Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                ------>ZmHOX2a(2)                                                      <---------ZAT18       <---------ARR11(3)              <---------ARR14(2)                     <---------ANAC58       <---------AGP1       --------->At4g35610                           <---------ANAC46       --------->ARR14(2)       <---------At4g35610                     --------->ATHB12             <---------ARR14(2)       <---------ZAT2                         <---------YAB1                --------->ARR11(3)      <       --------->ZAT2                        <---------ARR11(1)            <---------CCA1(2)      <-- ----->MYB52(1)  ----------->HVH21          <---------CCA1(2)        <---------ANAC58           ----- ---->ICU4    --------->ARR14(2)          --------->YAB1          <-----------GT1               <---- -->YAB1  <---------LBD16        ------>ZmHOX2a(1)   <---------ANAC58<---------ANAC58           -----   aatggagtcagcttcggatttgacacattgtcttcctagctcaatcgtatcattggtgtgcttctgtttttccttgtggatctatatatgtaagcctgtg  15060300            <---------ZAT14        --------->ANAC46     --------->ZAT18     <---------ZAT18     --------->ZAT14     <---------ZAT14   --------->REM1(2)   <---------ZAT14   --------->ZAT18   <---------ZAT18   --------->ZAT14                                                 --------->HSFB2a(2) --------------->AtSPL8                --------->MYB52(1)------>MYB46(1) <---------------AtSPL8           <---------AHL20(1)     ------>MYB83 ---------ANAC46                  --------->AHL20(1)   ------->GAMYB                 ------>ZmHOX2a(1) -------ANAC46            <---------ANAC46      <---------TOE2(3)  <---------HSFB2a(2) ---->ZAT14 --------->ZAT14       --------->AHL20(2)  --------->MYB46(3)    ------>ZmHOX2a(1) -----ZAT14 <---------REM1(2)     <---------AHL20(2)<-----------GT1--------------->AtSPL8           < ---->REM1(2)--------->ANAC46--------->ZAT18<----------DOF2<----------DOF2 --------->TOE2(3)       <-   tagtgtgtacactctacacaaattggttatgtgcaataaaataccggtttaagttaaccaactttgtttccagtactccttaatctcctccatctggttt  15060400                                                                            ----------->HVH21                                                           <---------ARR11(3)                                                           --------->ARR11(3)     <---------YAB1                                        --------->AHL20(1)   <---------ICU4                                          <---------AHL20(2)  <---------bZIP60(1)   --------->YAB1                                  --------->TOE2(3)      ----------->GT1      ------  <---------YAB1         <---------ZAT6     --------->ANAC58     <---------TOE2(3)             <-----  <---------ATHB12     <---------ANAC46     --------->ANAC58    ---------->DOF2--------->bZIP60(1) -----------GT1  ---------->ID1           ---------->DOF2  --------->AHL20(2)  --------->TGA2(1) --------AHL20(2)<---------TOE2(3)   ---------->DOF2       <---------AHL20(1)  <---------TGA2(1)   tttaatcattcttcaatttgtggttttgtgttaaaaaaaaaaaggaaagcaaacctttgaatatattaaagaaaattggtgacatcattcggcgtttcta  15060500                                                                   --------->YAB1                                                                 <---------YAB1                    <-                                                              --------->AHL20(1)             --------                                                              <---------AHL20(2)             ------->GAMYB                                                              --------->AHL20(2)           <---------At5g28300                   <---------At5g28300                   --------->AHL20(2)               <----------             ----------------->AGL1                      <---------AHL20(2)               <---------ARR14(2)             ----------------->AGL3                     --------->AHL20(2)           <---------ANAC58         <-------GAMYB                       ----------->GT1 --------->AHL20(2)      <---------ANAC58        <-----------RAV1(1)                ---------->DOF2   <---------AHL20(2)      <---------ANAC46    --------->At4g35610      --------->ANAC55(2)    --------->AHL20(1)               <---------ANAC55(1) <---------At4g35610         --------->TOE2(3)     <---------AHL20(2)                <---------ANAC55(2) --->HSFB2a(2)<---------------AGL15 --------->ATHB12<---------AHL20(1)--------->YAB1<---------------- ----HSFB2a(2)--------------->AGL15<---------AHL20(2)<---------AHL20(2)     --------->ATHB12<--------   gtaatctgctctgttgccagttacagtatatacttaattcattagtaaagtatatatatttaattttattaataaaaacgattagtaacgtgtaaccgta  15060600                          ------------>CBF                        <-------PIF5                        ------->MYC4                        ------->PIF5                        ------->MYC2                        <-------MYC3                        ------->PIF4                        <-------PIF4                        ------->MYC3                        <-------MYC2                        <-------MYC4                    -------->P                                --------->ANAC58         --------->AHL20(1)                                   --------->ANAC58         <---------AHL20(1)                                 --------->MYB52(1)                   <--- <---------MYB52(1) ------>MYB83                        --------->ANAC58                     ------>ZmHOX2a(2) --------MYB46(3)   ------>MYB46(1) ------->GAMYB       --------->ANAC58                    <------ZmHOX2a(2) ->TOE1(3)          <---------REM1(2)           --------->ZAT18    <----------ID1          --------->ARR14(2) -GT1 <-----------TBP<---------ALFIN1   <----------DOF2--------->DAG2                      <---------ARR14(2) -------TaNAC69(2)--------->AtMYB61--------->MYB46(3) ---------->DOF2                   <------ZmHOX2a(2) ----AtMYB77 <-----------GT1  --------->AtLEC2 ------>ZmHOX2a(2)---------->DOF2--------->ARR11(3)----   