Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                 ----                                                                     =============================HOX2a_HOX2a                                                                     <------ZmHOX2a(2)           ----                                                      <---------AHL20(2)                         ----                                                      --------->AHL20(2)                         <---                                                     <---------AHL20(1)                         -----                                                     --------->AHL20(2)                         -----        ---------->DOF2                              <---------AHL20(2)                         <----   <------MYB46(1)        <------ZmHOX2a(1)    --------->TOE2(3)     ================================HOX2a_HOX2a   ----------->GT1    --------->TOE1(2)    <----------DOF2          <---------ARR11(3)        <------ZmHOX2a(1)   <------MYB83--------->At4g35610     --------->ARR11(3)           --------->ARR11(3)      <--------  --------->MYB59 ---------->DOF2      <---------ARR11(3)       ---------->DOF2            <------ZmHOX2a(1)   gaagttggtaaaaagacagcaaaagctaggaaattggagaagacccttttcttaatttaattcaacaaaagatcaaacaaacaaattggagaaggaggaa  14289700          --------->At4g35610  --------->TOE2(3)  --------->TOE1(3) ------>TEIL ----->HSFB2a(1) ----->ANAC58  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               --------->TOE2(3) ----->ANAC58<------NtERF2                              --------->AHL20(2)                    <------ZmHOX2a(1) ------HSFB2a(1)                                        <---------AHL20(2)                   -------- ---------->AtSPL3            --------->TOE1(2)         <---------YAB1                --------->HSFB2a(2) ---------->AtSPL8         --------->MYB52(1)        <---------DAG2xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -----------AtSPL3 <----------DOF2         ---------->DOF2 <---------YAB1             <---------HSFB2a(2) -------AtSPL8<-----------RAV1(2) <------ZmHOX2a(1)  <----------DOF2                ------>ZmHOX2a(1)   cgtaccttaagaagcggcaggctttatacaaacgaaggagaaccaaaaaacacccctttttattaatctcaatttctcgcctattcctctagagaaggag  14289800                                                                       ------->TEIL                                                                     ------->GAMYB                                                                    <---------MYB52(2)                                                                    --------->MYB46(3)                                                                   <---------TOE2(3)                                                            ------>NtERF2                                                           --------->ANAC58                                                           --------->ANAC46                                                           --------->ANAC58                        <-                                                           <---------TGA2(1)                       --                                                           --------->TGA2(1)                    -----                                                           <---------bZIP60(1)                ------>MYB46(1)                    <-------TEIL                        ----------->HVH21        --------->ATHB12 <--             --------->LBD16                     --------->LBD16  <---------DOF5.7(2)        --------            <---------HSFB2a(2)        <---------MYB52(1)  --------->bZIP60(1)--------->ANAC46------>MYB83            --------->HSFB2a(2)       --------->TOE2(3) ----------->TGA1--------->MYB46(3)   --------        --------->GLK1(1)<---------ZAT14        --------->LBD16   --------->MYB52(1)        --------- --->GT1<---------GLK1(1)--------->ZAT14      <---------LBD16   --------->DOF5.7(2)        --------->MYB46(3)   aaatagtgagaaatccagaagatgcagagtacttgttctcccttaatctcccgagtctatgacgccattaacgaacctccaaaccattgcaaaaccaaca  14289900                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                <----                                                                                                <----                                                                                              <------                                                                                             <-------GAMYB                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                 --------->At4g35610     <---------MYB46(3)                                                           <---------MYB52(1)           --------->ALFIN1 --------GLK1(1)                                          <-------GAMYB                 <---------AtMYB61 ------->GLK1(1)                                      <---------MYB52(1)                <---------DEAR3(1) -->GAMYB                                       --------->ZAT14  <---------At4g35610 <---------AtMYB61 -------GLK1(2)         ------>ZmHOX2a(1)       <---------ZAT14  <---------ZAT14  <---------HSFB2a(2) --->RAV1(1)  <---------ANAC58          <---------ANAC58 <---------ANAC58         --------->HSFB2a(2) ->MYB52(1)   <---------ANAC58          <---------ANAC58 <---------ANAC46        <---------LBD16<---- >AtMYB61  <---------MYB52(1)        <---------MYB52(1)  <---------ANAC58  <----------DOF2 <---------AtMYB61   gaattccctctctgtttcgttctctccttctctctctctgtttcgttctctgctctgtttcgttgtctgctctgtttctttgctctggaggtggtggttg  14290000                     <---------ANAC55(2)                     --------->ANAC55(2)  <---------ANAC46   <------MYB83                                                                 <-- ------MYB46(1)      <------MYB46(1)                                                              <-- ------MYB83        --------->MYB59                                    --------->ALFIN1      ------>MYB46(1) --------AtMYB61    --------->MYB111(1)                        <---------ARR11(3)            ------>MYB83 -----MYB46(3)  --------->ATHB12                               --------->ARR11(3)           --------- --MYB83      <---------WOX13(1)                               --------->AHL20(1)      --------->KAN4(2) --P          <--------P                                      --------->CCA1(2)       <----------TaMYB80 -MYB46(3)  ----------->GT1                                  <---------ARR11(3)       <---------KAN4(1) >MYB111(2) <---------MYB46(3)                           ---------->DOF2              --------->KAN4(1) >MYB55(2) --------->ALFIN1                        ---------->DOF2   <---------ANAC46<---------KAN4(2) --MYB46(1)<---------AtMYB61                ---------->DOF2  --------->ARR11(3)      ---------->TaMYB80   