Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->AHL20(2)         <------MYB46(1)         <------MYB83         ----------->GT1        --------->MYB46(2)        --------->MYB59        <---------MYB46(3)       <---------MYB55(1)                            ------>ZmHOX2a(1)      <---------MYB52(1)                     <---------RVE1(1)    <---------ANAC58  --------->MYB52(1)     <---------CCA1(1)    <---------ANAC58  <-----------GT1       <---------ARR11(3) -------AHL20(2)  <---------AHL20(2)        --------->ARR11(3)      --------->ARR14(2) ------AHL20(2)  --------->AHL20(2)        --------->YAB1           ---------->TaMYB80 ---AHL20(2)   --------->YAB1             <---------YAB1  --------->YAB1 -->AHL20(2)  <---------YAB1       <-----------GT1  --------->TOE2(3)     <----------DOF2   <-------- --AHL20(2)   --------->ICU4    <---------ICU4   <-----------GT1    <---------ARR14(2)  <---------GLK1(2)   ttattgtcgtttggtaataataaataacagttcatgtttacaatatgatattttccttattcatacttggtatatgctttattctctagtgattctcatt  15270900                                              <---------REM1(1)                                           <-----------RAV1(1)                                    --------->ANAC58                                   ----------->RAV1(1)                                    ----------->GT1                   <---------ANAC55(2)    <---------CCA1(1)               --------->ANAC58                  <---------ANAC55(1)          <-    <---------RVE1(1)            <---------ATHB12                     --------->ANAC55(2)        ----   --------->ARR11(3)        <---------------AGL15                    <---------ANAC58<---------bZIP60(1)   <---------AHL20(1)        --------------->AGL15                    <---------ANAC58--------->bZIP60(1)   --------->AHL20(1)       ----------------->AGL1                 <---------MYB52(1)<<<<<<<GRF7 ----   <---------ARR11(3)       ----------------->AGL2          <----------DOF2        ----------->HVH21<  --------->YAB1            ----------------->AGL3         <---------ANAC58      ==================RAV -YAB1                      ----------------->AG           <---------ANAC58      ----------->RAV1(2)-   acaaagatatttgtgcaagtttggactcgtcccaaatcaagaaaaatgttgtagtcaaaatgcttttcagttacgagtctgaaacctgacaacacaaaat  15271000                                                                                            <--------                                                                                    --------->ATHB12                                                                                    --------->ATHB51                                                                                    <---------ICU4                                                                                    <------------ATHB5                                                                                    <--------ATHB1                                                                                    --------->YAB1                           <---------ATHB12                                        <---------YAB1                        ------>ZmHOX2a(1)                                          --------->ICU4              --------->AHL20(2)                                                   <---------ATHB12          <---------AHL20(2)--------->YAB1                                         <---------ATHB51 --------YAB1 <---------AHL20(2)                   <---------AHL20(2)         --------->ANAC58 ----->AHL20(2)        <---------MYB59            --------->AHL20(2)          --------->ANAC58 ----->YAB1  <---------AHL20(2)             ------>ZmHOX2a(1)            ---------->DOF2    --------- ---------AHL20(2)   ---------->ID1      ---------->ID1               --------->At5g28300<---------TOE2(3) -------->AHL20(2)  <-----------GT1     <-----------GT1              ----------->GT1-------->ATHB1   tataaattgtttttatttattttttcctaatcaaaacgattttttcctaatataaaatttgatattttgaggggtaaaagaagcaataattgagaatatt  15271100                                                            ------->MYC2                                                            ------->MYC4                                                            <-------MYC2                                                            -------->ABF1                                                            ------->MYC3                                                            <-------MYC4                                                            ------->PIF5                         --------->ATHB12                   <-------PIF5                        ----------->HVH21                   <-------MYC3                       ==============================================bZIP_DOF                       <----------DOF2                     <---------TGA1a               ===================bZIP_DOF                 --------->ANAC55(2)               <---------TGA1a                             --------->TGA1a               --------->O2                        <---------YAB1               <---------bZIP60(1)         <---------ARR11(3)                               <--------               --------->bZIP60(1)         --------->ARR11(3)--------->ALFIN1               <--------               <---------bZIP60(2)        --------->CCA1(1)--------->O2                     <--------               --------->TGA1a            --------->RVE1(1)<---------O2                    <-------TEIL -ARR14(2)     <---------O2           --------->AHL20(2)   --------->ANAC46             --------->At4g35610 >GLK1(2)   ----------->TGA1   --------->PCF2      --------->ICU4           --------->DEAR3(1)   gagatactaaaattgtgacgagacgcttgatgggttccacttaaatatctgatatgattacacgtggcagactatgctccgtccctaatgagcttcgtgt  15271200                                                            <---------ICU4                                                         <---------AHL20(2)                                                        <---------AHL20(1)                                                        --------->AHL20(2)                                                        <---------AHL20(2)                                                    --------->AHL20(2)       <---------AHL20(2)                           <---------AHL20(2)      <---------AHL20(2)                        --------->AHL20(1)                                 <-      --------->AHL20(2)                        --------->AHL20(2)                              <----     <---------WOX13(1)                         <---------AHL20(2)                          <--------  <---------YAB1               <---------ANAC46 <---------AHL20(1)                   <---------AHL20(2) -ANAC46                      ---------->ID1<---------AHL20(2)     <-----------GT1<---------ARR11(3) -ANAC58                <---------YAB1     --------->AHL20(2)  <---------AHL20(2) --------->ARR11(3) -ANAC58           <----------DOF2         <---------AHL20(2) <---------YAB1    <---------TOE2(3)  <-   gattttgattaattttgttaacttttatttttgtcgtctagttttttaaatttattaattaatttttatttatcttctaatttagattttattcctttaa  15271300                                                                                 ------->TEIL                                                                                 <-------TEIL                                                                                 --------->SPL7                                                                                 <---------TOE2(2)                                                                               <---------SPL7--------                                                                              <---------ANAC58                             <---------ARR11(3)                               <---------ANAC58 --------DAG2            ---------->DOF2                                     --------------->AtSPL3 -----TOE1(3)          <---------HSFB2a(2)                                <-----------RAV1(2)<------- --DOF2   ------>ZmHOX2a(1)  --------->ARR11(3)                         <-----------HVH21 ------>ZmHOX2a(1) ---------DOF2  *TSS   --------->HSFB2a(2)                        <-----------GT1<---------TOE1(2)   gctttttcgctcctcactctctcttcccaaagttctctgtaaaactctctctccgtcttcaatggtttacacgatttcaggcgtacgttttcctcatctt  15271400                                                  <------ZmHOX2a(1)                                                 --------->LBD16                                               <---------LBD16                                               <-----------RAV1(2)                                             ------>ZmHOX2a(2)                                            <------ZmHOX2a(2)                                            <---------GLK1(1)                                            =============HOX2a_HOX2a                                           --------->ARR14(2)                                           --------->ARR14(3)                                           <---------ARR11(3)                                           <---------AGP1                                           --------->ARR11(3)                                       --------->YAB1 --------->ANAC58                          <---------ZAT14  <---------ARR14(2)                                       <                          --------->ZAT14  <-----------ARR10                        <------ZmHOX2a(1) ->At4g35610         <---------CCA1(2)<---------ATHB12--------->ANAC58          <------ZmHOX2a(1) --- --At4g35610>>>>>>>>>TBF1 <---------REM1(2)<---------ARR14(3)                 <---------TOE2(3)   <--   ccatcgattaagaagaagaattcgtctcttcacagtttcaatgaagatctcaggagaagcaacgctgtctcattctctctgaggaaggactctcgttctt  15271500                               <---------ANAC46                               <---------ANAC58                               <---------ANAC58                             <---------AtLEC2                          <---------ARR11(3)                            --------->GLK1(1)          <---------ALFIN1--------->ARR11(3)                       <------MYB46(1) ---------MYB52(1)       <---------CCA1(2)------>ZmHOX2a(1)        <------MYB83 ------>HSFB2a(2)<----------DOF2--------->LBD16              --------->HSFB2a(2)         --------->ALFIN1 -------HSFB2a(2)--------------------->WRI1         <---------LBD16----------->GT1       <-----------RAV1(1)   ctggtatttgctccatctcctttgtttatatctccgtgtgtctccttctagtggcacgggtttcgagattggtgatttccatggagtcaatgtgtgggat  15271600                         --------->KAN4(2)                        <---------HSFB2a(1)                        --------->KAN4(1)                        <---------HSFC1(2)              <---------AHL20(2)                          <                        --------->HSFB2a(1)         <---------ANAC46                               <-                        <---------KAN4(1)         <---------ANAC46                                 --                       <---------KAN4(2)          <------MYB46(1)                           ---------            ------>ZmHOX2a(1)                     <------MYB83                          =============        <---------ARR14(2)               <------ZmHOX2a(1)  --------->YAB1 <---------MYB46(3)      --        --------->ARR14(2)   <----------DOF2 <---------AHL20(2)           <--------P    <------ZmHOX2a(1)       <---------CCA1(2)--------->HSFC1(2)  --------->AHL20(2)           <-------GAMYB  ============= <---------DAG2  <---------ANAC46        ----------->GT1<---------YAB1  <---------MYB46(3) --------->ARR11(3)   tcaatttttgtatcctgcttcgtggaacattcttttttatggaggattaatttggtgtataattagaatttagatggttgatgaagtttaggagataatg  15271700         <---------ARR14(2)         --------->ARR14(2)      <---------TOE2(3)  <----------DOF2 ------>ZmHOX2a(2) ------ZmHOX2a(2) --------ARR11(3) --------->ICU4 ------->AGP1     ----------->TGA1         --------->HSFB2a(2)----------->GT1                   <---- >ICU4<---------TOE1(3)      <-----------GT1                  <------MYB46(1)                 <------ =======HOX2a_HOX2a     ------->TEIL       <---------HSFB2a(2)<------MYB83                 <---------ANAC58 ------->ARR11(3) <---------ATHB12        <---------LBD16    <---------TOE2(3)             <---------ANAC58 ======HOX2a_HOX2a----------->HVH21 <-------TEIL             --------->MYB59           ---------->DOF2   agatctttgaggtttcggcaatgacgaatttatacatgttcgtctctggaattttggtgatattaggtttataagaccaagtttcgacttaatgcgagct  15271800  Previous    Next  AGI:  At2g36380.1    Description:  ATPDR6/PDR6 (PLEIOTROPIC DRUG RESISTANCE 6); ATPase, coupled to transmembrane movement of substances. Identical to Pleiotropic drug resistance protein 6 (PDR6) [Arabidopsis Thaliana] (GB:Q7PC87;GB:Q56YS3;GB:Q9SJR6); similar to ATPDR12/PDR12 (PLEIOTROPIC DRUG RESISTANCE 12), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G15520.1); similar to ATPDR11/PDR11 (PLEIOTROPIC DRUG RESISTANCE 11), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G66950.1); similar to ATPDR1/PDR1 (PLEIOTROPIC DRUG RESISTANCE 1), ATPase, coupled to transmembrane movement of substances [Arabi Range:  from: 15264662    to: 15270845    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g36390.1    Description:  SBE2.1 (STARCH BRANCHING ENZYME 2.1); 1,4-alpha-glucan branching enzyme. similar to SBE2.2 (STARCH BRANCHING ENZYME 2.2), 1,4-alpha-glucan branching enzyme [Arabidopsis thaliana] (TAIR:AT5G03650.1); similar to starch branching enzyme I [Pisum sativum] (GB:CAA56319.1); similar to starch branching enzyme II-2 [Malus x domestica] (GB:ABO31359.1); similar to starch branching enzyme II-1 [Malus x domestica] (GB:ABO31358.1); contains InterPro domain Glycoside hydrolase, family 13, N-terminal; (InterPro:IPR004193); contains InterPro domain Glycosyl hydrolase, family 13, all-beta; (InterPro:IPR013780); contains InterPro domain Immunoglobulin E-set (I Range:  from: 15271316    to: 15277171    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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