Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------AtLEC2             --------->ZAT2             --------->ZAT14             <---------At4g35610                                               ------>MYB46(1)             <---------ZAT2                 <-------GAMYB      --------->WRKY38(1)                  -             <---------ZAT14            <---------LBD16        --------->WRKY12--------->MYB52(1) <--             --------->At4g35610       <---------LBD16     --------->DAG2      ------>MYB83    ------         --------->AtMYB61          --------->GLK1(2)     ---------->DOF2 <-----------GT1     <------        --------->ZAT18         --------->YAB1    --------->ANAC46    ------>ZmHOX2a(1)     ---------   agagtctaagaccactgctgagcatggccttctgtgataatctcggggttatacgttgctaaaagttgactcctagtcaccaaatggcatagttttataa  14989500                                      ------>ZmHOX2a(1)                                     --------->TOE2(3)                                     --------->TOE1(3)                                    ------>ZmHOX2a(2)           ==================================HOX2a_HOX2a           ------>ZmHOX2a(2)      <---------ARR11(3)           <-----------------------TaNAC69(2)          <------ZmHOX2a(2)       <---------ARR14(2)          ===================================HOX2a_HOX2a         --------->AGP1           --------->AGP1         <---------ARR14(2)       --------->ARR14(2)               ----------->GT1     <---------MYB52(1)           --------->ARR11(3)              --------->DAG2    <-----------HVH21 <---------ARR14(2)                         ---------->DOF2 -------->ZAT6        --------->ARR14(2)    <-------TEIL    --------------->AGL15                   < ---------GT1--------------->AtSPL8<------ZmHOX2a(2)        <---------------AGL15                 <-- --->YAB1<---------ARR11(3)      <---------GLK1(1)         ----------------->AGL1                <--- ---YAB1 --------->ARR11(3)      --------->GLK1(1)         ----------------->AGL3                <--- >YAB1   --------->ARR14(2)     ----------->ARR10          ----------------->AGL2                ----   taacactgttagatccttgtaccagttactcagtgagatccttagattcacatagagttgtcccatataaagtaaaaaaaactagagacatgaaacatag  14989600              <---------ANAC46              --------->ANAC55(2)              ----------->GT1                               --------->AHL20(2)              --------->TGA1a                           <--------HAHB4              =============================bZIP_DOF     --------->ATHB51              <---------ANAC55(2)                       -------->ATHB1              =============================bZIP_DOF     --------->AHL20(2)              <---------TGA1a                           <---------AHL20(2)              --------->O2                             <---------ATHB12         --------->YAB1                                <---------ATHB51       <-----------GT1                        <------MYB83  <---------AHL20(2) ---------AHL20(2)                            <------MYB46(1) -------RVE1(1) ----------->HVH21            <---------AtMYB61                                 <----- ------GLK1(2)<---------O2                <------ZmHOX2a(1)--------->AHL20(2)                 <------ ------ARR11(3)<-------MYC3           ---------->DOF2  --------->ICU4              --------->AHL20(2) ----->ARR11(3)------->MYC3     ---------->DOF2    ------------>CBF    <------ZmHOX2a(1)      <------   atttttttttttcatcacgtgaaacatagataagaaaagaaaaaggataggtgttcaattatttaatttagtaggaaacatagaataaaaaaacttgctt  14989700                 <---------ICU4                 --------->ATHB51                            <---------HSFB2a(2)                 --------->ATHB12                    --------->YAB1            <---------WRKY18(1)                --------->ICU4                       --------->TOE2(3)        --------->WRKY38(1)                <---------YAB1                      <<<<<<<<<ARR2             --------->WRKY12    --------->YAB1<------------CBF                  <<<<<<<<<ARR1             --------->WRKY45      < -----DOF2   --------------->AGL15                 --------->GLK1(2)          ----------->HVH21 <---- ---ANAC58   <---------------AGL15  --------->HSFB2a(2)      --------->HSFB2a(2)    <---------MYB52(1) ---ANAC58   <---------YAB1      <----------DOF2------------>CBF      ---------->DOF2  <----------DOF2   tgtttttcatattttctcattattggaatcactgtcttttcgaacttggtgacaatcttagtactagaaaacaaaagactttgaccggtctttggctcat  14989800                                                                       ==============================                                                                       ==================MYC_MYB                                                                       --------->ANAC58                                                                       --------->ANAC46                                                                       <---------TGA1a                                                                       --------->ANAC55(2)                                                                       --------->ANAC58                                                                       --------->ANAC55(1)                                                                       <---------ANAC55(2)                                                                       --------->TGA1a                               <----------DOF2                ===================bZIP_DOF                               ==================================================bZIP_DOF            <----------DOF2 <-----------GT1                   ---------->DOF2 ----------DOF2      <---------ALFIN1                       <-------TEIL                        ----- -----CCA1(2)      ----------->RAV1(1)                     --------->CCA1(2)    -------->P --------->GLK1(1)   ctctttcttctcccctttctccaacacttatttctttctctctctagttcatgaattcaagattcaaagacacacgtatggctacctcttggtaaatcca  14989900                                                                  --------->DAG2                                                                 --------->DAG2                         ------>ZmHOX2a(2)                 --------->ZAT14                   <---------At4g35610                     --------->ZAT18        --------->ARR14(2)                                 <---------ZAT18        <---------ARR14(2)                                 <---------ZAT14 ======bZIP_DOF----------->TGA1   ----------->GT1         --------->ALFIN1                        <-- ----->DOF2    ----------->HVH21 --------->ALFIN1 <---------YAB1---------->DOF2           <----------DOF2   aagagacacatatatggctgacgctgatccatcgagtggtgaacagatagttatgagagagtgcagaaaagggaattggacagtgagtgagactttggtt  14990000                                            ----------->GT1                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)                                         <---------ARR14(2)                          --------->LBD16                                    <---------DEAR3(1)                             <---------LBD16                                   --------->SPL7                               <---------GLK1(1)                                 <---------ZAT14                                <---------ZAT2                                 <---------ARR14(2)                             --------->At4g35610                                 --------->ARR14(2)                             <---------At4g35610                                 <---------SPL7                                 --------->ZAT2                                 --------->REM1(2)                              --------->GLK1(1)                                --------->ALFIN1                           <---------ZAT2                               <---------------AtSPL3                      <---------At4g35610                              <---------ANAC46                             --------->At4g35610     --------->ANAC58         <---------ANAC55(1)      --------->TOE1(3)   --------->ZAT2     --------->ANAC58         <---------ANAC58        ================================RAV   ---------->DOF2            <------------------SPL14----------->RAV1(2) ----------->RAV1(1) -------YAB1                  <---------ANAC58       -------->P     <---------MYB52(2)   ctcatagaagccaagaagatggacgaccagaggcgtgtacggcgatcggaaaaacaacctgaaggcagaaacaaaccagcagagctccggtggaaatgga  14990100                                   --------->YAB1                                 -------->P                              --------->LBD16                             --------->ANAC46--------->ZAT14                      <-----------ARR10      <---------ZAT14          <---------ANAC58 <---------At5g28300    --------->YAB1                       <------ZmHOX2a(2)          <---------ANAC58<-----------GT1<---------ICU4                               --------->ARR11(3)  <------ZmHOX2a(1)  <------ZmHOX2a(1) --------->GLK1(2)--------->ALFIN1              <---------ARR11(3)   tagaggagtattgctggagaagaggatgttaccgcaaccagaatcagtgcaacgataagtgggacaatctcatgagggattacaagaagatcagagagta  14990200                                           ------>ZmHOX2a(1)                                           --------------->AGL15                                           <---------------AGL15                                <---------MYB52(1)                                                <--                               <-----------TGA1                                            ----------                               <-----------HVH21 <---------HSFB2a(2)              <---------ARR11(3)            ----------->ARR10 --------->DEAR3(1) --------->HSFB2a(2)              --------->ARR11(3)    <------ZmHOX2a(2)    <-----------GT1  <-----------------AGL2         ---------->DOF2  ------>NtERF2   --------->ARR11(3)<----------DOF2      <-----------------AGL1        <------ZmHOX2a(1)<---------ANAC46   cgagagatcaagggtagaatcgtcttttaacaccgtcacttcttcctcttactggaagatggacaagactgagaggaaagagaagaacttgccgagtaac  14990300                                                                             <---------ANAC46                                                                            --------->RAP2.3(1)                                                                            <------NtERF2                                                                           --------->ABI4(1)                                                                           <---------ATERF1(1)                                                                          --------->RAP2.3(3)                                                                          --------->RAP2.3(2)                                                                          --------->DREB2C(2)                                                                          --------->RRTF1(3)                                                                          --------->DEAR3(1)                                                                          --------->RRTF1(2)                                                                          --------->RAP2.6(2)                                                                          --------->ATERF1(2)                                                                          <---------DEAR3(1)                                                                         --------->RRTF1(1)                                                                         --------->DEAR4(2)                                                                         --------->ERF1                                                                         --------->RAP2.3(1)                                                                         --------->ORA47(2)                                                                         --------->RAP2.6(1)                                                                         <------NtERF2                                                                         --------->ATERF1(1)                                                                        ------>NtERF2                                                                        --------->ABI4(1)                                                                        --------->At4g35610                                                                        <---------At4g35610                                                                        <---------RAP2.3(1)                                                                        <---------ATERF1(1)                                                                        <---------DREB2C(1)                                                                        <---------DEAR4(2)                                                                       --------->ATERF1(2)                                                                       --------->RAP2.6(2)                                                                       --------->ANAC46                                                                       <---------ATERF1(2)                                                                       --------->RRTF1(3)                                                                       --------->RRTF1(2)                                                                       --------->RAP2.3(2)                                                                       --------->RAP2.3(3)                                                                       <---------ALFIN1                                                                       --------->DEAR3(1)                                                                       <---------DEAR3(1)                                                                      --------->ATERF1(1)                                                                      --------->RAP2.6(1)                                                                      --------->RRTF1(1)                                                                      --------->DEAR4(2)                                                                      --------->RAP2.3(1)                                                                      --------->ERF1                                                                      <------NtERF2                                                                      --------->ORA47(2)                                                                     ------>NtERF2                                                                     --------->ABI4(1)                                                                     <---------ATERF1(1)                                                                     <---------DREB2C(1)                                                                     <---------At4g35610                                                                     <---------DEAR4(2)                                                                     --------->At4g35610                                                                     <---------RAP2.3(1)                                                                    --------->RAP2.3(3)                                                                    --------->RRTF1(2)                                                                    --------->RRTF1(3)                                                                    <---------ALFIN1                                                                    --------->ATERF1(2)                                                                    --------->ANAC46                                                                    --------->RAP2.3(2)                                                                    --------->RAP2.6(2)                                                                    <---------ATERF1(2)                                                                    --------->DEAR3(1)                                                                    <---------DEAR3(1)                                                                   --------->ATERF1(1)                                                                   --------->RAP2.6(1)                                                                   --------->RAP2.3(1)                                                                   --------->RRTF1(1)                                                                   --------->ORA47(2)                                                                   --------->ERF1                                                                   --------->DEAR4(2)                                                                  --------->LBD16                                                                  <---------ATERF1(1)                                                                  ------>NtERF2                  <---                   --------->ALFIN1                               --------->ABI4(1)       --------->MYB52(1)                 <---------O2                                     <---------At4g35610     <---------DOF5.7(2)                 --------->O2                                     --------->At4g35610   --------->DOF5.7(2)                 <---------ANAC46                                --------->DEAR3(1) --------->MYB52(1)              --------->ANAC46                                   --------->ANAC46  <---------ARR14(2)          <---------GLK1(1)                                      <---------ALFIN1 <------ZmHOX2a(1)          --------->GLK1(1)                                    <---------ATERF1(1)===================          --------->CCA1(2)                                    ------>ZmHOX2a(1)  ===================         --------->ARR11(3)                                   <---------ALFIN1<---------SPL7    -----         --------->ARR14(2)        --------->ETT(2)         ------>ZmHOX2a(1)--------->DEAR3(1)------ ---------RAV1(1)<---------bZIP60(2)                       <---------ALFIN1------>NtERF2--------->At5g28300 ->GT1   <---------ARR14(2)  <---------ZAT2              ------>ZmHOX2a(1)------------------>SPL14  -   atgttgcctcagatatacgacgtgttgtctgagcttgttgacagaaaaactcttccttcctcctcctccgccgccgccgccgtaggaaacggtaacggtg  14990400  Previous    Next  AGI:  At2g35637.1    Description:  other RNA Range:  from: 14989687    to: 14991077    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g35640.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT1G31310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44418.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005) Range:  from: 14989914    to: 14991261    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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