Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                          ------->TEIL                                                                                          <---------ARR14(2)                                                                                       <---------ANAC58                                                                                       <---------ANAC55(1)                                                                                       <---------ANAC46                                                                                       <---------ANAC55(2)                                                                                       ----------->GT1                                             <---------ARR11(3)          ------->TEIL  <---------ANAC58                                             --------->ARR11(3)         <---------CCA1(2) --------->ARR14(2)                                             --------->ARR14(2)    <----------DOF2   <---------TGA2(2)                                             <---------ARR14(2)   <---------ANAC58  ----------->TGA1             <---------MYB46(3)             <------ZmHOX2a(1)<----------DOF2    <---------At4g35610        ---------->DOF2        ---------->DOF2    --------->YAB1  <---------ANAC58  ----------->HVH21   cgatgagatggaaagttgttgaacttattgtataaaagcttagagaggatattgataagtcgtcttttgcttttgtatctacagctatgacgtatattgt  15285400                                    <-----------RAV1(1)                        <---------RVE1(1)                       <---------AHL20(1)                       --------->ARR11(3)                       <---------ARR11(3)                   <-------TEIL           <---------YAB1                    <---------TOE2(3)  --------->ALFIN1   <---------GLK1(2)  <---------RVE1(1)                   ---------->DOF2 <---------ANAC46   ---------->DOF2        <---------CCA1(1)       <---------ATHB12--------->AHL20(1)    --------->ALFIN1               --------->ARR11(3) ---->GT1---------->DOF2<---------CCA1(1) <---------AtMYB61--------->CCA1(2)<---------ARR11(3)   ttaatccaaatcaaagtgttttaaagatattttggtttctggtggaggtggtatactaaagattcacatatagatagagatatttatgaatacattgata  15285500                                                           --------->ATHB12                                                          <---------YAB1                                                        --------->CCA1(2)                                                     <------MYB46(1)                                                     <------MYB83                                                  <---------ANAC46                       <---------MYB52(1)                                                 <------MYB46(1)                         ---------->ID1                                                 --------->ATHB12                       <-------GAMYB                                                 <------MYB83  <------MYB83            <---------ANAC58                                                 --------->MYB55(2)           <------MYB46(1)                                             --------->ATHB12  <------MYB46(1)<------MYB83                                <---------------AtSPL8 --------->ARR14(2)    --------->MYB46(2)                                --------------->AtSPL8 <---------ARR14(2)    --------->MYB59                             <---------AHL20(2)  <---------MYB46(3)        <---------MYB52(1)<-------                          <---------------AGL15 <---------AtMYB61         <-------GAMYB<---------ANAC58                         <-----------------AGL3<---------WOX13(1)     ------------>AtMYB77  <--------    --------->YAB1 ---------->DOF2  <---------ZAT18<--------P<--------P  <---------MYB46(3) <--------   tgaaaatcatatacaatatgctaaagaacaataaatggtacacatatggattggttggatatggttggcacttggcagttaggtcattttcgttgcttta  15285600                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                            <--------                                                                                           ----------                                                                                           --------->TOE2(3)                                                                                           <---------      --------->YAB1                  --------->ANAC58                                    ===========   <----------DOF2                    --------->ANAC58                                    <----------   --------->TOE2(3)                  --------->ANAC46                                    ----------- ---DOF2                           --------->ARR14(2)          <---------AHL20(2)         ----------- -ANAC58         ----------->GT1<---------AHL20(2)       <----------DOF2              <---------DAG2 -ANAC58  <-----------GT1       --------->AHL20(2) --------->AHL20(2)                 <----------DOF2   ctaaactttaataaacagtctgtaacatttacatttatatacgccaatgccaaaaaattctttattttatgcaatggcacattttctgcttttcctttac  15285700 ------>ANAC58 ------>AtLEC2 ------>ANAC58                                                   --------->At5g28300 ------>ANAC46                                                 <---------------AtSPL8 --DOF2  <----------DOF2       <---------YAB1                  --------------->AtSPL8 ----->AGL15             <-------TEIL                         --------->RAP2.6(3) ------AGL15       ---------->DOF2<-----------GT1            --------->MYB52(1) =================================MADS_MADS                 ----------->HVH21 -------AGL1      ------>ZmHOX2a(1)               --------->AHL20(2)                ------------>CBF ------>AGL1    ----------------->AG         --------->AHL20(2)--------------->AtSPL3           <---- ------>AG   <----------DOF2  <---------AHL20(1) --------->AHL20(2)           --------->ANAC46  -----   aggcaaaaactctttctttcctaaagatgcattatttttccatttgataaaataaaaaaaacttgacggtacaaaaatacacagaagacaatcgaattaa  15285800                                                                  --------->AHL20(2)                                                              --------->AHL20(2)                                                             <---------YAB1                                                           <---------AHL20(2)                                                           <---------ICU4                                                           --------->YAB1                                                           -------->ATHB1                                                           <--------HAHB4                                                           --------->ATHB51                                                           -------->HAHB4                                                          --------->ICU4                              ----------->GT1             <---------YAB1                    <---------ANAC46                      <---------ATHB51                    <------MYB83                        --------->YAB1                         ------                    <---------ANAC55(2)                <---------YAB1                          ------                    <------MYB46(1)                    --------->AHL20(2)                    <-------                    ----------->GT1                    <---------AHL20(2)               <---------DAG2              <---------TOE1(3)                       --------->AHL20(1)                <----------DOF2              <---------TOE2(3)     <---------AHL20(2)--------->AHL20(2)               <---------ANAC58              <---------YAB1----------->GT1        --------->YAB1 <---------AHL20(2)   <---------ANAC58 --------->ICU4    --------->MYB59  --------->AHL20(2)<---------AHL20(1)           <---------ANAC58 -----ANAC55(2)    --------->MYB111(1)             --------->AHL20(2)              <---------ANAC58 ---->ANAC55(2)    --------->MYB46(2)           *TSS  <---------AHL20(2)          --------->ZAT2   gtaatgactaagtattaagattaggtgaaatggtgtaattaaaccgatgggaataatataattattatttaaatacagaaacagagcttgctttaccaaa  15285900                                            ---------->DOF2                                     --------->ANAC46                           <---------ARR14(2)               <---------TOE2(3)<-----------ARR10       <----------DOF2 >MYB83       --------->YAB1   <---------CCA1(2)     ------>MYB46(1)                           <----- >MYB46(1) ------>MYB46(1) <-----------ARR10--------->AHL20(2)               <----------DOF2  ------- --MYB59   ------>MYB83    --------->ARR14(2)        ------>MYB83---------->DOF2             --------   taccaccgaaacccactaagaatacagcaaatcgtctcttcgccattaaaacaccttcctttgcaaacaaagcttcaaactttctcttaaaacaccccca  15286000                                                --------->ARR14(2)                                         --------->At4g35610           <---------TOE1(3)                                         <---------At4g35610           <---------TOE2(3)                                       --------->ZAT18       <---------ANAC58                                       <---------ZAT14       <---------ANAC58                                   --------->SPL7        <---------ANAC58                         ------->TEIL  --------->ZAT14   <---------ANAC58    ---------->DOF2     --------->ARR14(2)      <---------ARR14(2) <----------DOF2  --------->At4g35610   <---------ARR14(2)     <------ZmHOX2a(1)<---------AtMYB61 ----ALFIN1 <---------ZAT6        <---------MYB52(1)   --------->ARR11(3)          ----------->GT1 -->LBD16   ----------->GT1      --------->At5g28300   <---------ARR11(3)<------ZmHOX2a(1)  --------- ->ANAC46--------->CCA1(2) --------->AtMYB61 <---------TOE2(3)<----------DOF2>>>>>>>>>TBF1  ---------   aatcagcaaagatagggttaatcgaagaacctcaccgtaagtccactgaggattcaagttcttgctttggtttaaggaagaagaacagcaaaaacctcaa  15286100                                                 --------->ZAT2                                                 <---------At4g35610                                                 --------->At4g35610                                             --------->ALFIN1                                           --------->At4g35610                                           <---------ZAT2                                           --------->ZAT2                                           <---------At4g35610                                          <---------ARR14(2)                                          --------->ARR14(2)                                      <---------LBD16                                     ------->GAMYB                                    ----------->HVH21                                    --------->MYB46(3)                                   ------>MYB83  <---------ZAT2                                   ------>MYB46(1)                      --------->GLK1(2)                                  --------->MYB52(1)                    <---------ARR14(2)                                 --------->TOE2(2)                      --------->ARR14(2)                                 --------->TOE1(2)                     <---------GLK1(2)    >>>>>>>>>TBF1               <---------MYB52(2)     --------->At4g35610          ------>ZmHOX2a(1) >TOE2(3)      --------->YAB1   --------->MYB46(3)     <---------At4g35610       ------>ZmHOX2a(1) >TOE1(3)   ---------->DOF2     <---------MYB55(2) --------->ALFIN1--------->At5g28300   --------->TOE2(3)   ggagaagaagaagtcaaagatgactcagagtcaaaccaacgacggagctggagctggagctgttacgacggtagaatctgttcctcctcagcctcaatct  15286200                    <---------At4g35610                    --------->At4g35610                    --------->ZAT2                    <---------ZAT2                 <---------At4g35610                 --------->ZAT2                 <---------ZAT2                 --------->At4g35610                ----------->RAV1(1)               <-----------RAV1(2)               <------NtERF2               ================RAV              --------->At4g35610              --------->LBD16             --------->DEAR3(1)             --------->RAP2.6(2)             --------->ANAC46             ----------->RAV1(1)             --------->RAP2.3(2)           <---------At4g35610           --------->At4g35610           --------->ZAT2         ================RAV                 <---------LBD16         <-----------RAV1(2)         <---------ARR14(2)         ---------->CDC5             --------->ARR14(2)         ===================RAV    <---------HSFC1(2)<---------ANAC58                         -------         ======================RAV --------->HSFC1(2)<---------ANAC58       <---------ETT(2)---------   ---------->CDC5 ----------->RAV1(1) <-----------------AGL1               --------->ETT(2)---------   cagcctcagcctcagccgcagcagcagagcaacgagatggttctgcatacgggaagcttgagttttagtagtcatatgtcgagagaagacgaagagatga  15286300  Previous    Next  AGI:  At2g36410.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G52920.1); similar to unknown [Populus trichocarpa] (GB:ABK93998.1); contains InterPro domain Protein of unknown function DUF662 (InterPro:IPR007033) Range:  from: 15285848    to: 15287683    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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