Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <------ZmHOX2a(1)                                                  <---------CCA1(2)                                                 ------->TEIL                                              --------->ANAC46                                              --------->ANAC55(2)                                              --------->ANAC58                                     --------->ANAC58 <---------HSFB2a(2)                                     --------->ANAC58 --------->HSFB2a(2)             <---------ZAT18     ----------------------->TaNAC69(2)                <---------ATHB12       <---------STY1(2)     <------ZmHOX2a(1)--------->ANAC58                     --------->MYB46(3)       --------->STY1(2)  <-----------RAV1(2) --------->ANAC55(1)    ---------->DOF2            <----  <---------ZAT6      <---------At4g35610     <---------ANAC55(2)  ----------->HVH21--------->YAB1 <---------WOX13(1)   --------->At4g35610  ----------->HVH21     <---------ANAC46--------->WOX13(1)   ctgagtgatagctagtggccattcagcttcaggaatagcaagcctctcacgcatctctagaggagatgtgtgaaagctaagcccaatcaccacaatgctg  13328200                                                                                 --------->DOF5.7(2)                                                                                 <---------MYB52(1)                                                                                --------->TOE2(3)                                                                                --------->TOE1(3)                                                                              <---------TOE1(3)     -                                                                              <---------TOE2(3)    <-                                                                             <---------DOF5.7(2) ----                                                                           --------->DOF5.7(2)   ----                                                                          <----------DOF2      ------                                                                     --------->GLK1(1)    ------->GAMYB             --------->ARR14(2)                                      <---------GLK1(1)   --------->ANAC46             ------->TEIL                                           <---------ARR14(2)   --------->ANAC58             <---------ARR14(2)         --------->TOE1(3)           --------->ARR14(2)   --------->ANAC58            <---------CCA1(2)           --------->TOE2(3)          <------ZmHOX2a(1)   --------->MYB52(1)       <---------MYB52(1)   ---------->DOF2     ----------->GT1  <---------TOE1(2) --------->WOX13(1) -----At4g35610  ------>ZmHOX2a(1)      <----------DOF2         --------->LBD16----------->GT1 <-----   cttctctcccttgtgtatcctaatattcaacaaagctataaactttaacaaggtaacaacaatctccgaggatttgctttaacgttaatcaacgaaacct  13328300     ------->TEIL     --------->GLK1(2)    <---------GLK1(2)  --------->ANAC55(2)  --------->ANAC58                                                            <-----------HVH21  <---------ANAC55(2)                                                      <---------At5g28300  --------->ANAC58                                                        <-----------GT1 -------->YAB1                                                           <---------YAB1 --------ATHB12                                                       <---------YAB1 -->MYB46(1)                                                       --------->GLK1(2) -->MYB83          --------->YAB1           --------->HSFB2a(1)   <---------GLK1(2)      <------ZmHOX2a(1) --->TOE2(3)      <---------ATHB12          <---------HSFB2a(1) ----------->ARR10     <-----------RAV1(2) ----MYB59      --------->WOX13(1)---------->DOF2              <------NtERF2 <---------ZAT6  --------   aatcacgaatctcaaatgcaatcaaaaacaaaattcaaaagttggaacatttcagaaatgaaggcagagattcttattactgtcaattgcaggagaattc  13328400                                              ------->GAMYB                                              <---------ZAT18        --------->HSFB2a(2)                  --------->ANAC58        <---------HSFB2a(2)             --------->ANAC46                                           --  <---------ANAC58        ----------->HVH21  --------->ANAC58                        <---------At4g35610  <---------ANAC58        <---------SPL7--------->ANAC58                             --------->At4g35610 ->GLK1(1)      <----------CDC5         --------->ANAC58                    <---------At4g35610 <----   ttaagcttgtccagaggcgatgagtcgctggacggagaagtctcgcaacgcactctctgtatcaaacctctccttgtcatcttattcatcggaagagtat  13328500                                                                            ----------->RAV1(1)                                                               <-------TEIL --------->MYB52(1)                                                              --------->ARR14(1)                                                              --------->CCA1(2)               -------       <---------ICU4                                         --------->GLK1(2)               -------      <---------ATHB12                                       --------->ARR14(2)               -------   ------>ZmHOX2a(1)                                         <---------ARR14(2)               ------- --------->YAB1                            ----------->HVH21 <---------GLK1(2)               -------- ----->TEIL  <---------HSFB2a(2)           ----------->TGA1  --------->ARR11(1)            --------->ARR14(2) -----YAB1--------->AGP1    <---------GLK1(2)            <-----------------AGL1------->GAMYB --------   gaatcctaatcaggtctagagaagaagacggattatggtgataccatgacgacgatgtctccagattcgggctaagaacaacagaggcattagaaaccgc  13328600   <---------DAG2   <----------DOF2 -->DEAR3(1)        --------->WOX13(1)                 ----------->HVH21 -->RAP2.6(2)     ------------>CBF                 ------>ZmHOX2a(2) -->ANAC46       --------->ANAC58                <---------ARR14(2) >GAMYB          --------->ANAC58        ---------->DOF2                                    <-------- ->DEAR3(2) <---------ZAT14          ---------->DOF2 <---------ANAC46                       <-------- ->MYB46(3) --------->ZAT18      <----------ID1  --------->ARR14(2)   <---------TOE2(3)    <---------   catagctttttgagtttactagcaatctcgagacagagacaaagaaagagggatcgggtgaagagggattttaagaaaatgtaataggcattctcaggtt  13328700              --------->ANAC58              --------->ANAC58              ----------->GT1                                                          ------->TEIL       ----------->GT1         ----------->GT1              <---------DAG2     <---------ARR11(3) -TOE1(2)     ------------------------>ANAC81               <----------DOF2    --------->ARR11(3) -TOE2(2)    --------->DAG2   --------->DAG2                ------>ZmHOX2a(1)  <---------AHL20(1)---- --RAV1(2)  ---------->DOF2  ---------->DOF2      ------->TEIL  ---------->ID1 --------->AHL20(1)<---   tattttgaaatgtaaaaagcaaaaaaaaaaaaaaagtaagaagaaatatttgcatcttggtcctttatcgttttagtagaaaatatttgcatcttggtcc  13328800                                                                                                -----                                                                                              -------                                                   <---------ANAC58                        --------->ALFIN1                                                   <---------ANAC58                      <---------ANAC58                                                   <---------ANAC46                      <---------ANAC46                                   --------->DEAR3(1)--------->ALFIN1                    <---------ANAC58                           ------>ZmHOX2a(1)  <---------DAG2                  --------->WRKY18(1)                           ======================HOX2a_HOX2a                --------->ANAC58 --------                      <---------ARR14(2)      --------->TOE1(3)             --------->ANAC58 <-------                      --------->ARR14(2)  <------ZmHOX2a(2)        <------NtERF2--------->WOX13(1)                     ============================HOX2a_HOX2a     <---------ANAC58 ------------>CBF -->ZmHOX2a(1)       <------ZmHOX2a(1)  <------ZmHOX2a(1)        <---------ANAC46--------->ANAC58 -------DOF2<---------HSFB2a(2)<---------ZAT14--------->TOE2(3)  <---------ANAC58--------->ANAC58   tttctcgtttcagtctcgaaacaggattcctacttcaccgaaggatcaccttaacgtggtgttcttggcgtggaatgcaagtcaagcaattcggtgtggt  13328900                                                                       --------->LBD16                                                             <----------DOF2      <---------ATHB12                                              <------ZmHOX2a(2)        --------->At4g35610                                             --------->ARR11(3)        <---------At4g35610         <-       <---------At4g35610                   <---------ARR11(3)    <---------ARR14(2)            <---     --------->ZAT14                     ---------->DOF2    <---------ANAC58  <---------ZAT14  <----- ---->WRKY18(1)                        ==============HOX2a_HOX2a   --------->ARR14(2)          <----- ---->GT1                           <---------LBD16  ---------->DOF2  <---------ANAC46         <----- ->ALFIN1                     <---------MYB52(1) --------->At4g35610 <---------LBD16      --------->ALFIN1 --AtMYB61            <---------GLK1(2)<------ZmHOX2a(1)    <---------ANAC58  --------->ZAT18<-------   caaacactgagctcttaatcttgagattatccgttatatcaggaaaagatcatctcaaagaggctttcgattccgcagagaccactgatgaagtgttccg  13329000                                                                            ------>ZmHOX2a(1)                                                                            --------->LBD16                                                                          ------>ZmHOX2a(2)                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                        --------->ARR11(3)                                                                        <---------ARR11(3)                                                                        --------->ARR14(3)                                                                        <---------ARR14(3)                                                                   --------->ALFIN1                                                                 --------->At4g35610                                                                 ====================================                                                                 ==========================bZIP_DOF                                                                 <---------TGA1a                                              <---------At4g35610<---------ANAC46                                             <-----------GT1     <---------At4g35610                                        <------MYB46(1)         <---------AtMYB61                                        <------MYB83          --------->ALFIN1                ------- --------MYB46(3)                   --------->STY1(2)        <-----------HVH21             <---------ANAC58 ------MYB52(1)                     --------->ZAT2          --------->At4g35610       <-------TEIL ----ANAC58                         <---------ZAT2          <---------At4g35610   --------->DAG2 ----ANAC58                    --------->MYB52(1)         <-----------RAV1(2)   ---------->DOF2------ ----ANAC46                  --------->ARR11(3)  --------->At4g35610   <------ZmHOX2a(1)<----------DOF2 --------------WRI1  <----------DOF2<---------STY1(2)   <-----------HVH21<------ZmHOX2a(2) <---------ANAC58   tttgttcaaggagatggaattgtctttcgaagataacgagctaggtttatctgctctgtatcaggtgaggtgaggatcctgaaaaaggttctttcttacg  13329100  Previous    Next  AGI:  At2g31250.1    Description:  HEMA3; glutamyl-tRNA reductase. similar to HEMA2, glutamyl-tRNA reductase [Arabidopsis thaliana] (TAIR:AT1G09940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77439.1); contains InterPro domain Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; (InterPro:IPR015895); contains InterPro domain Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; (InterPro:IPR006151); contains InterPro domain Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal; (InterPro:IPR015896); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; Range:  from: 13326698    to: 13328603    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g31260.1    Description:  APG9 (AUTOPHAGY 9). similar to unnamed protein product [Vitis vinifera] (GB:CAO70695.1); similar to autophagy protein 9 [Glycine max] (GB:CAJ30206.1); similar to autophagy protein 9 [Saccharum officinarum] (GB:CAJ30211.1); contains InterPro domain Autophagy protein 99 (InterPro:IPR007241) Range:  from: 13329098    to: 13334477    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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