Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    ------>ZmHOX2a(2)                                                  =============================HOX2a_HOX2a                                                 ==============================HOX2a_HOX2a                                                 <---------GLK1(1)                                                 --------->GLK1(1)                                                 <------ZmHOX2a(2)                                                <---------ARR14(2)                                                --------->ARR11(3)              <---------AtMYB61                                                <---------AGP1                <---------MYB52(1)                    <------MYB83                <---------ARR11(3)         <---------DEAR3(1)                    <---------HSFB2a(1)         <-----------ARR10          ------>ZmHOX2a(2)      ----------->GT1   --------->MYB59         --------->ARR14(2)       --------->ARR14(2)         < ----->ANAC58       <------MYB46(1)            <---------CCA1(2)         <---------ARR14(2)       --- ----->ANAC58 <---------LBD16               <---------LBD16              --------->GLK1(2)        <-- ---->HVH21<---------ARR11(3)         ---------->ID1                    <------ZmHOX2a(1)         --- -->ANAC46 --------->GLK1(2)--------------------->WRI1                <---------TOE2(3)           <-- ->SPL7    --------->ARR11(3)        <-----------GT1            <---------GLK1(1)          ----------   cgcatgaggcgaaaatctcggaaggttaggccttgtttttttcgtcttcggatctctgcgtaagcgaaatctgaggatcggtgaggtttgagagaaagga  14598500                                <------NtERF2                               <-----------HVH21                              <------NtERF2                            --------->DEAR3(1)                            <---------ANAC58                            <---------ANAC58                            <---------ANAC46                           <------NtERF2                           --------->ATERF1(1)                          <---------RAP2.6(1)                          ------>NtERF2                          <---------RRTF1(1)                          <---------ATERF1(1)                          <---------DEAR4(2)                          <---------ORA47(2)                          <---------DEAR3(2)                          <---------RAP2.3(1)                         <---------RAP2.3(2)                         <---------RRTF1(3)                         --------->DEAR3(1)                         <---------DEAR3(1)                         <---------RRTF1(2)                        --------->ATERF1(1)                        <------NtERF2                        <---------ABI4(1)                       <---------ERF1                       <---------RRTF1(1)                       <---------RAP2.3(1)                       <---------ATERF1(1)                      <---------DEAR3(1)                      --------->ATERF1(2)                      <---------ATERF1(2)                      <---------RAP2.3(2)                      <---------RAP2.3(3)                      <---------RRTF1(3)                      <---------RRTF1(2)           --------->LBD16<---------ERF1          --------->HSFB2a(2)------>NtERF2          <---------HSFB2a(2)--------->ABI4(2)          <---------LBD16<---------RAP2.3(3)         <---------LBD16<---------------------WRI1                                         --------->MYB52(2)     <<<<<<<<<TBF1    <---------RAP2.6(2)                                     <----------DOF2 ----------DOF2     <---------DOF5.7(2)                --------->At4g35610   <---------ANAC58 ------>HSFB2a(1)   --------->MYB52(1)          ----------->HVH21            <---------ANAC58 -------HSFB2a(1)  ----------->HVH21          --------->At4g35610        --------->At4g35610 ------>HSFC1(2)   --------->WRKY12           ----------->RAV1(2)        --------->LBD16   <---------MYB46(3) -------HSFC1(2)--------->MYB52(2)          ------->GAMYB                <---------At4g35610<-------GAMYB >DOF2  <---------LBD16------>NtERF2  --------->YAB1   <---------At4g35610  <---------At4g35610     -   agctttcttcttcggggatagttgacggcggcgcgtcgaatgataaccggctgaaactgctgcaactctctgttccgctgcttatcggtgagtttgttgt  14598600                         --------->ANAC55(2)                         --------->ANAC46                                                         ---              --------->DEAR3(1)      <------NtERF2                                              ----            <---------At5g28300      --------->LBD16                                     --------->AHL20(2)          ----------->HVH21         --------->LBD16                      <------ZmHOX2a(1)      <----        --------->At4g35610         <---------LBD16       --------->ANAC58               --------->AHL20(1)        <---------At4g35610        <---------LBD16        --------->ANAC58               <---------AHL20(2) ----->ZmHOX2a(1)   <---------GLK1(2)------>NtERF2     <---------ATHB12 ----------->GT1 --------->AHL20(2)   tcctaaactcatctcaccgtctgattctcgtaacatcgccgggaaaatcgaagttaaatcaagaaatggctaagaggataattcaagaaaaaaaattgga  14598700                                                                                                  <--                                                                                    --------->CCA1(2)                                                                                   --------->ARR11(3)                                                                                   <---------ARR11(3)                                                                            --------->CCA1(2)   ----- ------>At4g35610                                <---------AtLEC2    ------>ZmHOX2a(2)         <----- ----->GLK1(2)   ----------->HVH21           <----------DOF2        --------->At4g35610 <---------TOE2(3) -----GLK1(2)  <---------ICU4     <------ZmHOX2a(1)                 <---------At4g35610 <---------TOE1(3)   atctgaaaacagaagactaatgacagagatgaaacaggacagggtgtctttgaatggacattagtttctgatctgaagagatgaagatttagggtttatg  14598800               <---------GLK1(2)               <---------ARR14(3)               <---------ARR14(2)               --------->ARR14(3)               --------->ARR14(2)               <---------ARR11(3)                                                               -----               --------->ARR11(3)                                                        <------MYB46(1)      >>>>>>>>>TBF1 <---------HSFB2a(2)                                                  <------MYB83 -------WOX13(1)    --------->HSFB2a(2)             --------->ALFIN1                    <---------MYB46(3) ---->ATHB12 ----------->ARR10                <------ZmHOX2a(1)    *TSS                <--------P ----YAB1>>>>>>>>>TBF1             --------->CCA1(2)<-----------RAV1(1)    ----------->HVH21  <------   attgagaagaagaagaagattttcagaagtttgagagagatggaagaaggagaagtgttggagttttagagagaggcgagacagagagagttggtgaggg  