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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
YAB1
--------->
ATHB12
<------
<---------
ICU4
<-------
-------->
ATHB1
<---------
DAG2
<---------
AHL20(2)
<----------
DOF2
-------->
HAHB4
<---------
ZAT18
--------->
ATHB51
--------->
ZAT18
--------->
ICU4
--------->
KAN4(2)
<---------
ZAT14
<---------
YAB1
<---------
ICU4
--------->
ZAT14
<---------
YAB1
<---------
ATHB51
--------->
AHL20(2)
<-------
TEIL
-
--------->
MYB52(2)
<---------
MYB52(1)
----------->
GT1
<---------------
AtSPL8
<---------
MYB52(1)
--------->
TOE2(3)
<---------
ANAC58
--------------->
AtSPL8
------
DOF2
----------->
GT1
------------>
ATHB5
<---------
ANAC58
--------------->
AtSPL3
-------------
ANAC81
----------->
GT1
<----------
DOF2
--------->
ICU4
---------->
DOF2
<-------
tttgttagtttttattagttaatataagcgttaattattgttctctcttttgcttaacatgtaaatattcccatggagaaagaagtacactttttgcttt
13684700
--------->
ANAC58
----------->
GT1
<---------------
AGL15
--------->
ANAC55(2)
--------------->
AGL15
<-----------
GT1
<---------
YAB1
<---------
ICU4
--------->
AHL20(2)
<-----------
GT1
<---------
YAB1
----
DOF2
<---------
ICU4
<-----------
GT1
--------->
YAB1
--
ANAC58
--------->
YAB1
>>>>>>>>>>
GT-3b
<---------
YAB1
<---------
GLK1(2)
--------->
DOF2
<---------
YAB1
--------->
ANAC58
<-----------
GT1
<---------
TOE1(3)
--
ANAC58
<----------
DOF2
<---------
ATHB12
--------->
YAB1
<---------
TOE2(3)
gagaaagaataaaaaaactctttattattactaaatcaagaaaaatataaaaccatgctgcatttatcatcattttacatattctatatataaggttctc
13684800
------>
MYB46(1)
------>
MYB83
<----------
DOF2
<---------
MYB59
<---------
DAG2
----------->
GT1
---------->
DOF2
<---------
DAG2
<----------
DOF2
--------->
AHL20(2)
<-----------
GT1
<---------
AHL20(2)
<---------
ARR14(2)
<---------
AHL20(2)
--------->
At4g35610
--------->
AHL20(2)
--------->
ARR14(2)
--------->
MYB52(1)
<-----------
ARR10
--------->
ICU4
<------
taattcgtatacttttgtaaatagagaacaacgaattaaaagaccaaatcgatagcatcttacctttttgttgatatttattaagagaaaaaatcaacac
13684900
--------->
HSFB2a(2)
<<<<<<<<
CAMTA3
<---------
HSFB2a(2)
--------->
ANAC58
<---------
LBD16
--------->
ANAC58
--
--------->
AHL20(2)
--------->
ANAC55(2)
<---------
O2
--
<---------
AHL20(2)
----------->
HVH21
--------->
ANAC46
----
<---------
YAB1
--------->
AHL20(1)
--------->
bZIP60(1)
----------->
HVH21
-----
<---------
YAB1
<---------
AHL20(1)
<---------
bZIP60(1)
--------->
bZIP60(1)
-----
---
ALFIN1
--------->
AHL20(2)
----------->
HVH21
<-----------
GT1
<-----------
GT1
attgttattcttcaagagaataaatttctggagacttagcagttaatgcaatctgacctcacgcgttttttttttttgacctcacgcggttttactaaac
13685000
<---------
CCA1(2)
--------->
ANAC46
<---------
ARR11(3)
<---------
ALFIN1
--------->
DOF5.7(2)
<---------
CCA1(2)
--------->
YAB1
---->
MYB83
--------->
AHL20(2)
--------->
YAB1
---->
MYB46(1)
<---------
AHL20(2)
--------->
YAB1
----->
DEAR3(1)
----------->
TBP
--------->
ATHB12
*
TSS
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
---->
DEAR3(2)
----------->
TBP
--------->
YAB1
------------>
CBF
<---------
YAB1
<-----
---->
MYB46(3)
<---------
MYB52(1)
--------->
ARR11(3)
<-----------
GT1
<---------
ICU4
<--------
cgaccttcgtttacttcccttacctctctatatatatatctctatcttcatttgcatatttc
aattcatttcataatcatacacctctctacatttgtta
13685100
<---------
TOE1(3)
--------->
GLK1(2)
<-----------
RAV1(2)
<-----------
GT1
<---------
ATHB12
<----------
DOF2
--------->
YAB1
------>
MYB46(1)
------
GT1
---------->
DOF2
------>
MYB83
----
-
MYB46(3)
XXXXXXXXXXXXXXXXXXXXX>
MIR173
---------->
DOF2
--------->
YAB1
<---------
ctactttcttctaacttgttttcaaagagaaatcacaatctatctgttccaag
atgagtcaatacagccaaaaccaatcttcag
gtttgtattcttttct
13685200
<---------
ICU4
----------
--------->
ARR14(2)
--------->
YAB1
--------->
YAB1
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
----------->
GT1
<-------
TEIL
<---------
DAG2
--------->
ICU4
<---------
YAB1
<---------
ARR14(2)
<---------------
AtSPL8
----------->
AtSPL8
<---------
GLK1(2)
--------->
YAB1
--------->
YAB1
<----------
DOF2
-
DOF2
--------->
At4g35610
--------->
ARR14(2)
<---------
