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Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                 <----------DOF2
   <---------AHL20(2)                            <---------WOX13(1)
  <---------AHL20(2)     <---------ANAC58       <---------ANAC58
  --------->AHL20(2)     <---------ANAC58       <---------ANAC58
-------->AHL20(2)  <---------TOE2(3)            <---------ANAC46              <---------ARR11(3)
---------AHL20(2) <-----------GT1     --------->YAB1                  <---------YAB1
-----YAB1        <-----------GT1     <---------ATHB12   ----------->GT1       --------->ARR11(3)
 
tataaattaatgggacgattttaacatttcttgatgaccaatgacaacattgcttgatgttgtaaacaatgttatgaagaagatgtcaacttcatgtctt  13443200
                              <---------AHL20(2)                                  <---------YAB1
                             <---------AHL20(2)                                   <---------AHL20(2)
                             --------->AHL20(2)                                   --------->AHL20(2)
                         --------->AHL20(2)          --------->At4g35610         --------->AHL20(1)
   --------->RAP2.6(2) <---------ANAC55(2)       ------>ZmHOX2a(2)         --------->YAB1      <----
<---------O2           ----------->GT1         <---------ARR11(3)   --------->AHL20(2)     <--------
--------->ZAT2 <---------AHL20(2)              --------->ARR11(3)<----------DOF2 <---------AHL20(1)
--------->O2  --------->AHL20(2)         <---------YAB1          <---------DAG2  --------->AHL20(2)
 
ctcaggtcgcaattcaattttatatcatgtaaataaatgggattactagtgatctcttctgcaatacactttttaatatcagaatataatttctcatgtt  13443300
                                                                                                  --
                                                                                                  <-
                                                                    <---------HSFB2a(2)         <---
                            --------->AHL20(2)            <---------DAG2                       <----
                     ------>ZmHOX2a(1)                    <----------DOF2                      -----
---TEIL          <-----------GT1                     --------->YAB1 --------->HSFB2a(2)       ------
-TOE1(2) <----------DOF2   <---------ATHB12    <-----------GT1<---------YAB1               ---------
 
catttgaatacactttgttttctccttccaattaagtagtatacaaattttcacaacaatactttatgtttctcgatgtgattcaatgtttatgcaacat  13443400
                                                                              --------->ANAC58
                                                                              --------->ANAC58     -
                                                                  <---------------AGL15           --
                                                                  ----------------->AGL1          --
                                                                  --------------->AGL15           --
                                                                 ----------------->AGL1           <-
   ----------->GT1                                               <-----------------AGL1           --
 <---------YAB1                                                  ----------------->AGL2           --
------->ICU4                                                     <-----------------AG    --------->HSFB2a(2)
--------YAB1                                                     <-----------------AGL3  --------->HSFC1(1)
------ICU4                                                       ----------------->AGL3  <---------HSFC1(1)
-----YAB1                 <---------AHL20(2)                   <---------ARR14(2)        <---------HSFB2a(2)
---->ICU4                --------->AHL20(2)         --------->MYB52(1)      --------->GLK1(1)     <-
--->TOE2(3)              <---------AHL20(2)    <----------ID1  --------->ARR14(2)  <---------ATHB12<
-->RAV1(1)           --------->AHL20(2)      ---------->DOF2   ------->TEIL <---------GLK1(1)     --
 
tattattagtaaaatagatgtccataaattaaatagaagttgaaacttgaaagacaaaccgagacgaatcccaaaatggaaacccaatgtttctcgaaca  13443500
                                                               <---------WOX13(1)
                                                              ----------------------->TaNAC69(2)
                                                              <------------CBF
                                                             --------->ATHB12
           --------->ATHB12                                  --------->YAB1
          <---------ATHB12                                   --------->ATHB51
   <---------AtLEC2                                          <---------ICU4
   <---------ANAC46                   ----------->RAV1(1)    -------->ATHB1
------>MYC3<---------ICU4          <---------ALFIN1          <--------ATHB1
------->O2<---------YAB1           --------->ANAC46          <------------ATHB5
------->ANAC55(1)                 <------NtERF2             <---------ATHB51
------->ANAC58                   --------->TCP23            <---------YAB1          <---------DAG2
--------TGA1a                   --------->PCF5              --------->ICU4          <----------DOF2
------->TGA1a                   --------->PCF2              <---------ATHB12     <---------ALFIN1
------->ANAC46                  <---------TCP15(1)  --------->ARR14(2)          <------NtERF2
--------O2--------->ICU4    <-------MYC3            <---------ARR14(2)         ------>NtERF2
-------MYC3-------->ATHB1   ------->MYC3 ---------->DOF2------------>CBF    <-----------HVH21     <-
------->ANAC58 --------->ATHB12 <---------TCP20  <---------ANAC46          --------->ANAC46  -------
 
cacgtttcatggaatcattgattcgtttgcatatggccccacaacaaagatggcatatatgcaataattgatgcttctacgtcgccacttttctaagaaa  13443600
                                  <---------ATHB12
                                 --------->ANAC46
                     <---------ICU4           --------->ARR14(2)
                   --------->GLK1(2)    ----------->GT1
                  --------->YAB1 --------->ANAC58                                      <---------ANAC46
               --------->YAB1    *TSS  <---------ARR11(3)                              <---------ANAC58
              <---------AHL20(2) --------->ANAC58                              >>>>>>>>>>>>>>>>>LFY
          <-----------TBP     --------->MYB46(3)                               <<<<<<<<<<<<<<<<<LFY
          --------->AHL20(2)--------->ANAC46  <---------ARR14(2)         ----------->GT1
----------GT1--------->AHL20(2)<---------ALFIN1                   --------->YAB1       <---------ANAC58
--->DOF2<----------DOF2    ------>ZmHOX2a(1) <---------CCA1(2) --------->WOX13(1) --------->MYB52(1)
 
