Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->ARR14(2)                      <---------ARR14(2)                                                  --------->ANAC58                  --------->At5g28300                                       --------->AHL20(2) ------                 ----------->GT1                                       --------->LBD16    --------->ANAC58           --------->ANAC58                                       <---------GLK1(1) ----------->RAV1(1)           --------->ANAC58                                       --------->GLK1(1) ------->GAMYB           --------->ANAC46                                 <-----------HVH21      --------->MYB46(3)          ------->GAMYB   ------>ZmHOX2a(1)    <---------ZAT14<-----------RAV1(2)<-----------GT1    -   aactaagtacaacaggccatggtgaatcctctgttcttggaacagagagaacagagagaatgggtcaggtttccgaaatcaaataaccacagaagcaaaa  14553600                                                                                            ---------                                                                                           --------->SPL7               --------->ANAC58                                                          <---------SPL7               --------->ANAC58           --------->LBD16                               <---------ANAC58       <----------DOF2                  --------->ANAC46                                <---------ANAC58      <---------ANAC58          --------->At4g35610      --------->ANAC58              --------------      <---------ANAC58         <xxxxxxxxxxxxxxxsmallRNA(se3)                      --------->ZAT14    <---------YAB1             <xxxxxxxxxxxxxxxsmallRNA(fl3)            --------->GLK1(2)--------->ZAT14  --------->YAB1               <xxxxxxxxxxxxxxxsmallRNA(le3)---------->DOF2       <---------ZAT14 ---->DOF2   <---------WRKY12  <xxxxxxxxxxxxxxxxsmallRNA(fl3)--------->DAG2       --------->ZAT18  -- -------->GLK1(2)       --------->ZAT6--------->ANAC46   --------->ANAC58  <---------YAB1<---------ZAT14   agaatcatgctttcgtcaacccattaacactatgagctataccccccaaaaacaaaaccaagaaaagtgatgagattatgttagtgaacagcgtaccgtc  14553700                                  --------->ATERF1(1)                                  <------NtERF2                                 ------>NtERF2                                 <---------RAP2.3(1)                                 --------->RAP2.6(2)                                <---------ATERF1(2)                                --------->DEAR3(1)                                <---------DEAR3(1)                                <---------ANAC46                               ------>NtERF2                               <------NtERF2                               --------->ATERF1(1)                               <---------At4g35610                               <---------DREB2C(1)                              <---------RAP2.3(1)                              <---------RRTF1(1)                              <---------ATERF1(1)                              ------>NtERF2                              <---------RAP2.6(1)                             <---------RAP2.3(2)                             <---------RRTF1(2)                             <---------DEAR3(1)                            --------->At4g35610                            <---------At4g35610                            <---------LBD16                           <-----------RAV1(1)                          <---------DEAR3(1)                         --------->ATERF1(1)                      <------NtERF2                      --------->ATERF1(1)                    <---------DEAR3(1)                    <---------ANAC46                   <------NtERF2--------->ATERF1(2)                   <---------LBD16------>NtERF2                   --------->ATERF1(1)                  ------>NtERF2--------->DREB2C(1)                  <---------ATERF1(1)                  --------->LBD16<---------ATERF1(1)                  <---------ERF1<---------RAP2.6(2)                  <---------ORA47(2)                  <---------RAP2.3(1)                 <---------RAP2.3(3)                 <---------DREB2C(2)                 <---------RRTF1(2)                 <---------RAP2.3(2)                 --------->ATERF1(2)                 <---------ATERF1(2) >DEAR3(2)       <---------DEAR3(1) --------->RAP2.6(2)                        ------>ZmHOX2a(2)  --- ->AtSPL8        <---------RAP2.6(2)----------->RAV1(1)         <---------AHL20(2)       <-----------RAV1(1) --------->HVH21<---------LBD16--------->At4g35610              --------->AHL20(2)      <---------YAB1   ttcgaccggtgaagttttgccggcggagtctgcggcggccacaatggagagaccaagtagaagtattaaaatggaattcgatctccaactattgttgctg  14553800                                                         <---------LBD16                                                         <---------ANAC58          <---------ZAT14                                                         <---------ANAC46          --------->ZAT14                                                         <---------ANAC58 --------->TOE1(2)                                                     <----------DOF2     <---------ZAT2                                            <---------ZAT14              --------->At4g35610                                            --------->ZAT14              <---------At4g35610------>ZmHOX2a(1)                        <---------ZAT14 --------->ARR14(2)               --------->ZAT2     <--------                        --------->ZAT14 <---------ARR14(2)<---------HSFB2a(2)      --------->ZAT18       --------->At4g35610       ---------->DOF2 <---------ZAT14      ---------->DOF2   <---------ZAT18 ------->DOF2  <----------DOF2  <------ZmHOX2a(1)--------->ZAT14--------->ALFIN1  --------->ALFIN1   taaagcatcatctctctctttctctgtgaacagaggaaagtgtttctgcagtgttcttttcgggcagtgagggaaagctgggaagtgtagtgtcctttta  14553900                                                                                              -------                                                                                             --------                   <----------DOF2                                                         <---------GLK1(1)            <---------At4g35610                                                            --------->GLK1(1)            <---------ZAT2                                                                 --------->CCA1(2)            --------->At4g35610                                                           --------->ARR14(2)            --------->ZAT2                                                       --------->GLK1(2)          <-----------RAV1(2)                                                   <---------ARR11(3)   <---------ARR14(2)                               <---------DAG2              --------->ARR11(3)   <---------ARR11(3)                          --------->YAB1                 <---------TOE2(3)<<<<<<   --------->ARR14(2)              <---------AHL20(2)     *TSS    --------->AHL20(2)     <------ZmHOX2a(1) --DOF2------>ZmHOX2a(1)           <-----------GT1  <----------DOF2       <------------CBF<---------ARR14(2)   aacaaaatcctcccagctgttctttttgttccactatttacattcggaataatactttatcgaactaaataaaaaccattgagattttgtaggatatgtt  14554000                    <-----------------AGL2                    ----------------->AGL1                    ----------------->AGL3                    <-----------------AGL3              <---------MYB46(3)                   <-----------------AGL1              <---------AtMYB61                  ------->TEIL--------->PCF2        --------->ALFIN1                        <-------- ---->GT1         --------->ARR14(2)               ------->MYC3                     <---------MYB46(3) --->GT1          <---------ARR14(2)               <-------MYC3  --------->ATHB12  <---------AtMYB61 <<<MYB98        <---------CCA1(2)                <---------ANAC46           --------->ANAC46 <------   aaaaaataggtagagaagtgtatccattttgggaccctcttcatcacaaaccgcgtggtggtcgtagtcattggtctctacggcagtggtttactaggtt  14554100                                        <----------DOF2                                   <---------DAG2                               --------->MYB46(3)                             --------->YAB1      <----------DOF2                      <----------DOF2 -TOE1(2)                   <---------ATHB12 <----------DOF2                        --------------->AGL15 ---GLK1(2)  <-----------------AGL1<----------DOF2   <---------AHL20(2)          <-----------GT1   ctctcttactcatttatctaatatggaccaataaccacttttcttttctttctttttatttgtaagaaatagccaacttgtttttactctttatatcagt  14554200                  --------->ANAC46                 <---------------------WRI1             --------->REM1(2)             --------->ZAT14             <---------ZAT14            --------->ALFIN1                                        <------ZmHOX2a(1)            <---------ANAC46                                   <------ZmHOX2a(2)          <---------ANAC46                                    --------->ARR11(3)      <---------ARR11(3)        <---------At4g35610                           <----------DOF2                 --------->ARR11(3)        --------->At4g35610                        <---------ARR11(3)        <---------ARR11(3)       <---------AGP1          --------->ALFIN1    --------->ARR11(3)        --------->ARR11(3)     ----------->ARR10  <----------ID1             <---------AHL20(1)  ---------->DOF2<---------GLK1(2)    --------->ALFIN1 ---------->DOF2      <---------MYB46(3)  <---------ARR14(2)<----------DOF2  ----   ccaagggtagagctgtgtagacgaaaagaacaagtggggagggattgttgcaatatcttttggagatcgaggaaaaagacatcttttagatttttgaaga  14554300                                                                 <---------GLK1(2)                                                             --------->YAB1                                                            <---------ATHB12                       --                                                           --------->ANAC58                        <-                        --------->ANAC58                   --------->ANAC58                      ----     <------MYB46(1)    --------->ANAC46                  --------->WOX13(1)                  -------     <------MYB83       --------->ANAC58               --------->ANAC58               ---------->DOF2 ----->CCA1(2) <-------TEIL        ----------->GT1     --------->ANAC58     ----------->GT1   -------   aatgggctggttttagattcagagacactcaatggcaatgtgaataagtgtttcaagaagcaatcaagaatttcaacaatgtgaaaaacaaagcacaagt  14554400                                                 --------->ATHB51                       --------->TOE2(3)                                        <---------MYB46(3)                              --------->TOE1(3)                                        <-----------RAV1(1)                             ------->GAMYB                                       <---------WOX13(1)                           <---------WRKY12                                       <---------YAB1                              --------->WRKY18(1)                                      >>>>>>>>>ARR1                                <------NtERF2                                      >>>>>>>>>ARR2                               <-----------HVH21                                     --------->ATHB12                             <---------RAP2.6(3) ------->TOE2(3)                    <---------YAB1         <---------AtLEC2      --------->RAP2.6(2) --------MYB59                   --------->ICU4  <---------ICU4             ---------->DOF2 --->TEIL<---------YAB1        --------->YAB1   <---------MYB52(1)         <---------WRKY38(1) -->ANAC58                     <---------ICU4   --------->ICU4             <---------WRKY45 -->ANAC58          <---------YAB1  --------->ICU4     <----------DOF2     <---------WRKY12         <   acctaagtgctactattgtattatgttacacaaacattatgattgttgccattatttctttgcataaatgttttcagtcaaagccgtcaaccctaacatg  14554500  Previous    Next  AGI:  At2g34510.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29980.1); similar to unknown [Populus trichocarpa] (GB:ABK95079.1); contains InterPro domain Protein of unknown function DUF642 (InterPro:IPR006946); contains InterPro domain Galactose-binding like (InterPro:IPR008979) Range:  from: 14551076    to: 14553958    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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