Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->AHL20(2)                                            --------->AHL20(1)                                            <---------AHL20(2)              --------->AHL20(2)                                           --------->AHL20(2)            --------->ATHB12          <-----------GT1                  <---------AHL20(2)           --------->ICU4    <---------WOX13(1)         --------->ANAC46                         <---------YAB1  ----------->GT1  --------->ATHB12           ----------->RAV1(1)   ---------->DOF2    --------->YAB1  <---------ANAC46 <---------YAB1       --------->ANAC46 --------->AHL20(2)         <---------YAB1--------->DAG2 --------DOF2       --------->ZAT6   --------->TOE2(3)         --------->ICU4  ---------->DOF2     --   cttttgattgattttctgtttaacacaaaacccacataacataaattaaattgcaaagctaaacaaagattatagtgattaaaaagctacttgtaaatct  13839900                                                                                    ----------->GT1                                                                                   ----------->GT1                                                            <---------DAG2    --------->ATHB12                                                            <----------DOF2   <---------ICU4                                                      --------->HSFC1(2)      -------->HAHB4                                         <----------DOF2 <-----------GT1     <---------YAB1                                      <------ZmHOX2a(1) <-----------GT1      <---------ATHB51              --------->ANAC46      --------->ANAC58  --------->HSFB2a(1)    --------->ICU4            <-----------GT1         --------->ANAC58  <---------HSFC1(2)   --------->YAB1         <-----------ARR10   ---------->DOF2          <---------HSFB2a(1)  <--------HAHB4      --------->YAB1        <---------WRKY38(1)      ------->TEIL<-----------GT1 <---------LBD16  --------->At4g35610       <---------WRKY12      --------->ANAC58        --------->ICU4 ------->At4g35610        <-----------HVH21       --------->ANAC58        <---------YAB1  ---------->DOF2   catcagaagcatatttacccaagaccaaggtcaaagacaaggacttttagccacgaattttcctttttcacttgctataattatgggggaaaaaaagaca  13840000               <---------ANAC58               --------->ANAC55(2)               <---------ANAC58           <---------ANAC46                                --------->ARR14(2)           <---------ANAC58                                <---------ARR14(2)           <---------ANAC58                                --------->GLK1(2)                    <----      --------->MYB111(1)                   --------->HSFB2a(2)                    <------ZmHOX2a(2) ---------->DOF2     <-----------GT1        <---------HSFB2a(2)    <---------MYB52(1)       <--------   gaagaaagtagttgcttacgttttcactggctaatttgatacagttctgaaacaactcgagaatttgctgtttgtcgaaacaaggatcagactccgtctc  13840100                                                     <---------RAP2.3(3)                                           --------->At4g35610                                        <---------ZAT2                                   ------>NtERF2     <---------ANAC58                                  <---------DEAR3(1) <---------RAP2.6(2)                                 --------->RAP2.6(3) <---------ANAC58           <-------PIF5        ----------->HVH21     <---------RAP2.3(2)                      ------>ZmHOX2a(2)           ------->PIF5       --------->SPL7<---------DEAR3(1)<---------ANAC58               <------ZmHOX2a(2)          --------->TGA1a     ------>MYB83 <---------At4g35610<---------ANAC58              <--------       --------->TOE1(2)      ------>MYB46(1)       <---------LBD16                         ---------     --------->PCF2         --------->TOE1(2)  <---------ARR14(2)                       <---------MYB52(1) -------RAV1(2)             --------->TOE2(2)  --------->ARR14(2)  <-----------GT1     --------->TOE2(3) ---HVH21 <---------TGA1a --------->AGP1--------->ZAT2<---------RAP2.3(1)        <-----------HVH21   aggctgagacccacgagcgaaaatgacagacctacgacggctagcagcggctcttgcggctcgagcttgttcccgttccaatctgtcatcgttagatccc  13840200                  ------>NtERF2                --------->ATERF1(1)             <----------DOF2                <------NtERF2                  <---------ANAC58               <---------DEAR3(2)         <---------ZAT2               <---------ATERF1(1)        --------->ZAT2              <---------DEAR3(1)       ---------->DOF2            <-----------HVH21       <-------GAMYB           =================================MYC_MYB  <---------ANAC58           <---------TGA1a         <---------MYB46(3)<---------ANAC58           =======================================bZIP_DOF                        ----------->HVH21           =======================================bZIP_DOF                 <-------TEIL           --------->O2 --------->ARR14(2)--------->At4g35610           <------ZmHOX2a(1)      <----- -ARR11(3) <---------O2 <---------ARR14(2)<---------At4g35610         <---------TOE1(3) <---------ARR14(2) >ARR11(3) --------->TGA1a        <------NtERF2<---------ANAC58       <---------TOE2(3) --------->ARR14(2)   aagaagaagggactcgtcggagcctggattcgagtcgtcgttgaagctggcttttgcttagggtttggagttaaggattcatccatgacagaacttctcc  13840300                                        <---------LBD16                                     <-------TEIL                                  <---------ANAC58                                  <------MYB46(1)                                  <------MYB83                                  <---------ANAC58                                 <---------MYB46(3)       --------->HSFB2a(2)                              <-------GAMYB               --------->LBD16--------->AHL20(1)                             <---------MYB46(3)         ------>ZmHOX2a(2)<---------AHL20(2)      ----                             --------->MYB52(2)        <------ZmHOX2a(2) --------->AHL20(2)      <---                             --------->MYB55(2)       --------->ARR14(2)<---------AHL20(2)       <---                             <-----------RAV1(1)      <---------ARR14(2)--------->AHL20(2)       ----                           <---------MYB52(1)    <---------ANAC46      <---------AHL20(1)   <--------         ------------>CBF<---------ANAC58      <----------DOF2         --------->AHL20(2)   --------- ----LBD16               <---------ANAC58 --------->LBD16 <---------HSFB2a(2)         <---------TOE2(3)   gcttgtataaactcaatgagagaaaatgcgtttgttgggttcaccggagctttgtggatccgagaaaattcaaaataatttgggaattagggattttaat  13840400                                                                                          --------->ANAC55(2)                                                                                          <---------ANAC55(1)                                                                                          --------->O2                                                                                          <---------bZIP60(1)                                                                                          <---------O2                                                                                          --------->TGA1a                                                                                          --------->bZIP60(1)                                                                                          <---------ANAC58                                                                                          <---------bZIP60(2)                                                                                          <---------ANAC55(2)                                                                                          <---------TGA1a                                                                                          <---------ANAC46       <-----------GT1                                          --------->ATHB12          <---------ANAC58      <-----------GT1                                           <---------ICU4            =========== <---------YAB1                                                <---------YAB1            <----------- ----->ARR11(3)                                                --------->ICU4          ----------->HVH21 ------AHL20(2)                                              --------->ANAC55(2)       ----------->TGA1 ------AHL20(1)        <----------DOF2                       <---------ANAC55(2)--------->DAG2     -- ----->AHL20(1)       <---------DAG2                        <-------TEIL  <-----------HVH21     ----- -AHL20(2)        <-----------GT1                    ----------->GT1      --------->LBD16----------->STF1 >AHL20(2)      <----------DOF2                   --------->GLK1(2)      --------->DEAR3(1)     -----   attttgattttccctcttctttacccttttgaatttcagagacactgatgagaatgtgtaaatacatgattacccccgtcgaaaggtgagtgacgtggta  13840500          <---------YAB1    --------->AHL20(2)        --------->YAB1  --------->AHL20(1)     <----------DOF2    <---------AHL20(2)  <---------ALFIN1     <---------ATHB51 <---------ZAT18       --------->ICU4 ===============bZIP_DOF--------->AHL20(2)                         <------------CBF ------------TaNAC69(2)<---------AHL20(2)                         --------->ATHB12 ------->ANAC46        --------->AHL20(2)                       <---------WOX13(1) ---->ARR14(2) --------->TOE2(3)       --------->CCA1(1)  <------ZmHOX2a(1) ---->ZAT14--------->YAB1   <---------AHL20(2)     <-----------HVH21                         --------   tactccactttgatcatcgttagaaataatttaaatatgaaatatccatggccggtcataggactgatagattgggttaagacttggttaagagttaacc  13840600                                        --------------->AGL15                                        <---------------AGL15                  ---------->DOF2                                       <-----------------AGL3                <---------HSFB2a(2)                                  --------------->AtSPL8                 --------->TOE1(2)                            --------->ANAC58           --------->GLK1(2) --------->TOE2(2)                            --------->ANAC58   ------->GAMYB           <-------TEIL          <---------ATHB12------>NtERF2----------------->AGL2       ----------->GT1    --------->CCA1(2) ->MYB52(1)  ------->TEIL--------->DEAR3(1) --------->MYB52(1)     <---------------AtSPL8          --   gatatataacaaatgaattttgtttcgccaacgctaattgtactattaacggaaaacaatcttgtcaaaatggtacatacgagaagcagatagaagaaac  13840700                                                  --------->ARR14(2)                                                  <---------ARR14(2)                                           <----------DOF2                                         <---------ZAT2                          ---------->DOF2                                         --------->ZAT2           <---------GLK1(2)                                   <---------ARR11(3)             <---------ARR14(2)     --------->ANAC58                                   --------->ARR11(3)             --------->ARR14(2)     --------->ANAC58     ----------->GT1         --------->LBD16      --------->GLK1(2)             <---------WRKY38(1) -------->DOF2   <---------At4g35610<------ZmHOX2a(2)   <-----------HVH21       <---------WRKY12   <X   tcaaagaaggtatctagagagctaatacatccgtagagatcacagctttgagaatccatgtcaaaacagatttgtttttcagtcaaagagcaagtctctc  13840800  Previous    Next  AGI:  At2g32590.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO24036.1); contains InterPro domain Barren; (InterPro:IPR008418) Range:  from: 13836497    to: 13840286    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g32600.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO63000.1); contains InterPro domain Zinc finger, C2H2-type matrin; (InterPro:IPR000690); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, U1-type; (InterPro:IPR003604) Range:  from: 13840622    to: 13842740    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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