gaaaccatctcctttatataataatctttcctcaccactcaatatgttatatccgataacaaaaaacaatcacagagagaaaaaccaatggcttgtattc  13443700
                 ------->PIF5                                                            <---------HSFB2a(2)
                 <-------PIF5                                                            --------->HSFB2a(2)
                ----------->RAV1(2)                                                    =============
              <---------ALFIN1                                                         -------->P  -
             --------->MYB46(3)                       --------->ANAC58              --------->AtMYB61
     <---------ICU4                                   --------->ANAC58              --------->TOE2(3)
     --------->YAB1            <---------ALFIN1 --------->MYB46(3)<---------YAB1    <---------DAG2 -
    <---------ATHB12<---------AtLEC2         <----------ID1     <---------At4g35610 --------->TOE1(3)
 
acatcgaatcatcacatccacctgcatggaagacacactctgtccaagagaacaaaccagcaaatgctgatgatatatcgaacacaaccttaccagaaca  13443800
                  --------->GLK1(2)
           <---------ANAC46                                   --------->ALFIN1
           <---------DEAR3(1)                                <------ZmHOX2a(1)
           <---------TGA1a                                --------->At4g35610
           --------->TGA1a            --------->ATHB12    <------NtERF2
           <---------O2             --------->LBD16       <---------At4g35610
           --------->O2             ------>NtERF2       <-----------RAV1(2)
          <------NtERF2            --------->RAP2.6(2) --------->At4g35610
          --------->ATERF1(1)    --------->PCF5        <------NtERF2
         ------>NtERF2           <---------PCF2        --------->ATERF1(1)
        <---------DEAR3(1)       --------->ATERF1(1)   <---------At4g35610
        ----------->HVH21       <---------PCF5        <---------RAP2.3(1)
        --------->ETT(2)      --------->ALFIN1        ------>NtERF2
       <------NtERF2         ------->MYC3            <---------RAP2.3(3)
       --------->ATERF1(1)   <-------MYC3            <---------RAP2.6(2)
      <---------ATERF1(1)    --------->TOE1(2)       <---------RAP2.3(2)
      ------>NtERF2         --------->O2             --------->ATERF1(2)
     <---------DEAR3(1)     <---------TGA1a          <---------ATERF1(2)
     --------->ALFIN1       <---------O2       <---------ARR14(2)
   <---------MYB46(3)  --------->ANAC58        --------->GLK1(2)               <------NtERF2
   <---------DEAR3(2)  --------->ANAC58       <---------GLK1(2)               --------->LBD16
  <---------DEAR3(1)   --------->ANAC46       <---------ARR14(2)--------->ATERF1(1)            -----
=====================MYC_MYB--------->TGA1a   --------->ARR14(2)<------ZmHOX2a(1)        <------ZmHOX2a(1)
---------->HVH21  <---------ARR14(2)<------NtERF2    <---------DEAR3(1)      --------->DEAR3(1)-----
-------->ANAC46  --------->GLK1(1)<---------DEAR3(1)--------->RAP2.6(3)     <---------LBD16   ------
 
ccacgacggtggcgacgggggaatccaagaaacgtgggccgcgattggagattctggcggcagaggaggaggctatttcgccggagagagtaggaagaag  13443900
                                  <---------ANAC55(2)
                                --------->CCA1(2)                                        ===========
                               --------->ARR14(2)                                        ------>ZmHOX2a(2)
                               <---------ARR14(2)                                      --------->ARR11(3)
                        <----------DOF2                                                <---------ARR11(3)
                       <---------ANAC58                                              <---------YAB1<
     >>>>>>>>>TBF1     <---------ANAC58                  ----------->HVH21         --------->YAB1---
---->At4g35610         <---------ANAC46             <---------YAB1            <---------ANAC46 =====
---->ZAT2         --------->ALFIN1--------->ANAC55(2)--------->ATHB12        <---------LBD16   =====
--->GLK1(2)       <-----------RAV1(1)   <---------MYB46(3)                 ----------->HVH21   <----
 
ctggagaagaagaagagccaagtgttgcttgagggatacgcgttggatgatcaagatgatttgacgagagccaagagtttgacggatgatgatcttgagg  13444000
                         <------MYB46(1)
               <------ZmHOX2a(2)
               --------->CCA1(2)                          ----------->RAV1(1)
              <---------AGP1                    --------->LBD16
   <---------TOE2(3)     <------MYB83         ========================RAV
   <---------TOE1(3)    --------->MYB59       ----------->RAV1(2)
 ---------->DOF2        <---------AtMYB61    ------>ZmHOX2a(2)
==HOX2a_HOX2a --------->AGP1                <------ZmHOX2a(2)
----------DOF2<---------ARR11(3)           --------->ARR11(3)      <---------ANAC58
------>At4g35610------>ZmHOX2a(2)          <---------ARR11(3)      <---------ANAC58
======================HOX2a_HOX2a         <---------GLK1(1)    <----------DOF2       <-----------GT1
=======================HOX2a_HOX2a        --------->GLK1(1) <---------ALFIN1    <----------DOF2
--ZmHOX2a(1)  --------->ARR11(3)    <---------YAB1   <----------DOF2    <-----------HVH21        <--
 
agcttaaaggttgtttagatctagggtttggttttagttacgatgagatccctgagctttgcaacactttgcctgcgttagagctttgttactccatgag  13444100
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AGI:  At2g31560.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G05870.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G05870.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN60580.1); contains InterPro domain Protein of unknown function DUF1685 (InterPro:IPR012881)
Range:  from: 13443634    to: 13445088    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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