Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->At4g35610             <---------At4g35610             <------NtERF2            ----------->RAV1(1)           --------->ANAC46           <---------DEAR3(1)          <---------LBD16                  ------>NtERF2      --------->TOE1(2)     --------->At4g35610                         <-----------GT1    <------MYB46(1)      --------->TOE2(2)     <---------At4g35610                --------->HSFB2a(2)         <------MYB83     ----------->RAV1(2)   --------->ARR14(2)               <----------DOF2   <---------DAG2     ===================RAV<---------ARR14(2)----------->RAV1(1)  <---------GLK1(2)      <--------P -----ICU4--------->LBD16  --------->GLK1(2)--------->MYB46(3) --------->YAB1 <----------DOF2 <------   atcacaaacctgcgcggcagactgatgagcatctgcatcaattgcagccacagtagcaactcctttcagaatattagccactttctcccatgtaggtgtt  13972100                                                                         --------->ANAC58                                                                         --------->ANAC46               --------->ANAC58                                          --------->ANAC58               --------->ANAC58                                      ----------->RAV1(1)               --------->ANAC46                                  --------->TOE1(2)             --------->AtMYB61        --------->AtMYB61         =================RAV          --------->YAB1        --------->ZAT6                  ----------->RAV1(2)         <---------ATHB12     <---------ARR11(3)               --------->GLK1(2)  <----------DOF2         ---------->DOF2                      ------->TEIL -----HVH21  <---------ALFIN1 --------->ARR11(3)              --------->ARR11(3)         --------->ZAT6   agagctttgcaatgaccacaccatggtgcaaagaactctaccaaaacaactccatttgaattaagaacctgcaacaagaaacaagttatcaacactaaca  13972200                                                                                           ----------                                                                                     ------>ZmHOX2a(2)                                                                                    <------ZmHOX2a(2)                                                                                   <---------AGP1                                                                                   --------->AGP1                                                                                   <-----------ARR10                                                                                   <---------ARR11(1)                                               --------->YAB1                      <---------ARR14(2)                                              <---------ATHB12                     --------->ARR14(2)                                             --------->ANAC58                      <---------ARR11(3)                                             --------->ANAC58                     <---------ARR14(1)                                            --------->WOX13(1)                   --------->LBD16                                           --------->MYB46(3)            --------->At4g35610                                      --------->YAB1                     <---------At4g35610                                   --------->WOX13(1)           --------->AHL20(2)<---------CCA1(2)              <---------YAB1     <---------ATHB12              <---------ATHB12<---------LBD16   cagtttcacatcaattctcattttcggtttacccaaacaatcacaacaatcaacaaattggagcaatgaattagcagctaaaccggatctatacagataa  13972300                                                                                                    -                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                        <---------TGA1a                                                                                        =============                                                                                        <---------O2-                                                                                        --------->TGA1a                                                                                        <---------At4g35610                                                                                        --------->At4g35610                                                                                        --------->O2<                                                                                      <-----------RAV1(2)                                                                                   --------->MYB46(3)                                                                             <---------ZAT2       <--                                                                             --------->At4g35610  <--                       ---------->DOF2                      ---------->DOF2  <---------At4g35610 ----                     --------->AtMYB61             --------->TOE1(2)         --------->ZAT2  <-------        --------->GLK1(2)                       <---------ALFIN1           <---------ZAT14-----------       <---------GLK1(2)                        <---------CCA1(2)          --------->ZAT14----------- ->GT1 --------->ARR14(2)            --------->AtLEC2       ======================================bZIP_DOF   accaatagagattctcagaaacaccaaaagatgaaatcgatgcagagcccataccttggacttaaagttagaagcagtgagctgaaccacaggtgacgaa  13972400              --------->ZAT2              <---------ZAT2              --------->ZAT14              --------->At4g35610    ---------->DOF2 --------------->AGL15 <---------------AGL15 ---------------->AGL2 -----ZmHOX2a(2) ------>ARR14(2) ------>ARR11(3)     <---------------------WRI1 ==============bZIP_DOF ---------------->AGL3 -------TEIL  <---------At4g35610                                          <-----------GT1 -------ARR11(3)     <------ZmHOX2a(2)                            --------->YAB1 -------ARR14(2)  XXXXXXXXXXXXXXXXXXXX>MIR832-5P               <---------DOF5.7(2) ----->GLK1(1)<---------ZAT14            ----------->GT1     --------->DOF5.7(2) --ANAC46<---------ZAT14    --------->GLK1(2)               --------->TOE1(3)                 <------ >HVH21  --------->ZAT18  --------->HSFC1(2)                --------->TOE2(3)         <<<<<<<<<TBF1 >TGA1   --------->ZAT14  --------->HSFB2a(1)     --------->ALFIN1----------->GT1 <-----------GT1   gatccataaagagcactgctgagatcgaagaatccaaaacaaatagtaagaagtgtgagcaacgttaatggtgatttatacatttttcttcttccccttt  13972500                                                                  <---------ARR14(2)                                                              --------->At4g35610                                                              <---------At4g35610                                                             ----------->RAV1(1)              <------                                                           --------->At4g35610                <------                                   ======================HOX2a_HOX2a                          <------                    ----------->GT1------>ZmHOX2a(1)--------->TOE2(2)                         <------                    <---------HSFB2a(2)             --------->TOE1(2)                --------->LBD16             <----------DOF2       <----------DOF2<------ZmHOX2a(2)                 <---------ANAC46      <----------DOF2          <-----------GT1   --------->ARR14(2)             --------->ZAT2-------  <----------DOF2   --------->HSFB2a(2)          <---------ARR14(2)            --------->ANAC58 ----DOF2 <-----------GT1     <---------CCA1(2)  *TSS------>ZmHOX2a(1)         --------->ANAC58   ctctctttcttttcactttcttctgtaaaattgtatccttttctctctcgcgatcctgcgaagcagcagatttaagaacacaagctccgtggaattacgt  13972600                  <<<<<<<GRF7                ----------->HVH21            <---------ARR11(3)         --------->YAB1         --------->AHL20(2)        <---------ATHB12        <---------ATHB51    --------->MYB46(3)    --------->At4g35610    ------------>CBF --------->bZIP60(2) ---ANAC46  <---------ARR14(2)                                            ----------->RAV1(2) ---ANAC55(2)   ------>ZmHOX2a(1)                <----------DOF2      --------->ANAC58         <----- ---ANAC58  --------->ARR11(3)     <-----------HVH21                  --------->ANAC58     <-------GAMYB ---ANAC58  --------->ARR14(2)    <---------REM1(1)       --------->TOE1(3)               ----------- -->ANAC55(2) ----------->RAV1(2)--------->ARR11(3)       --------->TOE2(3)         ---------->DOF2   agtctaaccaataatatcctgacacatcagcataagatgtcgcttcgttttcttttgtaacattaactaggcaagcctctggctcagaaagagggttact  13972700            --------->HSFB2a(2)       <---------ANAC58     <-------TEIL       <---------ANAC58  <------MYB83       <------MYB46(1)   <------MYB46(1)                 --------->GLK1(1)       <------MYB83     --------->MYB111(1)          <---------TOE2(3)      <---------MYB46(3)--------->MYB59              --------->ANAC58  <-----------RAV1(1)   --------->MYB46(2)           --------->ANAC58                      --------->ARR11(3) ----YAB1   <---------HSFB2a(2)                 --------->REM1(1)            ---------->DOF2 >GT1<---------ANAC46 <---------MYB52(1)    --------->At4g35610   <-----------GT1    ----------->GT1   atttgtgttgggttccaaaaactagttaggttcaacattttctagttgctgcatcaaggaaatcgaatatacagtttgataaagaaatagaaaaatcatg  13972800                                                   <-----------GT1               --------->GLK1(2)                   <<<<<<<<<GT-1               --------->ARR14(2)             <---------AHL20(2)              ------>ZmHOX2a(1)               <---------ARR14(2)  <------ZmHOX2a(1)                       ---------->ID1              <---------GLK1(2)---------->DOF2--------->AHL20(2)        <----------DOF2   gaacttgatatgttgagaatctgaaaattgtgctaaaggatgtcaagttttattaaccaattcaaaacactgttcttttcctattttgtttcagccattg  13972900                                                                                  --------->DAG2                                                                                 ---------->DOF2                                                                      --------->AHL20(2)                                                                  --------------->AGL15                   ----------->GT1                                <---------------AGL15                   ------------------------>ANAC81               ----------------->AG                  ------------------------>ANAC81                =============================MADS_MADS                  >>>>>>>>>TBF1                                  ----------------->AGL3        <-----                ------------------------>ANAC81               <----------DOF2 <---------------AGL15               ------------------------>ANAC81         --------->ANAC58--------->AHL20(2)     <------           ---------->DOF2                             --------->ANAC46--------->AHL20(1)     -------    --------->ANAC46                 ---------->DOF2   --------->ANAC58<---------AHL20(2)<------NtERF2   ctgtctccgaaaccaaagaagaagaaaaaaaaaaaaaaaaaaagatagaacatttccaagccctctttccaaaaaaattaacaaaaagggcagagagatc  13973000  Previous    Next  AGI:  At2g32920.1    Description:  ATPDIL2-3 (PDI-LIKE 2-3); protein disulfide isomerase. similar to ATPDIL2-2 (PDI-LIKE 2-2), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT1G04980.1); similar to protein disulfide isomerase family [Glycine max] (GB:BAF95902.1); contains InterPro domain Disulphide isomerase; (InterPro:IPR005788); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain (InterPro:IPR013766) Range:  from: 13969395    to: 13972549    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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