YAB1
--------------->
AtSPL8
--
tcgtactaatttagcatcagaccatatgtttagtcaatattctcatggttataatcatatttgcagtttcatagtagtaagtacttttttaaatggtaat
13685300
--------->
MYB46(3)
--------->
AtMYB61
<-----------
HVH21
--------->
ABI4(1)
------>
NtERF2
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
--------->
DEAR3(1)
--------->
ORA47(2)
--------->
MYB46(3)
--------->
ERF1
--------->
DEAR3(2)
<---------
ETT(2)
--------->
RAP2.3(1)
--------->
ETT(2)
<------
NtERF2
------>
NtERF2
--------->
ATERF1(1)
--------->
RRTF1(3)
<---------
ATERF1(1)
--------->
RAP2.3(2)
------>
NtERF2
--------->
ANAC46
<---------
PCF2
--------->
RAP2.6(2)
<---------
ABI4(2)
--------->
ATERF1(2)
<-----------
HVH21
---
--------->
RAP2.3(3)
====================================
--------->
RRTF1(2)
--------->
O2
<------
NtERF2
---
<---------
ATERF1(2)
<---------
ANAC58
---
--------->
DEAR3(1)
<---------
O2
------>
NtERF2
----
--------->
RRTF1(1)
<---------
bZIP60(2)
------
--------->
ERF1
<---------
ANAC58
<------
--------->
ORA47(2)
<---------
ANAC55(2)
------>
MYB83
--------->
RAP2.3(1)
<---------
TGA1a
--------->
MYB55(1)
<---------
RAP2.3(1)
--------->
TGA1a
<---------
MYB55(2)
------>
NtERF2
--------->
ANAC55(2)
--------->
ANAC58
<---------
ATERF1(1)
<---------
ANAC55(1)
--------->
ANAC58
--------->
ANAC46
--------->
MYB46(3)
<---------
ATERF1(1)
<------
--------->
ANAC58
--------->
ATERF1(2)
--------->
DEAR3(1)
-------
--------->
ANAC58
<---------
ATERF1(2)
<---------
ALFIN1
------>
MYB46(1)
--------->
SPL7
=====================
MYC_MYB
<------
MYB83
-----
------>
ZmHOX2a(1)
--------->
DEAR3(2)
--------->
DREB2C(2)
---------
----------->
GT1
--------->
TOE1(2)
--------->
MYB52(1)
--------->
DEAR4(2)
--------->
MYB46(3)
->
GT1
--------->
TOE2(2)
-------->
P
<---------
ANAC46
<------
MYB46(1)
------->
ZAT6
<---------
YAB1
<------
ZmHOX2a(1)
<------
NtERF2
<---------
MYB52(1)
<---------
MYB52(1)
--
aagactaatgtgaaatatgaataacttatag
gagcttatcctacgccgccagtgtctaccggcccttacgtggcaccgccaccgctaggttacccaacga
13685400
<-----------
HVH21
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
------>
ANAC58
==
MYC_MYB
--------->
AtLEC2
------>
ANAC58
------>
ANAC46
----->
SPL7
->
GAMYB
--------->
ANAC58
<----------
ID1
<------
MYB83
---
MYB55(2)
------->
GAMYB
<------
MYB46(1)
---
MYB52(2)
--------->
MYB52(1)
---------->
DOF2
--------------->
AGL15
--
-->
MYB46(3)
<------
NtERF2
--------->
TOE2(3)
<---------------
AGL15
--
---->
MYB52(1)
<---------
DEAR3(1)
<---------
GLK1(2)
<----------
DOF2
--
>
MYB52(1)
--------->
ANAC58
--------->
ALFIN1
--------->
ALFIN1
<---------
MYB46(3)
<----------
--------->
RAV1(1)
------>
NtERF2
---------->
DOF2
<---------
WOX13(1)
<--------
P
--------->
HSFB2a(2)
acgacacaagtcatgccacggtggcaacggtggagacaaagtccaagggtgatggattcttaaaaggctg
gttagtcttctttttctagtataaaccagg
13685500
<-------
GAMYB
--------->
MYB52(2)
<-----------
RAV1(1)
--------->
ALFIN1
----------->
GT1
<---------
ANAC46
<------
MYB46(1)
<---------
ANAC58
<------
MYB83
<---------
ANAC46
<--
<-------
MYC3
<---------
ANAC58
<-----
<-------
MYC2
<---------
MYB52(1)
<------
------->
MYC2
<-------
GAMYB
<---------
AHL20(2)
-------
------->
MYC3
<------
MYB46(1)
--------->
AHL20(2)
------>
NtERF2
------->
TEIL
<------
MYB83
<---------
AHL20(2)
<---------
ANAC46
------->
ANAC58
--------->
MYB59
<---------
WOX13(1)
<---------
ANAC58
------->
AtLEC2
<---------
ARR14(2)
--------->
ATHB12
<---------
ANAC58
------->
ANAC58
--------->
ARR14(2)
--------->
ICU4
<---------
RAP2.6(2)
-
GT1
<---------
MYB52(1)
<---------
MYB52(1)
<---------
AtLEC2
<----------
DOF2
<---------
RAP2.6(3)
catgcacgtttggttaactatcaaaccggttcggttatcgtgtgttgcattgattaatttgttttctttcattttttgaatgcag
tcttgcggccatgtg
13685600
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AGI:
At2g32210.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32190.1); similar to unknown [Populus trichocarpa] (GB:ABK92801.1); contains domain PD188784 (PD188784)
Range:
from: 13685063
to: 13685907
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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