14598900                                                                                            <--------                                                                                        --------->ZAT18                                                                                        <---------ZAT18                     --------->ZAT6                                                     <---------ZAT14                  <---------YAB1                                           --------->ANAC55(2)             ----------->GT1                                               <---------ANAC55(2)         --------->REM1(2)                                                 <---------YAB1   <--------      <---------ANAC58     ---------->DOF2                         <-------GAMYB     <---------ANAC58      <---------ANAC58 --------->At5g28300                        ----------->GT1    <---------ANAC58      <---------ANAC46----------->GT1                          <-----------RAV1(1)<---------WOX13(1) ------>GT1 <---------TOE1(3)                           <-----------GT1 --------->ICU4<---------WOX13(1) ---ANAC46  <---------TOE2(3)                   <---------AHL20(2)<---------MYB46(3)--------->ATHB12   gtatttatgcgtgtaaggttataacagtaaaaagacgttacagagaccattttttttttttcttactgtggttaattatgtaagattgattgcacttttc  14599000                                                                                             --------                                                                                      ------->PIF4                                                                                      <-------MYC3                                                                                      <-------MYC2                                                                                      ------->MYC3                                                                                      ------->MYC2                                                                      --------->ALFIN1<-------PIF5                                                                     ------->MYC3     ------->MYC4                                                                     <-------MYC4     <-------MYC4                                                                     ------->MYC4     ------->PIF5                                                                     ------->MYC2    <---------bZIP60(2)                                                                    --------->ANAC55(2)    ----------                                                                    <---------ANAC46 <---------TGA1a                                                                    <---------ANAC55(2)  ------------                                                               ----------->HVH21     --------->TGA1a                                                          --------->ARR11(3)         <---------O2<---                                                          <---------ARR11(3)         <---------ANAC58                                                    --------->bZIP60(1)              ================                                                    <---------bZIP60(1)              ================                                                    --------->TGA2(1)<-------MYC2    <---------ANAC58                                                    <---------TGA2(1)<-------MYC3    --------->ANAC55(2)                                                    <---------ANAC58--------->TGA1a  <---------ANAC55(2)                                                    --------->ANAC55(2)              --------->O2----   ----------->HVH21                                <---------ANAC55(2)<-----------HVH21------->TEIL  <-----------HVH21                               <---------TGA2(2) <--------ABF1    <---------ANAC46 >>>>>>>>CAMTA3                      --------->DAG2 <---------ANAC58--------->O2    ------------>OsbHLH66 <---------ANAC58             ----------->GT1    ----------->TGA1   <---------O2 <-----------------PIF3(1) <---------ANAC58    --------->DAG2 ---------->DOF2----------->STF1 ================================= <---------ANAC55(2) ------------------------>ANAC81<---------ANAC46<---------TGA1a<-------------DYT1 -DAG2              ---------->DOF2 ==========================================bZIP_DOF<-------PIF4 --DOF2   ----------->GT1 ---------->DOF2 <------ZmHOX2a(1)--------->CCA1(2)     <-----------HVH21   aacgcgtgagagaggtaaacagaaaagtgaaagagagaaaaagaggacttgatgacgtaagatatatgacacgtgtgagacgttgtcacgtgcctgaaag  14599100       <---------HSFC1(2)       --------->HSFC1(2) -->DOF2<---------ANAC58       <-----------GT1 ->HVH21<---------ANAC58   <---------YAB1                                                     ------- ----->AGL1               <---------AHL20(1)                                           <---------YAB1 ------REM1(1)           --------->ATHB51                                     --------->CCA1(2) ===bZIP_DOF             --------->AHL20(2)                                  --------->ARR11(3) ===bZIP_DOF      <-----------GT1                                            --------->ARR14(2) ----->ALFIN1     ---------->ID1             ------>ZmHOX2a(1)               --------->ARR11(1) ===bZIP_DOF  <----------DOF2<---------AHL20(2)        <---------YAB1        <---------ARR14(2)   ---   tgtagcagtagcttctctttttccccattattttttcttcttatttcctctaggcatattataggggtgcaaaattacagatatggattacaatttcgag  14599200                                                          <---------YAB1        <----------DOF2                                   --------->ICU4        <---------------AGL15                       --------->DAG2       <-----------------AGL3           <---------At4g35610                      <------ZmHOX2a(1) -->HSFB2a(2)                           --------->At4g35610                     ----------->GT1 ------>GLK1(2)                      <-------TEIL  ---------->DOF2      --------->GLK1(1)   actcttgtgtctttttttggagaaatattggactagtgattcatctgtgttaaaaaagtgatgactaaatacagatttcatgaggaaaattttgaagatt  14599300                                    --------->AHL20(2)                        ---------->ID1             <---------YAB1       --------->TOE2(3)                          <-------GAMYB       <---------TOE2(2)         <---------ICU4       <---------HSFB2a(2)   <---------MYB46(3)      - --------->ANAC46           --------->TOE2(3)         --------->HSFB2a(2)   --------->MYB52(2)     <-   aatactccataggttatgaatactaactaatctcaacattatatatggattagtttctgaaacttaaacagttttagtttgttgtttctggctaattcaa  14599400  Previous    Next  AGI:  At2g34650.1    Description:  PID (PINOID); kinase. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G47750.1); similar to putative serine/threonine protein kinase [Brassica rapa] (GB:AAB54117.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 14596839    to: 14598867    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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