANAC46 --------->SPL7
      --------->TGA1a--------->MYB46(3)             <---------ALFIN1<---------ANAC58             <--
      <---------TGA1a--------->DEAR3(2)       <-----------HVH21 <---------MYB46(3)             <----
      --------->ANAC58--------->AtMYB61      <----------DOF2 ------>NtERF2                    ------
    <---------ALFIN1<---------DREB2C(1) <-----------GT1  --------->ALFIN1        --------->ATHB12<--
================MYC_MYB<---------ATERF1(1) <---------DAG2<---------DEAR3(1)     <---------YAB1<-----
 
gacgagcacacgtcttcgccggcgaccgccgcacctctttgattcactctttcacacacggtgccgctggttcgtacaccattgttattggacttgagat  15416900
                                                   <----------DOF2
                                                --------->GLK1(2)
                                               --------->ARR11(3)
                                               <---------GLK1(2)
                                               <---------ARR14(2)
                                               --------->ARR14(2)
                                               <---------ARR11(3)
                                              --------->HSFC1(2)
                                              <---------HSFC1(2)                   --------->At4g35610
                                              --------->HSFB2a(1)                  <---------At4g35610
                                      <---------YAB1                         <---------WOX13(1)
-------AHL20(2)                      <---------AHL20(1)                    <--------ATHB1
-----RVE1(1)                         --------->AHL20(1)                    --------->ATHB12
--->ARR11(3)                         --------->AHL20(2)                    --------->YAB1
-------YAB1                          <---------AHL20(2)----------->GT1    <---------YAB1
----ARR11(3) *TSS        ---------->DOF2      <---------HSFB2a(1)     ------------>CBF  ----------->GT1
 
attaatgggccttccacttagacattttcaaagcccatattatattagaagattctttttgtaaaataaaacttacaatgatagaccgctggggaaaaac  15417000
                                                                   --------->AHL20(1)
                --------->YAB1                                     <---------AHL20(1)
              <---------YAB1                                       <---------AHL20(2)
           <---------AHL20(2)                                      --------->AHL20(2)
           <---------YAB1                                         --------->AHL20(2)             ---
          <---------AHL20(2)                                  <---------AHL20(2)           ---------
        <---------YAB1                         <---------ANAC46   <---------AHL20(2)      <---------ANAC55(2)
      <---------AHL20(2)                 --------->ZAT6       --------->AHL20(2)          <---------ANAC46
     <---------YAB1 --------->ARR11(3) <<<<<<<<<<<<<<<<<LFY  --------->AHL20(2)      --------->YAB1
    <---------AHL20(2)                 <-----------GT1 <---------AHL20(2)<---------TOE2(3)----------
  <---------YAB1<---------ICU4     <----------DOF2    --------->AHL20(2)<-----------GT1   --------->ANAC55(2)
 
gttttatttttatttttattaatgaccttgagtaatttctttttacactggcatatataaaattttaaattaaatttacgatgaaaaatcgtaacgtaaa  15417100
                                                                --------->YAB1
                                                               <---------YAB1
                                                              <---------ARR11(3)
                                                              --------->ARR11(3)
                                                        --------->YAB1
                                                    <---------ARR14(2)
                                                    --------->ARR14(2)
                                                 <---------------AGL15                            --
                              ------------>MYB.PH3(1)   ----------->GT1                           --
                           <---------AHL20(2)    --------------->AGL15                            <-
                       --------->CCA1(2)         <---------HSFB2a(2)                         <------
                      <---------ARR11(3)         --------->HSFB2a(2)                         -------
                    <---------TOE2(3)           <-----------------AGL1                     ---------
              <---------ARR11(3)                <-----------------AGL2                --------->ANAC46
------>YAB1   --------->ARR11(3)                <-----------------AG                  --------->ANAC58
>TOE2(3)  ---------->DOF2  --------->AHL20(2)   ----------------->AGL1                --------->ANAC58
->GT1 ---------->DOF2 --------->ARR11(3)        ----------------->AGL2            <-----------GT1 <-
 
taataccaaaaaagaaagatgttaagatatataaatcggttaacaaaattgtccagaaatggtaatatcatagatagatttcaattttcaagtcatgcat  15417200
                                             --------->ANAC58
   --------->ICU4                            --------->ANAC58
------->bZIP60(1)                          ---------->DOF2                    --------->ANAC46
------->TGA2(1)                         --------->HSFB2a(2)                 <---------ALFIN1
--------bZIP60(1)                       <---------HSFB2a(2)                <---------ZAT14
---AtLEC2                              ------>ZmHOX2a(2)                   --------->ZAT14
-->YAB1                            <---------YAB1                         <-----------GT1    -------
>AtLEC2   --------->CCA1(2)        --------->ICU4 --------->DAG2 --------->DAG2      --------->ZAT14
--------TGA2(1)--------->ZAT6    --------->YAB1  ---------->DOF2---------->DOF2   ------>ZmHOX2a(1)
 
gatgtcattttggatataacacgagttgtcaacttgtcatgatcgagaaagcaaaagtaaacaaacaaaaagtgtttctacactcctctaaactccaagg  15417300
                             <---------PCF5
                             <------ZmHOX2a(1)    <---------ALFIN1
                    ================HOX2a_HOX2a  --------->ZAT14
                    ------>ZmHOX2a(2)     ----------->GT1  ---------->DOF2
--------->ANAC46   <------ZmHOX2a(2)      --------->HSFB2a(1)                  ----------->GT1
--------->ANAC58   =================HOX2a_HOX2a  <---------ZAT14              --------->DAG2
--------->ANAC58<---------ANAC58          <---------HSFB2a(1)                ---------->DOF2
-->ANAC46       <---------ANAC58<---------ALFIN1<-----------GT1    ----------->GT1       --------->ARR11(3)
 
agcaagcaatatcgaagttgcgatctcatgcaggaccactggagaaggtttctacactcttctaaagctacagaaaaaaaaaaagtatataagaaattgt  15417400
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AGI:  At2g36740.1   
Description:  ATSWC2/SWC2; DNA binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO62234.1); contains InterPro domain YL1 nuclear; (InterPro:IPR008895); contains InterPro domain YL1 nuclear, C-terminal (InterPro:IPR013272)
Range:  from: 15413769    to: 15416914    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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