Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->ARR14(2)           <---------ARR14(2)                        ----------->RAV1(1)           --------->GLK1(2)               --------->LBD16                 <------ZmHOX2a(1)          --------->WOX13(1)    <-------TEIL  <---------DOF5.7(2)  ----------->RAV1(1) ------>ANAC58           --------->YAB1   <---------ANAC55(2)     --------->MYB46(3)        <-------- ------>ANAC58        --------->WOX13(1)  <---------ANAC46      <-----------GT1             <-------- ------>ANAC46    <---------CCA1(2)      <------NtERF2  --------->TOE2(3) <----------ID1    <--------   aagctatacagccaatctgcctatctatcatacatacattggctccgtaaacgaacaacatcaaattaacaacagtaggacgaagaacaaacttacttgt  13407600                                                                         <---------ALFIN1      --------->LBD16                                                  --------->AtMYB61     <---------HSFC1(1)                                                <---------ALFIN1     --------->HSFC1(1)                                               --------->bZIP60(2)     --------->HSFB2a(2)             --------->MYB52(1)               --------->ANAC46     <---------HSFB2a(2)           <---------MYB52(2)               --------->RAP2.6(2)   ------>MYB46(1)           --------->LBD16                    --------->DAG2   ------>MYB83              <---------HSFB2a(2)        ---------->DOF2----------->RAV1(1) -ANAC58                     ------>ZmHOX2a(1)       --------->ANAC58 --------->MYB46(3) -ANAC46      --------->DAG2 --------->HSFB2a(2)     --------->ANAC58------>NtERF2        <------ZmHOX2a(1) -ANAC58     ---------->DOF2<---------LBD16----------->GT1  --------->YAB1        <----------DOF2   aaaccttccagaagagaaagcgaaggccttcctggaaacaaacagaggtgataacaagtaaagcataaggccaccacacattggctttgagaggaagaaa  13407700                                                                            <---------ATHB12                                                                          --------->WOX13(1)                                                --------->SPL7          <---------ATHB12                                              <---------SPL7      --------->ANAC46                                            <---------------AtSPL3------>MYB46(1)                 <--             ------>NtERF2           ----------->RAV1(1)          --------->AtLEC2                ---            --------->LBD16       --------->ANAC46                --------->ANAC58          ---------            <---------ETT(1)      --------->ANAC58                ------>MYB83--------->WOX13(1)  <--       <---------ICU4             --------->ANAC58                --------->ANAC58          ---------   tggtctccataatcccgacaagatgatcagactcacaagccacagcaacgtactgcattacatttaccaagcaaatcaatcaatctcccaaaaaccctaa  13407800                              ------>MYB83                            <---------MYB59                            --------->MYB46(3)             --------->ARR11(3)             <---------ARR11(3)      ----------->GT1      --------->ANAC58     --------->LBD16       --------->ANAC46                                                         <    <-----------RAV1(2)    --------->ANAC58                                                      ---- <-----------GT1    --------->ANAC46    --------->ANAC58                                        ----- -------ICU4 --------->GLK1(2)----------->RAV1(1)                                               <---- ------>AHL20(2)   <---------HSFB2a(2)  --------->ANAC58                                        ----- >TOE2(3)    <-----------ARR10------>MYB46(1)                                                  <----- -------AHL20(2)   --------->HSFB2a(2)  --------->ANAC46                <---------LBD16      <------- >TOE1(3)   --------->RVE1(1)--------->ANAC46                       <----------DOF2          --------   ttttttccaggtaaaaatcttcgcgaaatacccaacatttcgaagcaatcgaattgaatcacatagatagcttttgggggaaacaaaaaaaaaacaatcc  13407900                                                                           <---------ANAC46                                                                         --------->MYB52(1)    --------->At4g35610                                                 ----------->HVH21 ---------KAN4(2)                                                       ----------->TGA1 ----->LBD16                    <---------LBD16                       --------->At4g35610 ---->ANAC46                   ----------->RAV1(2)                 --------->LBD16  ---------->DOF2 -----ANAC55(2)               --------->GLK1(2)                   <---------HSFB2a(2)          ------ ---->ANAC55(2)               ------->TEIL             ---------->DOF2<---------At4g35610 ---------->DOF2 ----LBD16               ---------->DOF2 --------->ZAT14         <---------LBD16 --------->ANAC58 --ARR14(2)          ---------->DOF2     <---------ZAT14      <----------DOF2    --------->ANAC58 ->GLK1(2)    ----------->GT1--------->ARR11(3)  <------ZmHOX2a(1)--------->HSFB2a(2)--------->DAG2   ggaataagcagagcgattgtgaaaaaagaaagaacctggagagaacagtgaggatgagaaagggctttctggagatgacggagacgaaaagtgaaagaga  13408000                                         <---------MYB52(1)                                     ------>NtERF2                                    ------>NtERF2                                   ----------->HVH21                                  ------>NtERF2                                  <------NtERF2                                  --------->LBD16                                 --------->DEAR3(1)                                 --------->RAP2.6(2)                                <------NtERF2                               <---------ATERF1(1)               <---------ANAC46------>NtERF2            --------->AtMYB61 --------->ANAC46           <---------ZAT2 <---------GLK1(1)           <-----------HVH21           --------->MYB46(3)--------->MYB46(3)   --------->MYB52(1)          ------>NtERF2   --------->GLK1(1)      <---------ALFIN1      --------->ANAC58   --------->ARR14(2) --------->ANAC58      --------->ANAC58   <---------ARR14(2) --------->AtLEC2    ---------->DOF2 --------->ARR14(2)  <-----------HVH21   ------>ZmHOX2a(1)<---------ARR14(2)  <---------RAP2.6(3)                 --------->WRKY18(1) --->CCA1(2)<---------ALFIN1 <---------LBD16--------->ANAC58              <----------ID1  --------->ANAC46   cggtcctaaagccaccagcgcgtagccgatacccgccgcgaccgtcatgccacaccggtctcagagactttcaaataggtcaaactctctctactccaaa  13408100                                                                               <-----------GT1                                                                             <-----------HVH21                                                                          <---------O2                                                                    --------->GLK1(2)                                                       --------->HSFB2a(2)<---------TGA1a                                                       <---------HSFB2a(2)<---------ANAC58                                                       <---------HSFC1(1) <---------bZIP60(2)                                                       --------->HSFC1(1) <---------ANAC58                                                      <---------LBD16    <---------TOE2(3)                                                    --------->ARR14(2) ----------->HVH21                                                    <---------ARR14(2) ----------->TGA1  <-----------                     <---------ATHB12          <-----------RAV1(1) --------->RVE1(1)    --------->ATHB12      --------->ARR11(3)         ---------->DOF2  <---------MYB46(3)<---------ARR11(3)------>ZmHOX2a(1)      <---------ARR11(3)<------------CBF ===========================================bZIP_DOF  ---------->DOF2    ------------>CBF    <----------DOF2         --------->AHL20(2)  --------->TOE2(3)   cgttgaaagaactcttgaatcgaatcaattgacaaaaaagagtctttttttgtggttctggaaccaaaaaaatctgacgtttcacatccttcattgaaaa  13408200                                          --------->HSFC1(2)                                          <---------HSFC1(2)                                          <---------HSFB2a(1)                                          --------->ZAT2                                   <---------ANAC58                                   <---------ANAC58                                 <-----------GT1                             <---------AHL20(2)                             --------->AHL20(2)                             --------->AHL20(1)      --------->AHL20(2)                             <---------AHL20(1)     --------->AHL20(2)                     --------->AHL20(1)   <---------ZAT2                     --------->AHL20(2)   --------->HSFB2a(1)                      <------------CBF                     <---------AHL20(2)  --------->ANAC58                         <---------ICU4          --------->ZAT6 <---------AHL20(1)         <---------AHL20(2)           <---------YAB1    --------->ARR11(3)   --------->AHL20(1)        --------->AHL20(2)          --------->YAB1    <---------ARR11(3)   --------->AHL20(2)     ------>ZmHOX2a(1)          --------->ICU4--------->ANAC46  <---------TOE2(3) --------->AHL20(2)   --------->ANAC58 <-------TEIL   --------->YAB1  --------->ANAC58 -CBF   <-----------GT1  <---------AHL20(2)    <---------MYB59          <---------YAB1   --------->ANAC58   acttaagatttaacaccagaaaattaattaattaattacctgcaagcttcctaattaatatacatcgacaagttttcattatcaacattgcaagcctcga  13408300            <---------ANAC58                                                                        <            <---------ANAC58                                                                       --            <---------ANAC46       --------->YAB1                                             <------     <------------MYB.PH3(1)      <---------ATHB12                                    <---------LBD16  ----------->HVH21  ---------->DOF2       ----------->GT1               ---------->DOF2   <------ZmHOX2a(2)   agctctaacagttttcttggatgcaaagagaaactaatcaaaaaatggtttttttttttgttttactcaaaatacaaaagtcttggacttcggatcatgg  13408400          <---------MYB52(1)                                  <------ZmHOX2a(1)               <------    <---------ANAC58                                      <---------ZAT2                      <------    <---------ANAC58                            <----------DOF2  ---------->DOF2 <---------ZAT14 ----------DOF2<---------GLK1(1)      <----------DOF2     <---------At4g35610    --------->ZAT14 ------->MYB52(2)                    <---------ANAC58     --------->ZAT2  ----------->HVH21   <------ ---YAB1 <-------GAMYB               <---------ANAC58     --------->At4g35610--------->ZAT6  <------NtERF2   ttctttgcttcggttagatttcttcaacttggaagatgggcttgatgtttctttgaatgcagcaggacaaagcttactgacactgcaggcttcgcagcgt  13408500  Previous    Next  AGI:  At2g31440.1    Description:  protein binding. Identical to Gamma-secretase subunit APH1-like [Arabidopsis Thaliana] (GB:Q8L9G7;GB:Q8VZI0;GB:Q9SIC5); similar to unnamed protein product [Vitis vinifera] (GB:CAO64781.1); contains InterPro domain Aph-1; (InterPro:IPR009294) Range:  from: 13406386    to: 13408048    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g31450.1    Description:  endonuclease-related. similar to endonuclease-related [Arabidopsis thaliana] (TAIR:AT1G05900.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO64783.1); contains InterPro domain DNA glycosylase; (InterPro:IPR011257); contains InterPro domain Helix-hairpin-helix DNA-binding, class 1; (InterPro:IPR003583); contains InterPro domain Helix-hairpin-helix motif; (InterPro:IPR000445); contains InterPro domain HhH-GPD; (InterPro:IPR003265); contains InterPro domain Endonuclease III, iron-sulfur binding, conserved site-1; (InterPro:IPR004035); contains InterPro domain Endonuclease III, conserved site-2; (InterPro:IPR004036); contains Inter Range:  from: 13408209    to: 13411254    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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