Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <-----------GT1          <---------AHL20(2)          --------->AHL20(1)                                      <---------YAB1          --------->AHL20(2)                                     <-----------GT1      <---------AHL20(2)                   <---------AHL20(2) <---------AHL20(1)      <---------AHL20(1)                   --------->AHL20(2) --------->AHL20(1)                 ----      --------->AHL20(2)            --------->YAB1            <---------ARR11(3)                 <---   gccatcaaaaaattttttaacaaaatttagtctgtttatcaaaattttaatatagatgattcaatattttcatttttaagagcattttgtctgcaaattt  14999200                                                                                  ---------->DOF2                                                                                <---------ATHB12                    <---------AHL20(2)                                        ------>MYB46(1)                <---------GLK1(2)                                             ------>MYB83        --------->YAB1                 <---------ANAC58                     <---------MYB111(1)        --------->ANAC46               <-------GAMYB                        <---------MYB59        --------->ANAC55(2) --------->TOE2(3)                              --------->ANAC55(1)       <-------TEIL <---------YAB1     <---------ANAC58                    --------->ANAC46    --------->CCA1(2)  <---------YAB1 <------MYB46(1)                      --------->ANAC58 ----->AHL20(2) --------->ARR11(3)    <------MYB83 <---------CCA1(2)       --------->ANAC58     ----- ------AHL20(2) <---------ARR11(3)   --------->MYB59------->TEIL  <---------REM1(1)          --------   taaatgatatacataatagatttttattaatctcaaaatttggttgtgaagttgtatctacttctgtgatgaagcacacctaatcaaagaagagtcaatc  14999300                                                                          --------->ARR11(3)                                                                       --------->AHL20(2)                                                                  <---------At4g35610                                                           --------->AHL20(1)                                                           <---------ARR11(3)                                <---------ANAC58           <---------AHL20(1)                                <---------ANAC58           <---------AHL20(2)                                <---------ANAC46           --------->AHL20(2)                    <---------ANAC46                       --------->ARR11(3)                    <---------ANAC58                      --------->AHL20(2) ---->TOE2(3)       <---------ANAC58  --------->YAB1  --------->AHL20(2)  <---------AHL20(1)   ------ ->WOX13(1)  <----------DOF2<----------DOF2         ----------->GT1 <----------DOF2          --------   tcaaaatataagactctttcttacttgtgtcttttcgtagtcatatttttaaaaatgtaaatatattcagcttttatatattcttcaacaaaaaaaaaaa  14999400                                                                      --------->ICU4             --------->GLK1(1)                                     --------->AHL20(2)              <-            --------->ARR11(3)                                     <---------AHL20(2)      --------->GLK1(2)      --------->YAB1                                 <---------AHL20(2)          <---------ANAC55(1)   --------->YAB1                     <---------TOE2(3)            --------->AHL20(1)     <---------GLK1(2) --->AHL20(2)<---------GLK1(1)       <---------DOF5.7(2)          --------->AHL20(2)--------->REM1(2) ->AHL20(2) <---------ARR11(3)       --------->MYB52(1)   <----------DOF2        <---------ANAC46----   tataacaataagaagatttcttatttgtagtcttgtagataacgttctcttctattttttcttttaaaaaaaattatgaagttatgtgtagagattctat  14999500                                                                          <---------MYB52(1)                                                                  --------->ARR11(3)                                                              ---------->DOF2              ------>ZmHOX2a(1)                                 --------->ZAT14             <---------WRKY12             --------->TOE2(3)                                 <---------ZAT18             <---------WRKY38(1)        ------>MYB46(1)   <-----------------AGL1        --------->ZAT18     <---------YAB1      <---------RAP2.6(3)   ----------------->AGL1  <-----------GT1  <-----------GT1<-----------HVH21       <-----------GT1  - --------YAB1        ------->TEIL<---------ZAT14 <----------DOF2  <---------ARR11(3)    ------>MYB83< ----->YAB1       --------->AtLEC2        <----------DOF2 <----------ID1 <-------GAMYB<---------MYB59   tatgtttcatattgggaaacatgcacattttccagtccactattctttactctttataatgggtcaaaggtctgccgttacagttttaccttccttacta  14999600                            <---------AHL20(2)                         --------->TOE1(3)                                                ------>ZmHOX2a(2)                         --------->TOE2(3)                                              --------->ARR11(3)                    <---------MYB52(2)                                      <---------HSFB2a(1)                   <---------At4g35610                               --------->KAN4(2)  <---------ARR11(3)                   --------->At4g35610                               --------------------->WRI1           <------------CBF--------->AHL20(2)            ----------->GT1    --------->HSFC1(2)        ------------>CBF<-----------------AGL3           <---------MYB46(3) --------->HSFB2a(1)  ----------->TBP  <---------ZAT2                  ---------->DOF2 <---------YAB1      --------->YAB1 -------->AHL20(2) <------NtERF2            *TSS--------->At5g28300<------ZmHOX2a(2)  <---------ATHB12 -----------TBP    --------->ZAT2         --------->AtLEC2<-------GAMYB     <---------HSFC1(2)   gtttatatatcgcaattgggcagctaacattaaatggctatttcatgcacagtgaaagatggttagacgatcattcggagtttcgccaatgatctataca  14999700                                      --------->LBD16                                     <---------ANAC58                      --------->At4g35610                                     <---------ANAC46                      <---------At4g35610                                     <---------ANAC55(1)              ----------->HVH21                                     <---------AtLEC2                <-----------HVH21                               <---------YAB1                       --------->bZIP60(1)                              <---------AHL20(2)                    <---------ANAC58               <---------ARR11(3)    <---------ANAC58               <---------bZIP60(2)           <---------ANAC58   --------->AHL20(2)                    <---------bZIP60(1)        ------           <---------ANAC58  <---------AHL20(2)                     <---------ANAC55(2)        <-----      --------->ATHB12       --------->AHL20(2)                     <---------ANAC46      --------->WOX13(1)    <---------WOX13(1)       --------->YAB1                         <---------ANAC58  --------->WOX13(1)  --------->ATHB12     <---------At4g35610 <------ZmHOX2a(2)        --------->ANAC55(2) <---------ATHB12   tgtttcattgatttcttgatatttctgctaattaaaattgcgtggatcacagtctaattcaatgtttatggcgtgacagcttatagattaatcaagcaga  14999800                                                        --------->YAB1                                                       <---------YAB1                                                       --------->ICU4                                                     --------->YAB1                                                    <---------YAB1                                                    --------->ICU4                                                  --------->YAB1                      <---------ARR11(3)                                                 <---------YAB1                       --------->ARR11(3)                                                 --------->ICU4                      --------->CCA1(1)                                               --------->YAB1   <---------YAB1       --------->RVE1(1)             --------->SPL7                   <---------YAB1  --------->YAB1     --------->AHL20(2)           <---------SPL7                     --------->ICU4 <---------YAB1  --------->YAB1         <-------TEIL                       --------->YAB1 --------->YAB1   ----------->GT1         ----------------->AGL1             <XXXXXXXXXXXXXXXXXXXXMIR414   --------->YAB1    <------ZmHOX2a(1)                      <---------YAB1 --------->ICU4 --------->ICU4 --------->YAB1 --->At4g35610             --------->ALFIN1--------->ICU4 <---------YAB1 <---------YAB1<---------YAB1 ----At4g35610 <---------LBD16           <---------At4g35610 --------->ICU4 <---------YAB1        <--   tggctaggaagtccatacgggggaaggaagtggtaatggtttctgatgatgatgatgatgatgatgatgatgttgatgatgataaaaatatcatcaaatg  14999900                                                          --------->YAB1                                                         <---------YAB1                                                         --------->ICU4                                                       -------->HAHB4                                                       <---------ICU4                                                       --------->YAB1   <---------YAB1                                                      <---------YAB1  --------->YAB1                                                    <---------ICU4   --------->ICU4                                                    --------->YAB1 --------->YAB1                                                   --------->ICU4 <---------YAB1                                                 --------->YAB1 --------->YAB1                                                <---------YAB1 --------->ICU4                                              <---------At4g35610 --------->ICU4                       --------->ARR11(3)    <---------YAB1    <---------YAB1                       --------->GLK1(2)  --------->GLK1(2)  --------->YAB1                      <---------GLK1(2)  <---------ARR14(2) --------->ICU4               <---------ZAT14           <---------GLK1(2)<XXXXXXXXXXXXXXXXXXXXMIR414           --------->ZAT6                --------->ARR14(2) <---------YAB1      <---------TOE2(3) ---------HVH21--------->ZAT14      --------->MYB52(1)--------->ICU4 <---------YAB1   tgtcaaacctcttacagtatacaagaatcttgaaactccaacggattctgatgataatgatgatgatgatgatgatgatgttgatgttgatgaaaacatc  15000000                                                                                             --------              <-----------RAV1(1)                                                  <------MYB46(1)    <---------ARR11(3)      --------->ANAC46                                       <------MYB83    --------->ARR11(3)      --------->ANAC58                                       ----------->GT1    --------->AHL20(1)      --------->ANAC58                                      --------->MYB46(2)    <---------AHL20(1) --------->ZAT14                               <----------DOF2         <-------TEIL   --------->AHL20(2)  <---------ZAT14                --------->MYB52(1)          --------->MYB59  <-   atcaaatatatcaaacctgttgcagtatacaagaaacttgaaactcgctcaaaaaacaacgtatgcattctcttttttgtttgtttggtaatatgtgcat  15000100  Previous    Next  AGI:  At2g35670.1    Description:  FIS2 (FERTILIZATION INDEPENDENT SEED 2); transcription factor. Identical to Polycomb group protein FERTILIZATION-INDEPENDENT SEED 2 (FIS2) [Arabidopsis Thaliana] (GB:Q9ZNT9;GB:Q9ZQP0); similar to VRN2 (REDUCED VERNALIZATION RESPONSE 2), transcription factor [Arabidopsis thaliana] (TAIR:AT4G16845.1); similar to VRN2 (REDUCED VERNALIZATION RESPONSE 2) [Arabidopsis thaliana] (TAIR:AT4G16845.2); similar to hypothetical protein OsJ_027647 [Oryza sativa (japonica cultivar-group)] (GB:EAZ44164.1); similar to hypothetical protein OsI_029770 [Oryza sativa (indica cultivar-group)] (GB:EAZ08538.1); similar to Os09g0306800 [Oryza sativa (japonica cultiva Range:  from: 14999644    to: 15003835    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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