Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------ANAC58      <---------ANAC58   ------->MYC3   <-------MYC3   <-------MYC2   ------->MYC4   ------->MYC2 ------->MYC3 <-------MYC2                                                                              --------->AtLEC2 ------->MYC2                                                                           <---------ICU4 <-------MYC3               --------->ANAC46                                         --------->YAB1 <-------MYC4            <---------REM1(2)           --------->ZAT6                 <---------YAB1 --->AGL15        ---------->DOF2      >>>>>>>>>>>>>>>>>LFY                       --------->YAB1 ----AGL15   --------->AHL20(1)       --------->RAP2.3(3)                        <---------YAB1 ---->AGL3   --------->ARR11(3)     --------->At4g35610                        ----------->GT1 ---->AGL2   <---------ARR11(3)     <---------At4g35610  -------->P        --------->ARR11(3)    ----   gcacatgtgcttgaatatatcaaagtcttcacaccatgagcagccattgtctctaaaactaccaatgtgttcgatgtgatattgtgataatacttgcaaa  14712900                         --------->WOX13(1)                      --------->TOE2(3)                                   ===========================                   <-----------GT1                                        --------->TGA1a               --------->AHL20(2)                                         <---------TGA1a              <---------AHL20(2)               <---------ICU4             <---------O2           <---------AHL20(1)                 <---------ATHB12            --------->O2    <---------ZAT18           <---------ARR11(3)          ----------->GT1            --------->YAB1   <---------ARR14(2)           --------->AHL20(2)         <---------TOE2(3)    <----------ID1 ===========================           --------->AHL20(1)       ================================================bZIP_DOF  <------ ------->HVH21<---------YAB1        ---------->DOF2      <---------------AtSPL8   <------ZmHOX2a(1)   tgacagaacacaaaatattatttacatcaatcttacagcaaaggttaaatcattttgagaaggaacaaaaatactcacttgagaggaaactgtgtgcttt  14713000                 --------->At4g35610                ----------->RAV1(1)              --------->At4g35610                                     ---------->DOF2              <---------At4g35610                                  --------->TOE1(3)            --------->MYB46(3)                          --------->AHL20(1)          ----------->RAV1(1)                           <---------AHL20(1)       --------->ANAC58                                 --------->ARR11(3)       --------->ANAC58                               --------->AHL20(1)                 XXXXXXXXXXXX       --------->ANAC46                               <---------ARR11(3)       <---------ANAC58 ----- ----------->RAV1(1)    <-------TEIL      <---------ANAC58         --------->TOE2(3)  --------->ANAC58 ====================MYC_MYB              <---------ANAC58        ----------->RAV1(2) --------->ANAC58 ====bZIP_DOF------->GAMYB<-----------HVH21           <---------AHL20(1)       <---------ANAC58 ----- ----DOF2 --------->MYB52(1)      <-----------HVH21   --------->ARR11(3)  <---------GLK1(2)     -----   ctccaacataagcaacagcagcaaaatgcatcacagcgtcaaatgcgttttcagaaaatattttgttaacctgaaagaatttcttatcaagaaaacacac  14713100                                                                                <------ZmHOX2a(2)                                                                       <---------At4g35610      <---------ANAC58                                                 --------->At4g35610      <---------ANAC58                                 <------ZmHOX2a(2)       --------->ARR14(2)  ---------->DOF2                                     <---------ARR11(3)       --------->ARR11(3) XXXXXXXX>MIR835-3P                 >>>>>>>>>RAP2.2   --------->ARR11(3)       <---------ARR11(3) ---->ANAC58                     <---------CCA1(2)   ==================================HOX2a_HOX2a ---->ANAC58             <---------AtMYB61           <------ZmHOX2a(1)------->TEIL --------->At4g35610 ---->ANAC46          <-----------RAV1(1)  --------->YAB1            <---------AtLEC2   acaaaaaagcttgtctgtgtgtttatggtggtcttatatctaaaatcacaatgaaggatcatacagcatttgcatctccaagatcagcataaatgaattg  14713200                                            --------->DEAR3(1)                                        --------->ZAT14                                        <---------ABI4(2)                                        <---------ZAT14                                     --------->RAP2.6(3)               --------->ARR14(2)   <---------WRKY18(1)               <---------ARR14(2)------>ZmHOX2a(2)             --------->LBD16    <------ZmHOX2a(2)            <---------ANAC55(2)<---------ARR14(2)            <---------ANAC46   --------->ARR14(3)            <---------HSFB2a(2)--------->ARR14(2)            --------->HSFB2a(2)--------->AGP1           <---------LBD16     <---------AGP1                           ----------------->AGL1         <---------ARR14(2)    <-----------ARR10               <---------GLK1(2)         --------->ARR14(2)    <---------ARR11(3)              <------------CBF                 <----      <---------TOE1(2)        --------->ARR11(3)--------->ARR14(2)   ------>ZmHOX2a(1)   <----------      --------->LBD16          <---------ARR14(3)<---------ARR14(2) <---------ANAC58   <---------ARR11(3) <----------DOF2      <---------MYB46(3)--------->ZAT18       *TSS  <---------ANAC58   --------->ARR11(3)   aagctttccaggttccggaaacagttgttgcaagatcttgactgcaccgaggttccctcgagatagattgtcctgccaaaacatgaaaagatttacttct  14713300                                                                                                    <                                                                                                 <---                                                                      --------->ANAC58         ------                                                                      --------->ANAC58        -------                                                                      --------->ANAC46     <---------ANAC46                                                                      --------->ANAC55(1)  <---------ANAC58                                                                 ----------->HVH21  <---------HSFB2a(2)       <-------TEIL         --------------->AGL15         ------------>CBF          --------->HSFB2a(2) ------DOF2  --------->ANAC46       ------------>CBF     <<<<<<<<<<<<<<<<<LFY    <----------DOF2 ---- -GT1 --------->CCA1(2)  ------->TEIL            ------->TEIL  --------->YAB1 ------->TEIL <---------ANAC58   ttacttagatacaacacgagaagcatgaatctatgtaaggcaatggagatgtatgtataccacaatggtgacacggtatgaatcttttagaaggcgtaaa  14713400                          ----------->RAV1(1)                         --------->AtMYB61                         <---------ALFIN1                         --------->DEAR3(1)                     --------->ZAT14     ----------->HVH21  --------->MYB46(3)    <-------MYC3     <---------ZAT14                            --------->HSFC1(1)    ------->MYC3   --------->ANAC46                             <---------HSFB2a(2) -------TEIL   <-----------GT1                                  --------->HSFB2a(2) ------At4g35610  ----------->RAV1(2)                ------>ZmHOX2a(1) --->DAG2   --------->ARR14(2)             ------->MYC3         <---------HSFC1(1) --->DOF2   <---------ARR14(2)        <<<<<<<ZML2  ----------->RAV1(2)                  <---------ICU4 ----->At4g35610  ====================RAV  <-------MYC3  <---------ZAT18  ---------->DOF2   gctgcatgtgacccgatataccctgcaccaccagtgactagaacatgtgtaactcctggttcacttcgagaaaactgaaagatgaagaaaacattactac  14713500                                                                                  <---------ANAC58                                                                                 <---------MYB46(3)                                                                                 <------MYB83                                                                                 <------MYB46(1)                                                                                <---------AtMYB61                                                                              <---------ARR14(2)                                                                           <---------ANAC46                                                                          <------MYB46(1)                                                                          <------MYB83                                            ----------->GT1              --------->ALFIN1                                  <-------TEIL                       <---------TOE2(3)                              --------------->AtSPL8                 <---------TOE1(3)                              --------->MYB59         --------->ANAC58  <--------P<---------ANAC58                              <---------------AtSPL8  --------->ANAC58  --------->ALFIN1           --   tacaaaaatgagacactgtatcaatatcaagttaagtacatataagaagtaataccacgcttggggtattgaaggttggggattggttgagcaagagaat  14713600                                                                                            ---------                                                                                         --------->YAB1                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                                  --------->ANAC46                                                       <----------DOF2          <---------ALFIN1      <----------DOF2                      --------->ICU4                      --------->ZAT14 ----->TEIL  <-----------HVH21          <---------AHL20(2)                    ------>ZmHOX2a(1)   gcacattgctgtaagtgtcatgaccaaaacaatcttccccatgtaattgttgttcttctttgggtctgcaaaatccaatcctacactccaaaaatcatca  14713700                                                                        --------->LBD16                                                                       --------->HSFB2a(2)                                                                       <---------HSFB2a(2)                                                                     ----------->RAV1(1)            <                                                                    --------->RAP2.3(3)             <                                                         --------->MYB52(1)  --------->GLK1(2)      <                                                <----------DOF2  --------->ANAC58                   -                                            <---------YAB1       --------->ANAC58   <---------ARR11(3) <-------MYC3                       ---------->DOF2    <---------MYB59<------NtERF2 --------->ARR11(3) ------->MYC3                    --------->ANAC58     <---------At4g35610    <---------ARR11(3)   --- >YAB1                           --------->ANAC58     --------->At4g35610    --------->ARR11(3)  <---   acatgtgtgaaattttgaatccaaataagaaacacaagaaaagcttatgactttggagctaactaataagcccccagaaaatctaaaatctctatcaact  14713800  Previous    Next  AGI:  At2g34850.1    Description:  MEE25 (maternal effect embryo arrest 25); catalytic. Identical to Putative UDP-arabinose 4-epimerase 2 [Arabidopsis Thaliana] (GB:O64749;GB:Q8VYK0); similar to HSR8/MUR4/UXE1 (MURUS 4), catalytic [Arabidopsis thaliana] (TAIR:AT1G30620.2); similar to HSR8/MUR4/UXE1 (MURUS 4), UDP-arabinose 4-epimerase/ catalytic [Arabidopsis thaliana] (TAIR:AT1G30620.1); similar to HSR8/MUR4/UXE1 (MURUS 4) [Arabidopsis thaliana] (TAIR:AT1G30620.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO42610.1); contains InterPro domain UDP-glucose 4-epimerase; (InterPro:IPR005886); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:I Range:  from: 14711711    to: 14713262    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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