Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <---------ANAC58                      <---------ANAC58    <---------GLK1(1)                  <------MYB46(1)         --------->CCA1(2)                              <---------ANAC55(2)                  <------MYB83 <------ZmHOX2a(1)                                         --------->ANAC55(2)                 --------->MYB59         <---------ARR14(2)    <---------ANAC55(2)    <------ZmHOX2a(2)                 --------->MYB111(1)     --------->ARR14(2)    --------->ANAC58       =============== --------->bZIP60(1) <-------TEIL       <------ZmHOX2a(1)      --------->ANAC55(2)    =============== <---------bZIP60(1)--------->ARR11(3)<---------TOE2(3)        --------->ANAC55(1)   --------->ARR11(3) >ANAC58    ---------->DOF2 <-----------RAV1(2)                --------->ANAC58--------->ATHB12<----- >ANAC58   <---------WRKY38(1)----------->GT1      ------>NtERF2  ------->TEIL<-------TEIL    <------   ttgacatcaccagtcaaagtaggttcttggccaggaaaataaggatatgtctcggcctgaaaaacacgtatatttggagattcattagatcacttaatca  14912100                                                      <---------ANAC58                                                      <---------ANAC58                                                   <---------WOX13(1)                              <-------TEIL        <---------ANAC58                              --------->ZAT18     <---------ANAC58       --------->At4g35610    <---------ZAT18    --------->ATHB12 --------->ICU4        --------->TOE2(3)       <----------DOF2 ========================HOX2a_HOX2a           <---------WOX13(1) ------>ZmHOX2a(1)     --------->YAB1         <---------ANAC46 ======================HOX2a_HOX2a            <---------ANAC58 =======HOX2a_HOX2a --------->WOX13(1)        <---------ANAC58           --------->AHL20(2) ----ICU4         <------ZmHOX2a(2)        <---------WOX13(1)       ------>ZmHOX2a(2)         ------- ---ATHB12      <------ZmHOX2a(1)     --------->TOE2(3)<---------------AGL15               <---------   gtccttatcatctaactaggatcaatcttaagtgcatttgccttaattgcttgattgcttaacttagtgatccaaaaaattccacaatcgaattaacaaa  14912200                                                                                                    -                                                                                                    <                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  ---                                             --------->GLK1(2)                                -------                    <------ZmHOX2a(1) <---------At4g35610                        <-----------HVH21--- --->DOF2<---------PCF2           --------->ALFIN1                     <---------MYB52(1) --------->ANAC58 --GT1--------->ALFIN1     ----------------->AGL1                 --------->ANAC46        --------->ANAC58   gtgtaagagtgcgacctcttgaggagaagcccaaatgtggagatgagaatcgataactctcgaggtagacgacgttgtttctgagtcagacccagcaaaa  14912300            <---------RAP2.6(3)                                         --------->SPL7        <-----------GT1                                                 --------->ZAT14     <---------ICU4                                                     --------->SPL1(2)    --------->ICU4                                                    <---------SPL7 <------NtERF2  <---------YAB1                                      <---------------AtSPL3 ----->NtERF2   --------->ICU4                                      --------->ZAT6 ---------RAP2.6(3)                                            --------->TOE1(1) ------->RAP2.3(2)                                             --------->ANAC46 ------->DEAR3(1)                                             <---------LBD16 ------->RAP2.3(3)  <---------MYB46(3)                   <---------ANAC58 ------->RAP2.6(2) <---------WOX13(1)                    <---------ANAC58   --------->SPL7 ------->ANAC46 ------>ZmHOX2a(1)       <---------------AtSPL3--------->LBD16 ------>ERF1<---------SPL7      --------->TOE2(3)====================HOX2a_HOX2a        <------ZmHOX2a(1) --->DOF2<---------At5g28300    --------->YAB1   <------ZmHOX2a(2) <------------------SPL14--------->ATHB12 ------>RAP2.3(1)--------->ATHB12       <---------------AtSPL8------>ZmHOX2a(1)  <-----------HVH21   gccgccatttttaccgtcctgattgttgatgctatcttagtaatagtaccgatcgatttgcttcctcggaacagtacggacgacgttagaggatgactgg  14912400                                                                     <---------ARR11(3)                                                                     --------->ARR11(3)                                                              --------->ANAC55(2)                                                              <---------ANAC55(2)                                                              --------->ANAC46                                             ------>NtERF2    --------->ANAC58                                             ----------->RAV1(1)   --------->ICU4                                            --------->LBD16<---------ATHB12                                            --------->ANAC46  ----------->GT1                                            ----------->HVH21 --------->ANAC58                                            <---------ETT(1)  --------->ANAC55(1)                                          --------->ANAC46------>MYB83<---------YAB1                -                                     <---------ARR14(2)  --------->WOX13(1)                     -----               <---------MYB52(1)    --------->ARR14(2) --------->AtMYB61               ----------->GT1              --------->TOE2(3)     <---------CCA1(2)   --------->MYB46(3)         <----------DOF2 --             ----------->GT1 <---------At5g28300   *TSS------------>CBF    <---------AHL20(2)  ------     ---------->DOF2      <-----------HVH21--------->LBD16------>MYB46(1) --------->AHL20(2)   <-----   aaaatgctaaagaattcgttaatctcagagtcacagccatatccccccgacaataccaccaatcacgtaaatatcatttaatgggttttttggtaaaacg  14912500                                                        --------->DAG2      <---------YAB1                                --------->YAB1 -------->AHL20(2)                                 <---------YAB1 ------>GT1                                       <---------ARR11(3) ------->YAB1                                ------------>CBF ----->GT1                           ------------>CBF  ---------->DOF2 -----ID1                          ------>NtERF2  --------->ARR11(3)      --------------->AGL15   ataaaaatatgtttgggctatacatgtattcatgttcggcccaatagtccaatatcataaagttccaatcgaatttctacatttgtaaacaattcgattt  14912600                             --------->HSFB2a(2)                                        <------------                       --------->ARR11(3)                                               -------------                       <---------ARR11(3)                                              ------------>CBF                    <---------AHL20(2)                                     <----------DOF2       <---                  <---------AHL20(2)                                    <---------TOE1(3)   <--------      --------->ANAC46 --------->GLK1(2)    ----------->GT1        <---------AtLEC2    <-------------    --------->MYB46(3)--------->RVE1(1)  --------->ZAT6------>ZmHOX2a(1)<---------TOE2(3)  <---------DAG2   tgtataacaaacaactatatataaaaatcttccaaaattgtttacactgttaaaatcctacttgtatttgcattaagctttttttgttttccaatttttg  14912700                  <---------DAG2                  <----------DOF2     <----------DOF2  <---------TOE1(3)  <---------TOE2(3) ---AGL15      <-----------GT1                           <---------AHL20(2) -->AGL15  <---------AHL20(2)                 --------->YAB1                   ----------->TBP ------AtLEC2 <---------YAB1             <------ZmHOX2a(2)           --------->ARR11(3) -ICU4     <---------YAB1<---------ZAT6 --------->ARR11(3)           <---------ARR11(3) ----AGL1  --------->AHL20(2)           <---------ARR11(3)          <---------CCA1(2)   cattaagctttatattattactttttagtgtttgtttgataagatcaaaaatcacacatattatttgtatatatctactctatatatcggactctacctc  14912800                                                                                                <----                                                                                           <---------At5g28300                                                                                     <------NtERF2                                                                                    ------>NtERF2                                                                        ----------->GT1  --------->ARR14(2)                                                                     --------->MYB52(1)  <---------ARR14(2)                          --------->REM1(1)                --------->ANAC58         ------------>AtMYB77                     --------->ARR14(2)                    --------->ANAC46      <---------ATERF1(1)                     <---------ARR14(2)                    --------->ANAC58      <---------RAP2.3(1)-              <---------ANAC58                         <---------HSFC1(1)        <---------DEAR4(2) -              <---------ANAC46                 --------->ANAC46     <---------SPL7--------->RAP2.3(1)              <---------ANAC58                 --------->ANAC58    <---------ANAC58 ----------->RAV1(1)             --------------->AtSPL3            --------->ANAC58    <---------ANAC58--------->DEAR3(1) --------->ANAC55(2)--------->WOX13(1)------>ZmHOX2a(1)<---------HSFB2a(2)      --------->ANAC46<---- --------->ANAC46 ------------>CBF ------>ZmHOX2a(1)   --------->HSFB2a(2)    --------->MYB52(1)<----   ttcacataattcgttgccgtgccaatctacatctctcctccttctctctacgacattctcgaagccatggcgaacggattaaacggcgccagttacggtc  14912900                                                    --------->TGA1a                                                    <---------O2                                                    <---------TGA1a                                                    --------->O2                                                    <---------ANAC46                                                    ============================MYC_MYB                                                  ------>NtERF2                                                 ----------->HVH21                                                 --------->DEAR3(1)                                                <------NtERF2                                                --------->DEAR3(2)                                                --------->ATERF1(1)                                               <---------ATERF1(1)                                              --------->ARR14(2)                                              <---------ARR14(2)                                             <------NtERF2                                             --------->ZAT2                                             --------->ATERF1(1)                                             <---------At4g35610                                             <---------ZAT2                                             --------->At4g35610                                            <---------ATERF1(1)                                         =========================================MYC_MYB           <------NtERF2                 <---------bZIP60(2)          --------->MYB52(1)             =======================================MYC_MYB          ------>NtERF2                  <---------TGA1a        --------->MYB46(3)               <---------O2                 <---------AtMYB61      --------->ANAC58                   --------->O2    <---------ANAC58      --------->ANAC46                   --------->TGA1a <---------ANAC58      --------->ANAC58                   =====================bZIP_bZIP             --------->ZAT2  <    ===============================================bZIP_DOF         ============================RAV <    ---------->DOF2                     <------NtERF2   <------MYB46(1)<---------MYB46(3)           <   <---------ATHB12                     --------->ATERF1(1)      --------->ARR14(2) <---------At4g35610  ------>MYB83                         <---------ATERF1(1)       <---------ARR14(2) --------->At4g35610  ------>MYB46(1)                      ------>NtERF2==============================MYC_MYB      <----- --------->WOX13(1)                   ----------->HVH21<---------TOE2(2) <--------P <---------ZAT2 <- -----WRKY38(1)                       --------->DEAR3(1)<------MYB83<-----------RAV1(1)        <----- -------->AtMYB61          <---------ZAT14 <---------DEAR3(1)<---------ANAC46       ================= -------->MYB46(3)         --------->ZAT14------>NtERF2<---------TOE1(2)<-------GAMYB          ------ -----WRKY12 ----------->GT1          <---------DEAR3(1)<---------MYB46(3)<---------MYB46(3) <------- -----ETT(2) --------->LBD16  <-----------HVH21------>NtERF2<---------LBD16         ----------->RAV1(2)   caccaatcaagccaccggtgaaaacttactacagtcatggccgacgcggctccgacgtaggttgcggtatctgtggttgtttctccagctgtctcctttg  14913000  Previous    Next  AGI:  At2g35450.1    Description:  hydrolase. similar to unknown [Populus trichocarpa] (GB:ABK95586.1); contains InterPro domain Amidohydrolase 2; (InterPro:IPR006992) Range:  from: 14910124    to: 14912451    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g35460.1    Description:  harpin-induced family protein / HIN1 family protein / harpin-responsive family protein. similar to NHL3 (NDR1/HIN1-like 3) [Arabidopsis thaliana] (TAIR:AT5G06320.1); similar to hin1 like protein [Capsicum chinense] (GB:BAD11071.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) Range:  from: 14912867    to: 14913583    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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