gccgttggatatatattacacctacacgtgcaatgcaaccatctttcgatcgcacaaaaagcaaacgaaaggccaagagaagagctcgagatcgatccga  15060700                                                                       --------->AHL20(1)                                                                       <---------AHL20(1)                                                                       <---------AHL20(2)                          --------->ANAC58                            --------->YAB1                          --------->ANAC58                            --------->AHL20(2)                         --------->ZAT18                          <---------YAB1                         <---------ZAT14                          <---------AHL20(2)                         <-------TEIL                             --------->AHL20(2)              <---------GLK1(2)                                --------->AHL20(2)              <---------ARR14(2)                               --------->AHL20(1)              --------->ARR14(2)                               <---------AHL20(1)  *TSS      ----------->ARR10---------->DOF2              --------------->AGL15 ------ARR14(2)    <---------LBD16                  <----------DOF2  <---------YAB1 ----->ARR14(2)--------->GLK1(2)             <----------DOF2  <---------CCA1(2)          ------>ZmHOX2a(1)   atttgtggcaaaatcagattctctgggtacacaaagttttctcttcactttcatctttttcttcatatattattatattcgattttgcatcctgctctgt  15060800                              <---------WOX13(1)                           ----------->HVH21                  --------->YAB1               --------->WOX13(1)                                  <----------DOF2 <---------ZAT14 <---------ATHB12  <-------TEIL              <---------YAB1                 <--------   gagtgttcttctaattccaatcactatctctgactgattcatgttttcagtctcatgtgtttcattatacttttgttgaattcaattacaggttttgata  15060900                     --------------->AtSPL8   <----------DOF2                                <-------                   --------->GLK1(2)          <---------DAG2                                 <-------              <---------ZAT14              <---------ALFIN1                              <---------TOE2(3)              --------->ZAT18       --------->YAB1            <---------WOX13(1)        --------->MYB52(1)            <---------------AtSPL8 <---------ZAT6          --------->AHL20(2)      <---------AHL20(2)         <---------ANAC58  --------->ICU4 ------>ZmHOX2a(2)<---------AHL20(2)--------->YAB1  -------- -YAB1   <---------ANAC58------->TEIL <---------YAB1     <----------DOF2  --------->GLK1(1)  --------   ctccatagatagagtgtgtacaatctgtacttatttagtgatgatccactttttgtattctttaattgaatttgagaaatcatattgaattaacgaatat  15061000                          --------->YAB1                  --------->ICU4              ----------->GT1                          <---------ICU4                  <---------YAB1------>ZmHOX2a(2)        <------ZmHOX2a(1) <------------ATHB5      ------>ZmHOX2a(1)   <---------ARR11(3)         ----     <---------LBD16     --------->ICU4        ================================HOX2a_HOX2a    ------- --KAN4(2)               <---------ATHB12      ------>ZmHOX2a(1)      --------->ARR11(3)      <------ --ARR14(2)            --------->WOX13(1)<---------ARR11(3)  <---------WOX13(1)      <---------TOE2(3) -->TaMYB80    <---------ARR11(3)        --------->ARR11(3)--------->ATHB12   --------->YAB1--------- ->ARR14(2)    --------->ARR11(3)<---------ANAC46 =============================HOX2a_HOX2a ----------   gctaacttcaggaagacgatattagcaatcatggagcgtctaacatctcctcctcgtttgatgattgtctctgatcttgatcatactatggtataaagct  15061100                                                                        <---------ARR11(3)                                                                        --------->ARR11(3)                                                                    --------->YAB1                                               <---------WOX13(1)   <---------ICU4       <---------ANAC58                    xxxxxxxxxxxxxxxxxxx>smallRNA(si3)------>ZmHOX2a(1)     <-----------GT1                  <---------WOX13(1)         --------->YAB1  <---------ICU4                    --------->ATHB12             <---------ICU4            --------->ZAT2 --------->ICU4                     <--------ATHB1           <-------TEIL   --------->LBD16--------->At4g35610 -->NtERF2 <----------DOF2         --------->ICU4         <------MYB83<---------YAB1       <---------At4g35610 -->At4g35610                      <---------YAB1 <---------ANAC58 --------->ICU4<-----------ARR10 ---At4g35610                     <---------WOX13(1)     <---------AtMYB61 --------->TOE1(2)       <- >DAG2 <---------ANAC58       <---------WOX13(1)  <---------ANAC58 <---------YAB1--------->GLK1(2)--- >DOF2 --------->ANAC55(2)  --------->ATHB12<---------YAB1<------MYB46(1) ------>ZmHOX2a(2)<---------ZAT2   gccatttttacgtctttttaaaagtttgtttgattgaatgattgatgtgattgtttgtgtaggttgatcatcatgatcctgagaatctatctctgctgag  15061200  Previous    Next  AGI:  At2g35830.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G35810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69007.1) Range:  from: 15059341    to: 15060343    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g35840.1    Description:  sucrose-phosphatase 1 (SPP1). similar to sucrose-phosphatase, putative [Arabidopsis thaliana] (TAIR:AT1G51420.1); similar to sucrose phosphate phosphatase [Malus x domestica] (GB:AAS79792.1); contains InterPro domain Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679); contains InterPro domain HAD-superfamily hydrolase, subfamily IIB; (InterPro:IPR006379); contains InterPro domain Sucrose phosphatase, plant and cyanobacteria (InterPro:IPR012847); contains InterPro domain Sucrose-6F-phosphate phosphohydrolase, plant and cyanobacteria (InterPro:IPR006380); contains InterPro domain Sucrose-phosphate phosphatase (InterPro:IPR0063 Range:  from: 15060702    to: 15063084    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version