gatggtgttgagagtggttgattaggtatcacatcgaaggaagggggaaagggcaaagacaaagatatattcggtggagaagaagagaatataccaacag  14290100                                                                                          ------>MYB46(1)                                                                                        <---------MYB59                                                                                      --------->ANAC58                                                                                 ------->GAMYB                                                                                --------->MYB46(3)                  --------->ANAC58                                             --------->ANAC46                  --------->ANAC58                                             ------>MYB83  --------          ----------->RAV1(1)                                                  -------->P ------>MYB83      --------->ARR14(2)                                <-----------GT1        ------>MYB46(1) <-----      <---------ARR14(2)                          <---------DAG2        <----------DOF2 ------->GAMYB ---------ARR10   --------->ANAC46   <----------DOF2  <-----------GT1   <---------DAG2--------->ANAC58 -------ARR11(3)*TSS        --------->ANAC46      <----------DOF2  <----------DOF2  --------->MYB46(3) -->RAV1(1) <---------ALFIN1--------->REM1(1) ------>ZmHOX2a(1)  ------>ZmHOX2a(1)--------->ANAC46 --   tatctcagtatcccacacacacacaactctacatcactccttttcttcctcccttttttctctcttcctctttccttttccaacccacaaccaaattata  14290200                  --------->GLK1(2)                <---------AHL20(2)     --------->ATHB51       <----------DOF2                 --------->ATHB12       <---------DAG2                  <---------ICU4             <---------MYB52(1)                <    <---------AHL20(2)                <---------YAB1         --------->ARR11(3)                  <---    <-----------GT1                   --------->ICU4         <---------ARR11(3)                  ---- ->AHL20(2) --------->AHL20(2)      --------->YAB1           --------->GLK1(2)                ------- ------GT1 <---------YAB1 <-----------GT1         --------->YAB1----------->GT1       ---------->DOF2 ------->ICU4<---------AHL20(2)   <-----------GT1 --------->AHL20(2)       ---------->DOF2   <-------   cattattaactttattatataatctgttatacattttttcattatttgtcaataaaaaacaaaaatctgttatatttcaaagaaaaaaaaaagaattaat  14290300                                                                   --------->bZIP60(1)                                                                   <---------bZIP60(1)                                                                 <---------ICU4                                                         --------->ZAT6                                        --------->HSFB2a(2)      --------->YAB1                                        <---------HSFB2a(2)     --------->ICU4         <-----------GT1 ---------AHL20(2)             <---------ICU4          <---------DOF5.7(2)           <---------YAB1 ------AHL20(1)                --------->ATHB12      <---------MYB52(1)            --------->YAB1 --- ----->AHL20(1)             --------->YAB1           --------->DOF5.7(2)          <---------YAB1 ---- -->AHL20(2)              --------->ZAT14           --------->TOE2(3)         ----------->GT1   <---- --AHL20(2)    --------->MYB52(1)--------->ICU4     --------->TOE1(3)    ---------->DOF2        <----   atataatctatagaacaaaacagaaaactatagtcattagttccaaaaaaaaaacgttaactctaaatgatgacacaaagcggtattataaacgatttaa  14290400                                                                  ------>ZmHOX2a(1)                                                                  <----------DOF2                                                               ---------->ID1                                                           ==================bZIP_DOF                                                           --------->ANAC55(2)                                                           <---------ANAC55(2)                                                           <---------TGA1a          --------------->AtSPL8                                                           <---------O2             <---------------AtSPL8                                                   --------->ARR14(2)             <---------TOE2(3) ------>TOE2(3)                                    --------->GLK1(2)  <---------TOE1(3) <-------TEIL ------->GT1    ----------->GT1                    <---------ARR14(2) <---------TOE2(3) ------->TEIL -----TOE2(3)   <---------ANAC46      ----------->GT1      --------->O2       --------->TOE2(3) -----TOE1(3) ----------->GT1      --------->CCA1(2)   <-----------HVH21<------ZmHOX2a(1)     <------   cgtaaatagctaaaaattgtgtaaaatagaagatgggatatagcaaaattgagaattcgtcacttgtcctttgaggataacattaagatgtacatttttc  14290500                                                         --------->ATHB51                                                        <---------YAB1                                                      <--------HAHB4                             <---                                                      <---------ICU4                           ------                                                     --------->ICU4                          --------                                                     <---------YAB1                          <-------                                                   --------->YAB1                           ---------             <---------WRKY38(1)                   <---------ICU4                        ---------->DOF2             <---------WRKY12                      <--------HAHB4                 <---------ANAC46   --------->ANAC58  <---------ARR14(2)           <---------ATHB12                <---------ANAC58   --------->ANAC46  --------->ARR14(2)           <---------YAB1                  <---------AtLEC2   --------->ANAC58  --------->GLK1(2)            --------->ICU4                  <---------ANAC58--- -----GT1    <---------WRKY45  --------->YAB1 --------->At4g35610               <---------YAB1<------ZmHOX2a(2)   tgttcaagacataagtcaacgagaatatggcaaacatatgtttccatgagctatcattattattgtttctctgtttcttattttgcttgaacaaagatca  14290600  Previous    Next  AGI:  At2g33770.1    Description:  ATUBC24/PHO2/UBC24 (PHOSPHATE 2); ubiquitin-protein ligase. similar to PFU2/UBC23 (UBIQUITIN-CONJUGATING ENZYME 23), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G16920.1); similar to hypothetical protein OsI_020215 [Oryza sativa (indica cultivar-group)] (GB:EAY98982.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70816.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT58719.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 14284634    to: 14290116    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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