Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                  ------->GAMYB                                                                 <----                 <------------AtMYB77                     --------->At4g35610                   -----                 --------->MYB46(3)                       <---------At4g35610                   -----          <----------ID1                                 --------->MYB52(2)                     <----        --------->DAG2                                 <---------MYB52(1)                      <-----       --------->DAG2                            ----------->HVH21                           --------      ---------->DOF2<-----------------AGL1  ------>ZmHOX2a(2) --------->HSFB2a(2)         ---------- --------DOF2   -------->P                 --------->ARR11(3)  <---------HSFB2a(2)         <---------At4g35610 ------ANAC58   <---------At5g28300    <----------DOF2 --------->DOF5.7(2)                 --------->At4g35610 ------ANAC58  --------->MYB52(1)  --------->AHL20(2) <-------GAMYB                      --------->REM1(1) ------ANAC46<---------MYB52(2) --------->WOX13(1)<---------WRKY18(1)           <---------STY1(2) ---   ctttggagaaaagggactaaccgtcttggtttggcaattaactttgatctcttgaccgttagcttccacaacttctccatctagccaggcttcatctgga  14103600         --------->ARR14(2)        <---------ALFIN1    --------->ANAC46         --------->TOE2(3)  <---------ALFIN1           --------->TOE1(3) -----ARR11(3)           <---------MYB52(1) -----ARR14(2)      <---------ALFIN1                     <---------ARR11(3)             --------->ANAC58 ---->ARR11(3)      ------------>AtMYB77                 <---------AHL20(1)             --------->ANAC58 ---->ARR14(2)      ----------->RAV1(1)                  --------->AHL20(1)    --------->AHL20(1) -----AGP1       --------->PCF2                          <---------AHL20(2)    <---------AHL20(1) ----CCA1(2)     <---------bZIP60(1)                     --------->AHL20(2)    --------->ARR11(3) <-- ->HSFB2a(2)  ----------->HVH21                 <---------TOE2(3)       --------->AHL20(2)   -------- ->RAV1(2)   <-----------HVH21                 ---------->DOF2         --------->AHL20(2)   <-------TEIL --->ZmHOX2a(2)  --------->bZIP60(1)--------->ZAT14      --------->ARR11(3) --------->AHL20(2)    ---   tcttccacccagacctgtgaccccacagttaccttcactgaagcctgattaaagtagaatatattagaaacaaataaaaaaaatattgtcaagcttcatt  14103700                                                                                      <---------TOE1(3)                                                                                      <---------TOE2(3)                                                                                      <---------YAB1                                                                                    <---------ICU4                                                                                   <---------ATHB51                                                                                   <---------ATHB12                <----------DOF2                                       <---------At4g35610   ---------      <----------DOF2                                                 --------->At4g35610   <-------- -------At4g35610                                                     --------->ZAT2--------->YAB1 ->ATHB12  ---------->ID1        --------->YAB1             --------->TOE2(3)      --------->ICU4---- ------>At4g35610               <---------YAB1           ----------->RAV1(1)     --------->WOX13(1)   agctggttcttttgttctcttttagacacatcttataatgaaatctaaaatgtaaggggcaacataaaaatcagctcaaatagcaattatggttacagaa  14103800                                                                                    <-----------ARR10                                                                                    --------->GLK1(2)                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                <-----------------AGL2          ------------------------>ANAC81                                       ----------------->AGL1          --------->DAG2                                                --------->YAB1        ---------->DOF2      --------->LBD16                            <---------ICU4 >HSFB2a(2)                 --------->ANAC46                   --------------->AtSPL8 -HSFB2a(2)----------->GT1 <---------LBD16      --------->CCA1(2)      --------->ICU4 ------->GT1    --------->ICU4            --------->AtLEC2     --------------->AtSPL3   gataaaaaaaaaaaggtaaaaatgaagaacacggagaaatcgcaatgcagataagagaagagagactcgtaccattatcacggccaaatctggtctgatt  14103900              --------->LBD16             --------->LBD16                                         <---------At4g35610        -----            --------->HSFB2a(2)                                      <---------ZAT2        <------ZmHOX2a(2)           ------>ZmHOX2a(2)                                         ----------->RAV1(2)  ------->TEIL         --------->ARR11(3) --------->MYB52(1)                       --------->ZAT2       <---------ARR14(2) <---------HSFC1(1)    <---------GLK1(1)                             --------->At4g35610  --------->ARR14(2) =================HOX2a_HOX2a  ------->GAMYB                      <---------ATHB12--------->ANAC58 --------->HSFC1(1)    --------->GLK1(1)                        --------->WOX13(1)--------->ANAC46 ------>ZmHOX2a(1)---------->DOF2                            --------->ANAC58     --------->ANAC58 --------->HSFB2a(2)  --------->ARR11(3)               --------->LBD16            <---------ALFIN1 <---------HSFB2a(2)  <---------ARR11(3)--------->TOE2(3)    --------->ANAC58<-----------GT1------>ZmHOX2a(2)   ttcctagaaatgatcccgaataaagatttccaacgggagaaacattagaaaaaatccctgagaacccaatcagctggtgtttccacaccatggatccaaa  14104000                                                      ------>ZmHOX2a(2)                                              --------->RVE1(1)             --------->ANAC46                <---------ARR11(3)      --------->LBD16                -    --------->WOX13(1)                       --------->GLK1(2)<---------YAB1   --------->ZAT6   <----   ---------->DOF2                           --------->ARR11(3)    <---------LBD16        --------->ANAC55(2) ---->MYB46(3)                              <---------GLK1(2) ----------->TBP <---------TOE2(3)<-----   caccataaatcaaacacaaaacgcttctctctctctactagcttcaaaatctctgatcgacgttataaatgcggaagattaagactacattcacgtttta  14104100                                                                                     <---------ARR14(2)                                                                                   ----------->ARR10                                                                              <---------ZAT2                                                                              --------->At4g35610                                                                          <------ZmHOX2a(1)       ---    <---------RVE1(1)              --------->TOE2(3)                    --------->LBD16          ----   --------->ARR11(3)              --------->TOE1(3)                  --------->LBD16--------->ARR14(2)   <---------ARR11(3)            <---------ARR11(3)        ------------>CBF---------->DOF2       ---- -------->SPL7      ------>NtERF2--------->ARR11(3)    <---------ANAC58<---------LBD16--------->GLK1(2) -----LBD16        ----------->HVH21                   <---------ANAC58<-----------RAV1(2)       ---- ------GT1         --------->DEAR3(1)             <----------DOF2     <---------LBD16<---------GLK1(2)   cggacgatatttcaaatttctccgacgattacagagaccttaaacccttcggcttttgccttccaatatttccccaggaaagctggagattctcgcagaa  14104200                                     ----------->RAV1(2)                                            -                              --------->ARR14(2)                                                   --                              <---------ARR14(2)                                                   ==                              --------->KAN4(2)                                                ------                             <----------TaMYB80                                               -------                             <---------HSFB2a(1)                                              -------                             --------->HSFB2a(1)                                              <------ --------->ANAC58            --------->KAN4(1)                                                <------ --------->ANAC58            <---------KAN4(1)                                                ------- ------>TOE1(2)             <---------KAN4(2)              <---------ANAC58                <---------ARR14(2) ----->ANAC58               ---------->TaMYB80             --------------------->WRI1  <---------TOE1(2) ----->ANAC58          --------->LBD16 ------>ZmHOX2a(1)   <---------ANAC58<---------CCA1(2) <------- ------->GT1           <---------LBD16 --------->LBD16  <-----------GT1    ---------->ID1  --------->ARR14(2)   cgtaagaaattttctcgcgttttccctcggaatattctctcctggtttttttttgtttttgccttgtttgatgcttcgtctctctctccctcgtttctgg  14104300                                    <-----------HVH21                                 <-----------RAV1(2)                               <-----------HVH21                              ----------->HVH21                              --------->ALFIN1                            <---------ANAC58                            <---------ANAC46 -------->DAG2              <---------ANAC58                                      <---------GLK1(1) -------->DOF2        --------->O2 <---------At4g35610                            --------->GLK1(1) ============================================bZIP_DOF                            <---------ARR14(2) --->LBD16---------->DOF2<---------DEAR3(1)                      ----------->RAV1(2) -->HSFC1(1)          <---------O2--------->MYB59            <-----------GT1     --------->ARR14(2) -------->AGL15       --------->ANAC46                --------->HSFB2a(2)      --------->LBD16 ---HSFC1(1)     --------->GLK1(2)>>>>>>>GRF7      --------->ARR11(3)        <---------LBD16 ---HSFB2a(2)    <---------ARR14(2)--------->TGA1a <---------ARR11(3)      <-----------GT1 -->HSFB2a(2)    --------->ARR14(2)--------->At4g35610<---------HSFB2a(2)--------->YAB1 --LBD16  ===================================bZIP_DOF------>ZmHOX2a(2)  <---------ATHB51   aaaaaggaagagaaaagagaatccacgtaggcgtgtcaggtcagacatttgatgatctcgaaattacccctgcaattataccggatttcagttctaacat  14104400              ----------->GT1          ------>MYB46(1)                                    <------NtERF2          ------>MYB83                                  --------->ALFIN1          --------->ANAC46                             ------->MYC3   ------>ZmHOX2a(1)                                   <-------MYC3   --------->ALFIN1   --------->LBD16                                    --------->O2  <---------ANAC58   <---------HSFB2a(2)                                <---------O2  <---------ANAC46                <   --------->HSFB2a(2)                          <---------YAB1      <---------ANAC58                - <---------LBD16                             --------->ICU4<---------ANAC46           <---------At4g35610 ----------->RAV1(2)                     <------ZmHOX2a(1)<------NtERF2               --------->At4g35610   ttctcctggaccaagccggtttatagtattcgattctaatggaggagatgatgacaacgtggcgcaagttgagtgtgtctatacatggagcagagcattt  14104500  Previous    Next  AGI:  At2g33240.1    Description:  XID (Myosin-like protein XID); motor/ protein binding. similar to XIA (Myosin-like protein XIA), motor/ protein binding [Arabidopsis thaliana] (TAIR:AT1G04600.1); similar to MYA2 (ARABIDOPSIS MYOSIN) [Arabidopsis thaliana] (TAIR:AT5G43900.1); similar to XIH (Myosin-like protein XIH) [Arabidopsis thaliana] (TAIR:AT4G28710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71520.1); similar to myosin XI-2 [Nicotiana benthamiana] (GB:ABJ53197.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40520.1); contains InterPro domain Myosin, N-terminal, SH3-like; (InterPro:IPR004009); contains InterPro domain IQ calmodulin-bindi Range:  from: 14094019    to: 14103991    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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