Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->ZAT2                                               <---------ZAT2                                               --------->At4g35610                                               <---------At4g35610                                       --------->ATHB12                                       --------->YAB1                                      <---------ATHB12                                  --------->ZAT14             ----------->RAV1(1)      <---------DEAR3(2) ------>LBD16                   --------->ANAC46     --------->LBD16        --------->AHL20(2)      - --GLK1(1)                      --------->bZIP60(2) --------->LBD16      --------->TOE2(3)          -   cgagtctcaaaactccaaatagacgaacaaaaacacctcactcattagcagctcccgagtcaaacaacacaatttccataaattttcgtcgattcgaatt  14027900                                                                                               ------                                                                                             --------                            <---------AHL20(2)                                               --------                           <---------AHL20(2)                     <------ZmHOX2a(1)      --------->ANAC46             --------->TOE2(3)                        --------->ANAC58                   --------->ANAC55(1) -------->ANAC58           --------->AHL20(2)         --------->ANAC58                   --------->ANAC58 -------->ANAC58  --------->MYB46(3)                ---------->DOF2                      --------->ANAC58   tcaaggaaatgaaaacatcaacgactcaattaaatcaaacgatttcaaattcagaaaagcatcacagaggaacagcgaaatgtgtgtttatacgcaagga  14028000                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                          ------>NtERF2                             <---------At4g35610                                         --------->DEAR3(1)                             --------->At4g35610       --------->ATHB12<-------GAMYB   <---------ATERF1(1)                  ------>ZmHOX2a(2)         ------>ZmHOX2a(2)         <---------MYB46(3)--------->ATERF1(1)                  ============================HOX2a_HOX2a           <------NtERF2      ------>NtERF2                 =============================HOX2a_HOX2a         <---------DEAR3(1)  --------->ANAC58                 <------ZmHOX2a(2)         <------ZmHOX2a(2)     --------->SPL7       --------->ANAC58                <---------ARR11(3)        <---------ARR14(2)     <---------At4g35610 --------->ATERF1(1)  <---------YAB1--------->ARR11(3)       --------->GLK1(1)       --------->At4g35610<---------ATERF1(1) --->YAB1      <---------GLK1(1)         <---------GLK1(1)      --------->ALFIN1   <---------ARR14(2) ->ANAC58      --------->GLK1(1)       <------ZmHOX2a(1)      <---------ANAC58     --------->ARR14(2) ->ANAC58 ---------->DOF2<-----------HVH21--------->ARR14(2)  <---------ANAC58    <------ZmHOX2a(1)   taagatgaatgagaaagagatctcactggtcagaagagagaggagatcggatagcagcgattgggcgagcggcgattgaagggaggagacgcctcccttc  14028100                                                                   --------->HSFC1(2)                                                                   <---------HSFC1(2)                                                             --------->LBD16                                     ------>ZmHOX2a(2)       ------>NtERF2                                  --------->ATHB12          <---------DEAR3(1) --------->ANAC58               <---------WOX13(1)      --------->ZAT2        ------>ZmHOX2a(2) --------->ANAC58             ==============HOX2a_HOX2a <---------ZAT2       <------ZmHOX2a(2)    <-- <---------ANAC46             <------ZmHOX2a(1)        ------>MYB83<---------HSFB2a(1)          <---- -------->HVH21             <---------TOE2(3)----------->RAV1(1)   --------->HSFB2a(1)         ------ ----->HSFB2a(2)          ---------->DOF2   <----------ID1 <---------LBD16  <---------ARR14(2) ------ ------HSFB2a(2)      --------->ATHB12----------->GT1  ------>MYB46(1)      --------->ARR14(2)-------   gcgacggaaaacagccattgccattgattaaaggattgatcggtaaacaacaaaacctagctccggcgaaatttctcagatcggattatagagagagatt  14028200           --------->ZAT14           <---------ZAT14         <-----------------AGL1    <---------At4g35610    --------->At4g35610                                                     --------->ARR14(2)    --------->CCA1(2)                                                     <---------DEAR3(2) -------HSFB2a(2)                                           *TSS      <---------O2     <-----------GT1 ---TEIL--------->RAP2.6(3)                       --------->ZAT14     <---------bZIP60(1) --->GLK1(2)                                      <---------ZAT14     --------->bZIP60(1) <---------MYB59 --->CCA1(2)                                    --------->ZAT14<-----------HVH21  <----------DOF2   < -->ARR11(1)                       <----------DOF2<---------REM1(2)   --------->O2<---------DAG2    -   cgagagagatgactgcaatgggcaaaatcaagggcttctttatttctcagtctacacagtagttttgtcacgacgtcgtttccactttattaccaaaatt  14028300                                                                                                <----                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            =========                                                                                            ---------                                                                                            <--------                                                                                            ---------        --------->AHL20(2)                                                             --------->WOX13(1)        <---------AHL20(2)                                                           <---------YAB1  --------->LBD16                       <---------DAG2                       ------>ZmHOX2a(1)  <---- --------->LBD16                        <----------DOF2                --------->ARR14(2)<---------ATHB12 ---------LBD16   <------NtERF2  <---------YAB1                  ---------->DOF2 <---------GLK1(2) ---------->RAV1(2)            --------->ZAT6  ------>NtERF2     ====================================   tcccctgaaattaatcgggccgaatagaggctaatactattactttttcggcccatcttataaggcccaaaggtatctcctcagattatcaatcacgtcg  14028400    --------->ANAC55(2)    --------->ANAC46    --------->ANAC58    --------->ANAC55(1)    --------->ANAC58 -------TGA1 -O2--------->O2 >O2<---------O2 -bZIP60(1) >bZIP60(1) -TGA1a                                                                      <---------ANAC58 >TGA1a                                                                  ---------->DOF2 ==========================bZIP_DOF                                     <---------AHL20(2)  <-------- >ANAC46                                                               --------->AHL20(2)   --------- -ANAC55(2)                                                          ------>MYB83           --------- >ANAC55(2)        <-----------GT1                                   ------>MYB46(1)        --------- -------HVH21   <----------DOF2                            <---------ATHB12  <---------ANAC58  ------ =bZIP_DOF  <-----------GT1                       <----------DOF2  <---------MYB59     --------->YAB1   tcatacacgtcttgtttccttttacatttttgagttttgaccatgacttcttctttctccaatctataaccaaattaatgcgagttgtttcataacgcaa  14028500                                                               -------->ATHB1                                                               -------->HAHB4                                                               <---------AHL20(2)                                                               <---------ICU4                                                              --------->ICU4                                                              <---------YAB1                                                              <---------ATHB51                                                            --------->YAB1                                                            <---------ICU4                                                           <---------AHL20(2)                                                           --------->AHL20(2)                                                     ------>MYB46(1)                                                     ------>MYB83                                                    --------->MYB55(1)                         <-----                                                   --------->AtMYB61                           ------                                                   <---------MYB111(2)                         ------      --------->YAB1                               <---------MYB55(2)               --------->AHL20(2)     <---------YAB1    <---------AHL20(2)          <---------MYB46(2)               <---------AHL20(2)   --------->YAB1  --------->AHL20(2)              <---------MYB111(1)             <---------AHL20(2) -ANAC55(2)  --------->YAB1                        --------->MYB46(3)      <---------ALFIN1   <------ >ANAC58 --------->AHL20(2)                        --------->DEAR3(1)   --------->PCF2   <-----------GT1 >ANAC46 <---------AHL20(2) --------->ARR11(3)    --------->MYB46(3)---------->DOF2--------->AHL20(2) >ANAC58<---------YAB1 --------->AHL20(2)       <-----------GT1--------->ATHB12    --------->AHL20(1) ----->RAV1(1)     <---------AHL20(2) ----------->GT1-------->P--------->ATHB51    <---------AHL20(1)   catactcataataaatgaaaattaaaaaaatatcaagagaaggtaacatttcaccaacctattaattattgaaaggcccacttaatttatttttctgtat  14028600                                            --------->TGA2(2)                                           <-----------TGA1                                          --------->ANAC58                                          --------->ANAC55(2)                                          --------->TGA2(1)                                          <---------ANAC55(2)                                          --------->bZIP60(1)                                          <---------TGA2(1)                                          <---------ANAC58                                          --------->ANAC58                                          <---------ANAC58                                  <---------ICU4                         <---------GLK1(2)<---------bZIP60(1)                     <------------CBF           <---------ARR11(3)    --------->ICU4             <-------TEIL     ----------->GT1 ----ARR14(2)         --------->YAB1   <---------MYB52(1)<---------ANAC58 --------->YAB1         ---- --->ARR14(2)     --------->AHL20(2) <---------ICU4      <---------ANAC58<---------ATHB12        <--- ->TEIL  ----------->ARR10       <---------YAB1         <-------TEIL ------------>CBF      <---------ZAT6 ---CCA1(2)--------->ARR11(3)  --------->YAB1    <---------AHL20(2)  ------>ZmHOX2a(2)   <---------ANAC46   ctgtaaacaataagatactattaaacagaattgtcatcatcgttacgtcatattaatgtgcgttcatttgatccaatgagagtaaattgctgagtgttga  14028700                                                                                   <-----------GT1                                                                           ------->PIF5                                                                           <-------MYC4                                                                           ------->MYC3                                                                           <-------MYC3                                                                           ------->MYC4                                     <---------WRKY12                      <-------PIF5                                     <---------WRKY38(1)                   ------->MYC2                                  ------->GAMYB                            <-------MYC2                               <-----------GT1                            <---------TGA1a           <---------------AGL15  ==================================================MYC_MYB           --------------->AGL15 --------->ZAT6                           --------->PIF3(3)     <-----------RAV1(1)      <-----------GT1                             --------->TGA1a  ------>ZmHOX2a(1)          <---------AHL20(2)                           <---------PIF3(3) ----->GLK1(1)              --------->YAB1            <-----------TBP     --------->O2 ------GLK1(1)         ------------>CBF  --------->YAB1                   <---------O2              -   tttcctcttgttgctaaattttgaagccaattttaacagtcaactataactcccagttatatagtcagagatgtccacgtggaatttacttcatgaacaa  14028800  Previous    Next  AGI:  At2g33040.1    Description:  ATP synthase gamma chain, mitochondrial (ATPC). Identical to ATP synthase subunit gamma, mitochondrial precursor (ATPC) [Arabidopsis Thaliana] (GB:Q96250); similar to ATPC1 (ATP synthase gamma chain 1) [Arabidopsis thaliana] (TAIR:AT4G04640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64434.1); contains InterPro domain ATPase, F1 complex, gamma subunit; (InterPro:IPR000131) Range:  from: 14025767    to: 14028260    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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