Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->AHL20(2)                              <---------AHL20(2)                             --------->AHL20(2)                                              <-------                             <---------AHL20(2)                                              --------                           --------->TOE2(3)                                              --------->AHL20(2)      --------->RVE1(1)  --------->ICU4                           <---------AHL20(2)      <---------AHL20(2)     --------->ARR11(3)<---------ICU4                            <---------AHL20(2)      --------->AHL20(2)     --------->GLK1(2)--------->AHL20(2)                         <---------AHL20(1)      <---------AHL20(2) ---------TOE2(3)  <---------AHL20(2)                        <---------AHL20(2)         <---------YAB1 --------AGL15     --------->AHL20(2)                        --------->AHL20(2)         xxxxxxxxxxxxx ------->AGL15    --------->AHL20(2)                        --------->AHL20(2)       <---------YAB1 -------->AGL3    <---------AHL20(2)         --------->AHL20(2)  --------->AHL20(2)  --------->ICU4<- ---------AGL3 --------->AHL20(2)<---------AHL20(2)      --------->AHL20(2)         --------->TOE2(3) -GT1<---------ARR11(3)<---------AHL20(2)--------->AHL20(2) <---------AHL20(2)     <---------ICU4----   ttaagaaaatctctgtataaattaataaatattaatttatcgataaattaaaacatctataaattaataaaattttgcagtctcaacattattaatttat  13668900      <---------At5g28300     <-----------GT1                    <---------ARR11(3) --AHL20(2)                             --------->ARR11(3)     -------->P ->AHL20(2)             ------->TEIL   <---------CCA1(2)       ------>MYB83 <-----------GT1      <--- xxxxxxxxxx>smallRNA(si3)            --------->AHL20(2)        ------>MYB46(1)                  <---- --------TOE2(3)        --------->ARR14(2)<---------ANAC58     --------->MYB52(1)        ----------->GT1 ------>DOF2            <---------ARR14(2)<---------ANAC58    ------>ZmHOX2a(1)        <------ZmHOX2a(1)   aaaggttttactgtatttgataaacgaatcccttgcgatttatatcttgctgtatttctaaatcctaccgaagttttttttctactgtaggaagtaattc  13669000                                                                >>>>>>>>>MYB98                                                              ------>ZmHOX2a(1)       --------->ARR11(3)                                    <---------MYB59      <---------CCA1(2)                                 <---------HSFB2a(1) ------At5g28300            <---------YAB1              --------->HSFB2a(1)           <------ZmHOX2a(1) -------GT1        --------->YAB1                  --------->AHL20(2)        <---------YAB1  --------   acagttttatatctatggtatttataaattctgaatgtctggcattacaacatttaaaacgttcctaacttactccattttcattgtaggagaaataata  13669100                                                                                         <---------DAG2       --------->ARR11(3)                                                                <----------DOF2      <---------CCA1(2)                                                          <----------ID1    --------->AHL20(2)                                                    --------->TOE2(3)<---------    <---------AHL20(2)                                                   <-----------------AGL1 --------->TOE2(3)                         ----------->GT1               ----------------->AGL1 ->AHL20(2)             <-----------GT1<---------YAB1<-----------------AGL1------>ZmHOX2a(1) --------   taacatttatatctatgttagtaatataacattttcaaattgctattgttatattttcaaatttggacctcatgttccttagtaggccaaactttacccc  13669200                                                              ------>ZmHOX2a(1)                                                             --------->TOE1(3)                                 --------->HSFB2a(2)         --------->TOE2(3)                              <----------DOF2           <---------ARR11(3)                       --------------->AtSPL3           --------->ARR11(3)                       <---------------AtSPL3   --------->TOE2(3)                                  <-                       --------------->AtSPL8  <---------ANAC55(2)                                 <-  --------->YAB1       <---------------AtSPL8  --------->ANAC46                                 ----- <---------YAB1     <---------AHL20(2)         <---------bZIP60(1)              <----------DOF2 <---- --GT1           --------->YAB1  <---------HSFB2a(2)    --------->AHL20(1)---------->DOF2  <---------ANAC46 ->ANAC46 <------ZmHOX2a(1)------->TEIL        --------->ANAC55(2)  --------->MYB52(1)    *TSS-------   attttcatagtaggagaaataataaaacgtacctttcagaaataatcttacgtcaaaatatatccttaaataacagaaaagtctttttagtcttcgtgta  13669300             --------->ATHB12             <---------ICU4            --------->ICU4          --------->YAB1          <---------ICU4         --------->ICU4                            <---------HSFB2a(2)       --------->YAB1                             <------NtERF2       --------->TOE2(3)                        <---------ARR14(2)    --------->ARR14(2)                        <---------HSFB2a(1)    <---------ARR14(2)                        --------->HSFC1(2)   <------ZmHOX2a(1)                  <------NtERF2--------->HSFB2a(2) --------->ANAC46                    ------>NtERF2<---------LBD16 --------TOE1(1)                    --------->ETT(2)--------->LBD16         ------->GAMYB--------->ARR14(2) --------TOE2(1)                    <---------DEAR3(1)<---------GLK1(2)   <---------At4g35610   <---- ---->ARR14(2)        <-----------TGA1--------->ATERF1(1)       ------->GAMYB            <---------ARR14(2) -----ARR14(2)        <-----------HVH21<---------ANAC46        --------->MYB46(3)   --------->MYB52(1) -->REM1(2) <---------YAB1    --------->ICU4  --------->HSFB2a(1)         --------->At4g35610   -----   tacgaggaaccataatgatttcatcgtcagagatgatggcgacggagaaggctccggaatttgtaacagccatggcaactgaaactgaacggatagggaa  13669400                                                                                    <---------ICU4                                                                                   <---------YAB1                                                                                 --------->YAB1                                                                                --------->ICU4                                                                            --------->LBD16                                      <---------ARR14(2)                   <---------HSFB2a(2)                             --------->LBD16                               --------->ANAC46                            --------->ANAC46         --------->ARR11(3)    --------->LBD16                            --------->RAP2.6(2)>>>>>>>>>TBF1               --------->HSFB2a(2)                           XXXXXXXXXXXXXXXXXXXX>MIR167C                   <---------LBD16  <---------CCA1(2)                         --------->ANAC46 ------>ZmHOX2a(1)               --------->HSFB2a(2)                 ----------->GT1      --------->ARR14(2)            <---------ARR11(3)   <---------ANAC58 -----ARR14(2)  <------ZmHOX2a(1)     --------->GLK1(2)             --------->ARR11(3)   <---------ANAC58 ---->GLK1(1)  ----------->GT1    --------->YAB1     <---------ARR11(3)   <---------HSFB2a(2)       <   ttcgagggaagtagatgaggagaaaataagccgcaagaagaatcctgaagaagaagctcttgaagctaaatgtcttcccggaatcatcagtgcttatctc  13669500        ------>ZmHOX2a(1)    --------->ARR14(2)    <---------ARR14(2)  <------MYB83                                                                 --------->TOE2(3)  <------MYB46(1)                                                            <---------ARR11(3)  --------->HSFB2a(1)                               --------->ARR14(2)       --------->ARR11(3)  <---------HSFB2a(1)                              <------NtERF2    -------->ZAP1  --------->HSFC1(2)                             <---------ANAC46 <---------WRKY18(1)  <---------HSFC1(2)                      --------->ARR11(3)     --------->WRKY12 --------->MYB59  ---------->ID1      --------->ZAT6<---------ARR14(2) ----------->GT1 --------->MYB111(1)     <-----------GT1  <---------ARR11(3)     --------->WRKY38(1)               -- --------P    <-----------GT1--------->YAB1     <---------LBD16  ----------->HVH21                 --   aagtaggttcctgttttttcttcgtttttactcataaatagcactatcttggcggattcaagaagacttgaccgagttaaatcttagacttaagttttct  13669600                                 ------->TEIL                              <---------ANAC58                              <---------ANAC58                        <------MYB83                        <------MYB46(1)                <-------GAMYB                 <---------ANAC58<---------ARR11(3)   --------->MYB55(2)                 <---------ANAC58--------->ARR14(2)   --------->MYB46(2)       <-----------GT1<--------P<---------CCA1(2)     --------->MYB52(2)    <----------DOF2  <-------GAMYB                    <---------MYB46(3)           <-------GAMYB --------->ARR11(3) --------->ATHB12          <---------MYB46(3)                  <---------MYB46(3) <---------ARR11(3) <---------MYB46(3)     ----------->GT1     <XXXXXXXXXXXXXXXXXXXXMIR827<----------DOF2 ------->ANAC58  <---------ANAC46<---------ARR14(2) <---------MYB52(1)            --------->MYB52(2) ------->ANAC58 --------->MYB52(2)  <----------DOF2--------->TOE2(3)          <---------TOE2(3)   caagctctttaaccatgttacttggttggattgtgtatctttgtagggtgattcgttagttgagtttgttttggtcatttaagtttgttgtgctttgaac  13669700                <--------ATHB1                --------->ATHB51                <---------ICU4                                                                 ------               <---------YAB1                                                                 -------               <---------ATHB12                                                               <------               <---------ATHB51                                                               <------               --------->ICU4                                                             <---------DAG2             --------->WOX13(1)                                                       ---------->ID1            ------------>ATHB5              --------->ANAC46                   <---------CCA1(1)   --------->ANAC58                       <-----------GT1                      <---------RVE1(1)   --------->ANAC58 <---------AHL20(2)--------->AHL20(2)                      <---------ARR11(3)  --------->DAG2--------->ATHB12    <----------DOF2                           --------->ARR11(3) ---------->DOF2-------->ATHB1      ------>ZmHOX2a(1)                     --------->ALFIN1<----------DOF2   tcaaaaagcaattggcaattattgaattggcccatgtcctttatatacgactcaagtcccttctcatattttggatgtgggatatttcttcgcttttagg  13669800  Previous    Next  AGI:  At2g32160.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64660.1); contains InterPro domain N2227-like (InterPro:IPR012901) Range:  from: 13669290    to: 13673299    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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