Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->KAN4(2)         ---                                                                       <---------KAN4(1)          ---                             --------->MYB52(2)                        --------->HSFB2a(1)       ----                           <---------MYB52(1)                      <---------YAB1          --------->ANAC58        --------->YAB1   <---------ANAC46                 <-----------RAV1(1)              --------->ANAC58 <---------At4g35610     <---------ANAC58       <---------ZAT6<---------MYB46(3)         --------->ANAC46 --------->ZAT2          <---------ANAC58  <---------ANAC58   <------MYB83             <---------ALFIN1 <---------ZAT2         <---------TOE2(3)  <---------ANAC58   <------MYB46(1)<---------ALFIN1    <--- --------->At4g35610    <---------TOE1(3)  <---------ANAC46  <---------AtMYB61        <---------REM1(2)   ccaagctgaatcatcttgagtatgttgacgtttgttttgagagtttcgtagtggtactctgtgttggttttgaatgttcccactggtctacacacgattc  13648600                                                                                            ---------                                                                                            ---------                                                                                            ---------   --------->GLK1(1)                          --------->HSFB2a(2)                           ---------   <---------GLK1(1)                   --------->ANAC46                                    <---------LBD16 ------>LBD16                 --------->GLK1(1)                                          <---------ZAT14 --->ZmHOX2a(1)               <---------GLK1(1)     --------->YAB1            <---------ANAC58 ------ ----->TOE1(2)            ----------->GT1     <---------HSFB2a(2)             <---------ANAC58 <----- ------LBD16       --------------->AGL15      --------->HSFC1(1)         <---------GLK1(2)--------->MYB52(1)   ctgggaactctgtgtccatcgctacgaatgggaaatcgtctacgacttctcgaatcagagccatctctgattcgagattgtcgttccatacttcacggat  13648700                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                     ------>ZmHOX2a(2)                                                                                   <---------ARR11(3)                                                                                   --------->ARR11(3)                                                                                   --------->ARR14(2)                                                                                   <---------AGP1                                                                                   <---------ARR14(2)                                                                                --------->HSFB2a(2) -                                                                              ----------->RAV1(2)   <                                                                             <---------ARR14(2)------                                                                             --------->GLK1(2) ------      --------->ARR14(2)                       <---------YAB1            ============================      <---------ARR14(2)                     --------->YAB1              <------ZmHOX2a(1)     <----- >ANAC58                            --------->YAB1                       ============================ >ANAC58                ----------->HVH21   --------->ICU4               ============================ >ANAC55(2)           ----------->GT1   <---------TOE2(3)   --------->AHL20(2)--------->At4g35610---- >ANAC46    <----------DOF2<---------bZIP60(2) --------->ICU4            ===================HOX2a_HOX2a --->ARR14(2)  <---------HSFB2a(2) --------->ICU4         ----------->GT1============================ ----ARR14(2)  --------->HSFB2a(2) <---------YAB1 <---------YAB1       <---------TOE2(3)     --------   ttgaatcgaatcgtcttttagaaacagtgacatggtgatgataacgatgatgatgaattcgagtaaataagttaaggagcatctggatctagagcaagat  13648800  ------>ZmHOX2a(2) <------ZmHOX2a(2) ---->ARR14(1)   ------>ZmHOX2a(2) ---->CCA1(2)   --------->CCA1(2) --ZmHOX2a(2)   <------ZmHOX2a(2) --->ARR14(2)  --------->AGP1 ----ARR11(3)  <---------ARR14(2) -------->ARR14(2) ---------ARR14(2) --->AGP1      <---------AGP1 --->ARR11(3)  --------->ARR11(3) ==HOX2a_HOX2a <---------ARR11(3)                                                         --------->YAB1 ----ARR14(2)----------->ARR10                                                           <---------ATHB12 ===HOX2a_HOX2a--------->ARR14(2)                                                      --------->WOX13(1) =======HOX2a_HOX2a                                                                --------->WOX13(1) -->ZmHOX2a(2)<---------CCA1(2)            <---------ATHB12                  <-----------GT1 ========HOX2a_HOX2a              --------->ANAC46                     <---------YAB1<---------ATHB12 --->ARR10 <---------At4g35610  --------->ZAT6------->TEIL   --------->AtMYB61  --------->TOE2(3)   ccgatctggtttcatcagatctgcaatagatttaacacaaaacaaatgaatcacttacaaaaaccaaaaccttctgattttacataaatcaatgaaaaca  13648900                                                  --------->HSFB2a(1)                                                 ------->TEIL                                       <                                           --------->ARR14(2)                        --------->HSFB2a(2)                                           <---------ARR14(2)                        <---------HSFB2a(2)                                      <---------ZAT2                               --------->HSFB2a(2)             <-------TEIL             --------->ZAT2                               <---------HSFB2a(2)            --------->CCA1(2)         <---------At4g35610                   <---------ARR11(3) <-----           <---------ARR14(2)         --------->At4g35610                   --------->ARR11(3)<------NtERF2           --------->ARR14(2)       <-----------RAV1(2)                 ---------->DOF2     <--------   gagaaactcgacagatacatagacaaatactaagagagacagctggattcgaaccttgtaatgaagcgaagtaagaaagatgtttctcgagaagacggcg  13649000                                                            ----------->RAV1(1)                                                           --------->DEAR3(1)                              *TSS  <---------YAB1         --------->DEAR4(1)                              <---------MYB46(3)           --------->At1g77200                             <---------AtMYB61             --------->DREB2C(2)   <-----------GT1                          <---------AtMYB61                ----------->HVH21  <---------AHL20(2)                          --------->ALFIN1         ----------->TBP        <---------AHL20(2) ---------MYB46(3)     <---------ARR14(2)          <---------YAB1        <---------AHL20(2) ----ANAC46           <------ZmHOX2a(1)       ----------->GT1        <---------YAB1 -DEAR3(1)         <---------At4g35610      <------ZmHOX2a(1)    <---------GLK1(2) <-----------GT1 <-   agttgttcaggctagggtttcagaggatgtggtggtttattagagaggaggttataaatcaccgacagattattttttatttttttctctctctcggact  13649100                                                                                    --------->TOE2(3)                                                                              --------->ANAC58                                                                              <---------ANAC55(2)                                                                              --------->ANAC58                                                                              --------->ANAC46                      <---------TOE1(3)                                       --------->ANAC55(2)              <----------DOF2       <---------AHL20(2)              <---------MYB52(1)             <-   ---------->DOF2    <---------TOE2(3) <-----------GT1   <-----------GT1     --------->ANAC55(1)---- --------ZAT18<---------DAG2       <---------AHL20(2)    <-----------GT1    <-----------GT1  <-------   gtgcccaaagttgctcctttttttagggtttttgttttttatttacaaacgctgtttttttatcttctcccttgttttatacgcaacgttgatttctttt  13649200           --------->ATHB51                                                             --------->ANAC58       <---------AHL20(2)                                                               --------->ANAC58       <---------YAB1            --------->TOE1(3)                                      --------->ANAC46 ---------DOF2  <---------TOE2(3)<---------MYB59                        <------ZmHOX2a(1) ------>ID1--------->ATHB12      --------->TOE2(3)         ---------->DOF2       <-----------GT1 ---DOF2  <---------YAB1      <-----------GT1            --------->MYB46(3)----------->GT1  <--------   tcttttttttttattattgaggcattttcgattaacctaaaaatcgaaatttttgtctaaccaaagcatgcttaggacagtatatacaattcgcaactgc  13649300                                                                                                 ----                          <---------ICU4             <---------ANAC55(2)            <----------DOF2                         <---------ATHB12            --------->ANAC55(2)     --------->ANAC46    ---- -At4g35610<---------MYB52(1)                ---------->DOF2               --------->ZAT6       -----   tcttagaacctctggtagtagaactaaatcattttcagacaaaaccaaaaagaattcgtaactcatgtatagaacttacacttcatcttttattccaaca  13649400                                                                       --------->MYB46(3)                                                                      XXXXXXXXXXXXXXXXXXXXX>MIR840                                                                      --------->ANAC58                                                                      --------->ANAC58                                                                --------->CCA1(2)                                                                --------->GLK1(1)                                                               <---------ARR14(2)                                                               --------->ARR11(3)                                                               --------->ARR14(2)                                                               <---------ARR11(3)                                                           <---------At4g35610                                                          ----------->RAV1(1)                                                        <------NtERF2 --------->ANAC46                                                       <-----------HVH21 ----->ANAC58                                          <---------RAP2.6(3) ----->ANAC58                      <---------YAB1     --------->RAP2.6(2)  <---------ATHB12 -->GAMYB                     <----------DOF2<-------TEIL<---------WRKY12  ----------->HVH21        -   ggcattagcccaaacatataaaccccaatattcttttacaattgaaatgcatcaagccgtcaacagatatacacccaatgacccaaactgaacaaaaaca  13649500  Previous    Next  AGI:  At2g32070.1    Description:  CCR4-NOT transcription complex protein, putative. similar to CCR4-NOT transcription complex protein, putative [Arabidopsis thaliana] (TAIR:AT1G80780.2); similar to CCR4-NOT transcription complex protein, putative [Arabidopsis thaliana] (TAIR:AT1G80780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45475.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Ribonuclease CAF1; (InterPro:IPR006941) Range:  from: 13647745    to: 13649030    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g32080.1    Description:  PUR ALPHA-1 (purin-rich alpha 1); nucleic acid binding. similar to hypothetical protein [Vitis vinifera] (GB:CAN72395.1); contains InterPro domain PUR-alpha/beta/gamma, DNA/RNA-binding (InterPro:IPR006628) Range:  from: 13649314    to: 13651243    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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