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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                          --------->ATHB12
                                                         <------ZmHOX2a(2)
                                                   <----------DOF2    <-------TEIL
                                             <---------MYB52(2)   <---------TOE1(3)
                       --------->At4g35610 --------->MYB52(1)     <---------TOE2(3) <---------YAB1
               ---------->DOF2 ----------->GT1  ------->TEIL      --------->MYB59  >>>>>>>>>>>>>>>>>LFY
             --------->At4g35610        --------->ANAC58 <---------YAB1           --------->YAB1
  ---------->DOF2    <------ZmHOX2a(1)  --------->ANAC46<---------ARR11(3)     --------->WOX13(1)
-ZmHOX2a(1)  <---------At4g35610        --------->ANAC58--------->ARR11(3)   <<<<<<<<<GATA-1
 
gaggcgaaagtaagacagcaaagaggagcttaagaagaaaaacaagcaacgaagctttagatcattgtttaggttcatttatctatcaccattgtctatt  13452500
                                                                                  --------->MYB52(1)
         <---------At4g35610                                                ---------->DOF2
         --------->At4g35610                                             --------->TOE1(2)
   ------>ZmHOX2a(2)                                                     --------->TOE2(2)
  <---------GLK1(1)                 --------->ATHB12                    --------->YAB1
 <---------ARR11(3)         --------->At4g35610<---------TOE2(3)      --------->MYB52(1)       -----
 --------->ARR11(3)    <---------HSFB2a(2)     --------->DAG2       <---------MYB52(2)       <------
 
tagtgatctctgagctaaatttgattttggaagatgaaatcagtggcaataaggtgagagagattagtggaactaacataagagccaacgatgtttatga  13452600
                                                                         ------>ZmHOX2a(2)
                                                                       <---------ARR14(2)
                                                                       <---------ARR11(3)
                                                                       --------->ARR11(3)
                                                                       --------->ARR14(2)
                                                                       <---------AGP1
                                                                       --------->AGP1
                                                                 <---------AHL20(2)
                                                           --------->ANAC55(2)                    <-
 <-------TEIL                  --------->ARR11(3)          <---------ANAC55(2)         <---------YAB1
--------->CCA1(2)              --------->GLK1(2)       --------->At5g28300   ------->TEIL   --------
----->DOF2      ------>ZmHOX2a(1)         --------->At4g35610   --------->AHL20(2)   --------->YAB1
---YAB1        <---------YAB1  <---------ARR11(3)      <-----------HVH21<------ZmHOX2a(2)   --------
 
aagatacaatttagtattcctattgacaatcgaaaatctaaaatcatctcaatgccacggtcacataataaatagatctgtatgtttctcatcatacact  13452700
                                                                                               -----
                                                                                               <----
                                                                                            --------
                                                                                         -----------
                                                                                        <----------ID1
------>MYB83                                                                         --------->DAG2
------>MYB46(1)                                                                    ---------->DOF2
--------MYB59                                     --------->ANAC46                <---------AHL20(2)
->ZAT6 <---------YAB1                          <---------ARR14(2)                --------->AHL20(2)
->ANAC46                         --------->YAB1--------->ARR14(2)                <---------AHL20(2)
 
accaaatactataatttgttcaaacgtttgaatcaataacaagaacatcaaatccacaactctaaacacttcgaattgacaaaattaaaaggcaacaaag  13452800
                                                                                                 ---
                                                                                                 ---
                                                                                                 ---
                                                                                               -----
                                                                                               <----
                                                                                               -----
                                                                                             -------
                                                                                --------------------
                                                                           --------->At4g35610------
                                                                           <---------At4g35610------
---->At4g35610                                                             <---------ZAT2   ------->GAMYB
-----At4g35610                                                             --------->ZAT2  ---------
-->DOF2    <---------WOX13(1)                    <-----------GT1     <-----------ARR10  --------->MYB46(3)
>RAV1(1) --------->ATHB12                    --------->ICU4   --------->At4g35610<----------DOF2<---
 
ctgaattaagctcgattgatgaagaaatatggaaatggatagtgagtgattcttaccttgtaagcagttgcaattctcagcttcctttctaacaacgccg  13452900
------>ANAC46
------>ANAC58
------>ANAC58
---->MYB52(1)
-----ATERF1(1)                 <---------ANAC46                                            ---------
->NtERF2                       <---------ANAC58                                            <--------
-->RAP2.3(1)              <---------ANAC46                                                --------->AHL20(2)
->WRI1 --------->ATHB12  <------NtERF2 --------->ARR11(3)                             <---------YAB1
----->HVH21             <-----------HVH21                                            --------->AHL20(2)
--->DEAR3(1)           --------->DEAR3(1)            --------->AHL20(2)        <----------DOF2<-----
>DEAR3(1)   <------MYB83<---------RAP2.6(3)<---------ANAC46                <-----------GT1<---------AHL20(2)
---NtERF2   <------MYB46(1)*TSS<---------ANAC58 ----------->GT1      <---------AHL20(2)  --------->AHL20(2)
 
