Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------CCA1(2)               <---------ICU4                                    <---------ICU4                   <---------ALFIN1 --------->DOF2                    ------>ZmHOX2a(1)                <---------At4g35610 -----ARR14(2)               <---------MYB46(3)                    ------->TEIL<---------YAB1 ---->ARR14(2)      >>>>>>>>>>>>>>>>>LFY  ------>ZmHOX2a(1)       <---------ALFIN1 -ICU4      <-------TEIL     <---------DEAR3(2)                  <---------ZAT18--------->ATHB12 ---- >YAB1---------->DOF2       --------------->AtSPL8   <----------DOF2--------->ANAC46          <------   tccaaagacaaagtttcatactgcccattgtctgttcctcattcctatcttgagtctttttttcttctgcacctcatcagtatcattgccaaacaaatca  13834300                                                              <---------HSFB2a(2)                                                              --------->LBD16                                                              --------->HSFB2a(2)                               <------MYB46(1)                ------>ZmHOX2a(1)                               <---------ANAC58              <---------LBD16                               <---------ANAC46              --------->TOE1(2)                     --                               <------MYB83              <---------ZAT2                      ------>ZmHOX2a(1)                               <---------ANAC58          <---------At4g35610               --------->YAB1                            <---------MYB52(1)     <-----------HVH21                     <---------ARR14(2)                          <-----------RAV1(1)     ======================RAV              --------->ARR14(2)  --------->REM1(2)     ----------->RAV1(2)       <-----------RAV1(1)<------ZmHOX2a(1)   --------->GLK1(2) ----->At4g35610     --------->MYB46(3)        ------->TEIL ----------->RAV1(2)         <---------GLK1(2) ---ATHB12         <-----------GT1   <---------AtLEC2 <---------At4g35610       ---------->DOF2  ----   tctgtggagacagaaacattgaaaccacctgttgggtttgcatcaaatgaacatgtcgctgctcctgggaaggattgtatttgaaagtcagaatcctaat  13834400                                                                        --------->GLK1(2)                                                                       <---------ARR14(2)                         <---------YAB1                                <---------GLK1(2)            -                    <---------HSFC1(2)                                 <---------ARR11(3)       -----      <----------ID1--------->HSFC1(2)                 <---------ATHB12--------->ARR14(2)      <----- ------->At4g35610  --------->At4g35610       <---------ALFIN1         --------->ARR11(3)     <------ ----->YAB1   ---------->DOF2         --------->MYB52(2)           ---------->DOF2            -------   cagaagaagagacaaaaaaagaagcttaccattgcagcattagttgctccactctcaataaacccaaactaaagattctcatcttcttgagaagaaagat  13834500                                                                                         ============                                                                                         ------>ZmHOX2a(2)                                                                                        =============HOX2a_HOX2a                                                                                        =============                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)                                                                                       <-----------ARR10                                                                                       --------->ARR14(3)                                                                                       --------->ARR11(3)                                                         <---------ICU4                <---------ARR11(3)                                                        --------->ICU4                <------ZmHOX2a(1)                                                <---------MYB52(1)                   ----------->ARR10      --------->YAB1                            --------->DOF5.7(2)          <----------DOF2  ------>ZmHOX2a(1) --------->ZAT14       ---------->DOF2         --------->TOE1(3)          --------->ANAC58   -------- ----->ZmHOX2a(1)   ----------->RAV1(1)        --------->TOE2(3)          --------->ZAT6<------ZmHOX2a(2) ---->GLK1(2)    --------->AtLEC2            <---------TOE2(3)            --------->ANAC58 ------>ZmHOX2a(1) ----GLK1(2)<-----------GT1                  <---------TOE1(3)          <-----------GT1<---------ARR14(3) ---HSFB2a(1)  <---------ANAC58             --------->MYB52(1)    <---------DAG2   =============HOX2a_HOX2a -->HSFB2a(1)  <---------ANAC58           <---------MYB46(2)      <----------DOF2  <------ZmHOX2a(1)   tcctgtagtcatattttccttgcaacaaagtagcaattccatcgcctaacgttatctaataagtagcacttttgtaacgctataaggaggatcctcctta  13834600                                                <---------GLK1(2)                                               --------->ZAT2                                               --------->At4g35610                                               <---------At4g35610                                               <---------ZAT2                                           <---------ALFIN1                                           --------->ANAC46                   <---------ANAC55(2)    --------->ZAT14      ------>ZmHOX2a(1)--------->DAG2     <---------REM1(2)     --------->TOE2(3)---------->DOF2     <---------ZAT14 ============HOX2a_HOX2a         --------->CCA1(2)  --------->HSFB2a(2)        --------->ARR14(2) ============HOX2a_HOX2a        <---------ARR11(3) <---------LBD16             --------->GLK1(2) ->TOE2(3) --------->YAB1       --------->ARR11(3)<---------LBD16              <---------ARR14(2)   gacacatcctcaatagtcaatacataaagtcatagatatgtctctacacagcttcgggattcaacgtagttagaaaattagtatctgtaagtcaaaaaca  13834700                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                   --------------->AGL15           --                                                                  --------->TOE2(3)                --                   --------->MYB46(3)                             --------->TOE2(2)              <---               --------->ZAT18                            --------->PCF2                    ------->TEIL               <---------ZAT18                      --------->ATHB12                   <-------GAMYB-        ---------->DOF2                            <---------AHL20(2)                  <---------At4g35610   ----------->GT1--------->ANAC46      *TSS <----------DOF2      <---------MYB59      --------->At4g35610   tcaccgagtaaaaagagtccacccattaactcaagtctcaacttacactttgttttattggtcccatacctaagtatagaaaaccattcagttgaatctc  13834800          --------->GLK1(2)    ------>NtERF2 ------>GAMYB ---------ETT(1) -------->ANAC46 -------->At1g77200 -------->DREB2C(2) -------->DEAR3(1) ---------->HVH21                                                          <---------At4g35610 ------->DEAR3(2)                                                        --------->MYB46(3) ------->MYB46(3)                                                      ----------->RAV1(1) ------ALFIN1                                                   ------>ZmHOX2a(1)      <---------GLK1(2) -------->DEAR4(1)--------->ZAT18    <-----------HVH21      <-----------GT1--------->At4g35610-------   caccgacaccataatctgagtgcaagagtccatactctccatcagagagactcaaatccaattctccttactgcaacagctcaaatttggaatcttttgt  13834900                  --------->HSFB2a(2)                 ------>ZmHOX2a(2)                <------ZmHOX2a(2)                --------->GLK1(1)               --------->ARR14(3)               <---------ARR14(3)               --------->ARR11(3)               <---------ARR14(2)               --------->ARR14(2)               <---------ARR11(3)               <---------AGP1              <---------CCA1(2)          <---------ANAC46              <---------ARR14(1)        <------NtERF2           <---------LBD16         --------->TGA1a           <---------At4g35610     --------->ANAC55(1)        <------ZmHOX2a(2)          --------->ANAC58                           --------->ATHB12       <---------ARR11(3)          ================================================MYC_MYB       <---------ARR14(2)          ====================================bZIP_DOF <---------WOX13(1)       --------->ARR14(2)          --------->O2   --------->ALFIN1           <---------YAB1       <--       <-----------HVH21           --------->ANAC58                     ---------->CDC5          ---- ---->GT1  --------->At4g35610     --------->ANAC46         <----------DOF2  --------->ICU4      <---   aaaaacccagatcagcggatctcgaatggcgaagcacacggcagcgttgaaggtgggactagctttactggccctcagcatgattggctacatacttggt  13835000                          --------->TOE1(3)                   <---------ANAC55(2)                   --------->ANAC55(2)                   --------->ANAC58                   --------->ANAC46                  <---------LBD16                 --------->MYB52(1)               --------->AtMYB61              --------->bZIP60(2)              --------->ANAC58              --------->ANAC58                                    --------->ATHB12              --------->At4g35610                                <---------YAB1                    <-            <---------ALFIN1                               <---------ANAC46                   ------>MYB83    <----------DOF2--------->ANAC55(1)   <---------ALFIN1  <---------ANAC58                   ------>MYB46(1) --------->DEAR3(1)--------->ANAC58    <---------At4g35610 <---------ANAC58                 <-------- -------ALFIN1<---------At4g35610     --------->ANAC46 <---------ANAC58                     --------- ----->ETT(2)------>NtERF2--------->TOE2(3)            <---------ANAC58       <---------MYB52(1)   -- ------WRKY38(1)----------->HVH21  <-----------HVH21  --------->ZAT2<---------WOX13(1)   <-----------GT1   ccaccgctctactggcacctcacggaagccttagccgtttcagccacttcttgctctgcttgcgtctgtgattgctcttcgttgcctcttctcaccatcc  13835100                                    --------->ATHB12                                  <---------WOX13(1)                                 <---------ANAC46                                 <---------ANAC58                             ------>ZmHOX2a(2)                           <---------ARR14(2)                           <---------ARR11(3)                   <---------DAG2<---------ANAC58                   <----------DOF2<----------DOF2                  --------------->AGL15                                                          ----                  <---------------AGL15                                                          <---                 ====================================================================================                 ----------------->AG                                                            ----                 <---------------AGL15                                                          <----                 --------------->AGL15                                                          <----        --------->YAB1     --------->ARR11(3)                                               <--------        <-----------GT1    --------->ARR14(2)                                               <--------       <---------ATHB12    <---------AGP1                                                  <---------DAG2       --------->ICU4--------->ATHB12                                                   <-----------GT1 --------ZAT2    <-----------------AGL3       ---------->DOF2    --------->LBD16     --------------->AtSPL8 -ALFIN1<---------ICU4    <---------CCA1(2)<----------DOF2     ----------->RAV1(2)   <---------------AtSPL8 >AtMYB61        ==================================================================================== ------->ZAT2    ----------------->AGL2------>ZmHOX2a(2)       <---------LBD16 <XXXXXXXXXXXXXXXXXXXXMIR417   caactggtaatcactatttccctttattggatcttgcttgatcggctctaaagtttattcattttccctgagacaacgagagcaaatttagtaccttttt  13835200  Previous    Next  AGI:  At2g32580.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G05070.1); similar to unknown [Populus trichocarpa] (GB:ABK95314.1); contains InterPro domain Protein of unknown function DUF1068 (InterPro:IPR010471) Range:  from: 13834740    to: 13836394    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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