acggaattgatcatttggtttcatagccgtcgtggtgtgagagatgttgtgaagaaaaaaataaaacttgattttttttttcctttgttaaaattaatca  13453000
                    --------->ANAC46
                 <---------ARR14(2)                                                               <-
              <---------ANAC46                                                                  <---
              <---------ANAC55(2)                                         <-----------GT1   <-------
              --------->O2                                     <-----------RAV1(1)          <-------
       ----------------------->TaNAC69(2)                    <----------DOF2                --------
<-----------HVH21--------->ARR14(2)                        <------NtERF2 <-----------GT1   ---------
>WOX13(1)     --------->ANAC58                            <---------DEAR3(2)               <--------
---GT1<-----------RAV1(1)                                <---------DEAR3(1)            <---------AHL20(2)
------GT1     --------->ANAC58                           <---------RAP2.3(3)  *TSS    --------->AHL20(2)
 
ccctatcacatgttgccacgtatacggctctctcaccctcttaaaactctctgaagagagtcggctctgtggttttttatcagtttagatttattttaat  13453100
                              --------->ARR11(3)
                     --------->ANAC58
     <---------AHL20(2)       <---------ARR11(3)
     --------->AHL20(2)   ---------->DOF2                                           <----------DOF2
 <---------YAB1      --------->ANAC58                                              ------>ZmHOX2a(2)
--------YAB1       ------->GAMYB                                                  <---------YAB1
--------GT1       --------->MYB46(3)                                             --------->ARR11(3)
--AHL20(2)       --------->ANAC58                                                <---------ARR11(3)
--YAB1           --------->ANAC58                                            --------->YAB1
->AHL20(2)      --------->WOX13(1)                                       =================HOX2a_HOX2a
>AHL20(2)      <---------WRKY12<------ZmHOX2a(2)           <---------YAB1<------ZmHOX2a(1)
-AHL20(2)      <---------WRKY38(1)                      <---------YAB1  ----------->GT1    <--------
 
tactataatttaagagagtcaaccaaggcaaaagatcaatttctctctcttctctctctacgattattcagagagaggaaacatgatctttgtttctcca  13453200
                                                      <---------RAP2.6(2)
                                                     <-------TEIL                 <----------DOF2
                                                    --------->ARR14(2)          ------>NtERF2
                                            --------->ANAC46                  <---------RAP2.6(2)
                                           <---------LBD16           --------->GLK1(1)
                                         --------->ETT(2) <----------DOF2 --------->At4g35610
                                    <----------DOF2 <---------ARR14(2)   <-----------RAV1(1)
                                  --------->ZAT2    --------->ALFIN1 <---------GLK1(1)         <----
 <---------MYB52(1)               <---------ZAT2   <---------SPL7<---------RAP2.6(2)        <-------
---GT1<---------ZAT14      <---------AtMYB61<---------DEAR3(1)   <---------ANAC46 <---------DAG2<---
 
tccagtttgtttactggttttgtctctggtatggtccagctttgtctacggcgaggttcggctttgtttcggctatctgttgccgctttttgttttttct  13453300
   <---------AHL20(1)
   --------->AHL20(1)        <---------AtMYB61                                                 <----
   <---------AHL20(2)      <---------ANAC46                                                    <----
   --------->AHL20(2)    <---------ZAT14                                                     <------
  --------->AHL20(2)     --------->ZAT14 <---------ARR14(2)                            ------->TEIL
-------RAV1(1)          <---------ZAT6 <XXXXXXXXXXXXXXXXXXXXMIR169H-N               <---------YAB1
----GT1                 <-----------RAV1(1)<-------TEIL                ----------->RAV1(1)<---------YAB1
----GAMYB     <------ZmHOX2a(2) <----------DOF2           --------->ANAC46      <---------WOX13(1)
 
gttgaataaattatgcgatctatattagtgttgtggttttaggcgattcgtttttgcctaaacacaattctctccaacataagattgatgaatatgatgc  13453400
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AGI:  At2g31580.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71745.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62815.1); contains InterPro domain tRNAHis guanylyltransferase (InterPro:IPR007537)
Range:  from: 13447986    to: 13452928    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At2g31585.1   
Description:  other RNA
Range:  from: 13453079    to: 13453806    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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