Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       ---------->ID1                                                   <-----------RAV1(1)                                              <---------AHL20(2)                    <---------ARR11(3)     <---------ARR11(3)                    --------->ARR11(3)     --------->ARR11(3)                    <---------ARR14(3)     <---------AHL20(1)                    --------->ARR14(2)     --------->AHL20(1)                    --------->ARR14(3)   <---------ARR11(3) --------DOF2       <---------ARR14(2)   --------->AHL20(1)         <---------AHL20(2) -------DAG2       --------->RVE1(1)     --------->ARR11(3)        --------->AHL20(2) --ANAC58         ------->TEIL           <---------AHL20(1)       <---------YAB1 --ANAC58      <---------YAB1         --------->AHL20(2)       <---------AHL20(2)  <---------YAB1   <   ctttttcaatgtctaatatgaatatcttgtttcaacaaaaaaaaatattttttttgttgtattagtttattatatggagacacttatgaaaaacttgttg  13276600                                                                      ----------->GT1                                                                    ----------->GT1                                                                    <---------ANAC46                                                              <---------ARR11(3)                                                              --------->ARR11(3)                                                             --------->RVE1(1)          ---------->DOF2           <-------MYC3         --------->AHL20(2)    <----------DOF2          --------->AHL20(2)          <---------AHL20(2) --------->ARR11(3)    --------->AHL20(2)            --------->AHL20(2)                  <-----------GT1 <---------ARR11(3)   --------->AHL20(2)      ---------->DOF2--------->CCA1(1) ----------->GT1 ---------CCA1(2) --------->AHL20(2)------->MYC3     <---------AHL20(2)    ---------->DOF2  <--------   atatatcttttttaaagcaaaaaaataaaaaataaaaacgtggataacaaaagaattttttaaatatctgatgtgaaaaaagagaaaattgtttcttttc  13276700                                            --------->RAP2.6(2)                                            ------->GAMYB                                         <---------ARR14(2)                                      --------->YAB1                                --------->GLK1(2)   <---------ANAC58        --------->ETT(2) --------->DEAR3(1)   <---------ANAC58       <---------HSFB2a(2)  <----------DOF2    --------->AHL20(2)   <---------ANAC46       --------->HSFB2a(2)  --------->TOE2(3)<----------DOF2                 <---- --DOF2               <---------GLK1(2)  --------->ARR14(2)   ------->TEIL    <----------DOF2   -----   aaactgcgtttgaagaattgaacagtttctcgacattctatcaaaaccgccttaattttcgatgaacttttaatacgaggctttgttttgtttattgcag  13276800             <---------DEAR3(2)             ----------->GT1            <---------DEAR3(1)           <------NtERF2           --------->ATERF1(1)          ------>NtERF2         <---------PCF2                                                               --------->At5g28300         --------->TCP20                                                    --------->AHL20(1)     <---------MYB52(1)                                                     --------->AHL20(2)   <---------ZAT6                                <---------ANAC58           <---------AHL20(2)   <-----------RAV1(1)       <---------RAP2.6(3) <---------ANAC46           <---------AHL20(1)  <---- -----At4g35610     <---------AHL20(2)           <---------ANAC58        --------->YAB1       ------- ---->At4g35610    <---------YAB1     <----------ID1   <XXXXXXXXXXXXXXXXXXXXMIR426   ----------->GT1   cagtactgttggggccggtttattaatgggccgtctcaatactacaaattgtcttgtagggactaatttttgaaataataaattacagggtgaataccat  13276900                                    --------->AHL20(2)                                    <---------AHL20(2)                                    <---------AHL20(1)                                    --------->AHL20(1)                                  <---------TOE2(3)                               --------->AHL20(2)                       <---------ARR11(3)                         <---------ANAC55(2)  <---------YAB1--------->ANAC58                   <-------TEIL<---------AHL20(2)           --------->ANAC58   --------->ARR11(3)    ----------->GT1<-----------GT1     --------->ANAC46 -----YAB1     <---------TOE1(3)<---------AHL20(2)  <---------ANAC58    --------->ARR11(3) -------->AGL15<---------TOE2(3)--------->AHL20(2)  <---------ANAC58    <---------GLK1(2)   gaatagataatgaaatgaaggttcattatgtaaattaatattttacttctgatttcgtttcaacgcatcaacaagatttttgtgaaacaaaaacccattt  13277000                                                                   <---------TGA1a                                                                   <---------O2                                                                   ==============================bZIP_DOF                                                                   <---------bZIP60(2)                                                                 ------>NtERF2                                                                ----------->HVH21                                                                <---------DEAR3(1)                                                                --------->DEAR3(1)                                                               <------NtERF2                                                               --------->RAP2.3(1)                                                               --------->ATERF1(1)                                                              <---------ORA47(2)                                                              <---------RAP2.3(1)                                                              <---------ERF1                                                              <---------RRTF1(1)                                                              <---------RAP2.6(1)                                                              <---------ATERF1(1)                                                              ------>NtERF2                                                              <---------DEAR4(2)                                                             <---------RAP2.3(2)                                                             <---------DEAR3(1)                                                             <---------RRTF1(3)                                                             <---------RAP2.3(3)                                                             <---------ANAC46                                                             --------->DEAR3(1)                                                            <---------ABI4(1)                                                           <---------ATERF1(1)                                                          --------->ANAC46               ------>MYB83                               <---------DEAR3(1)       ----------->RAV1(1)             --------->AtMYB61           --------------------->WRI1--------->O2   <----------ID1             <---------MYB59          <----------DOF2    <---------LBD16  <------NtERF2         -----          ------>MYB83          <---------MYB46(3)      <---------ALFIN1<---------ANAC46        -----          ------>MYB46(1)       <---------REM1(1)      --------->MYB46(3)--------->LBD16      -------        --------->AtMYB61    <-----------RAV1(1) ------>ZmHOX2a(1)<------NtERF2   --------->DREB2C(2)   *TSS <---------MYB59  <-------GAMYB=======================================bZIP_DOF ---------->DOF2 --------->YAB1------>MYB46(1)  <-----------RAV1(1) <---------ETT(2)    <---------DEAR3(1) --------->LBD16   ttatcaaaaaccaaaccaaacccatagggttgtgttgttgctgttctgttcctatcgaccacggcggcgacgaggcggagaagaccgacaaagcggagaa  13277100 <---------ZAT2 --------->ZAT2 --------->At4g35610                                       --------->WRKY18(1) <---------At4g35610                             <---------TOE1(3) ---->ANAC58                   ---------->DOF2   <---------TOE2(3) ---->ANAC58          --------->AHL20(2)      <---------AHL20(2) --->DOF2             <---------AHL20(2) <-------TEIL     <-----------HVH21              <-------TEIL   gccagcttcgaaaccctctagcatttattttttaaaagcgaaattcattttaagggttttggtcatggcttcaatctcgacttggttccgatacatggct  13277200                                                                                                -----                                                                                            ---------                                                                                        <-----------GT1                                                                                      <----------DOF2                                                                                     <---------ICU4                                                                                     ------>ZmHOX2a(2)          <---------ARR14(2)               ---------->ID1       <---------GLK1(1)   <------ZmHOX2a(2)          --------->ARR14(2)         <------MYB46(1)      <----------DOF2          --------->ARR11(3)          --------->KAN4(2)          <------MYB83   --------->ZAT2                 <---------ARR11(3) --------->ANAC58                   <---------AtMYB61 <----------DOF2              <---------ARR14(2) --------->ANAC58<---------ALFIN1   --------->MYB59 --------->At4g35610            --------->ARR14(2)   cacaagctcgagtattccctcactctcagtctcaaggtttggtttgtcttcaccagctttctttagatttctcttcatagtctccgatctttacaatctg  13277300                                                     ---------->TaMYB80                                                     --------->GLK1(2)                                                     --------->ARR14(2)                                                     <---------ARR14(2)          <---------HSFB2a(2)                       --------->GLK1(1)          --------->HSFB2a(2)                       <---------GLK1(1)         <---------LBD16                    <----------DOF2                                         <        <---------LBD16                   --------->LBD16                                           -     <<<<<<<<<MYB2                      <---------LBD16                 <---------YAB1            --- ---->LBD16                          --------->GLK1(1)    <---------ANAC46                --------->WOX13(1) >GLK1(2)<---------ANAC46            <---------GLK1(1)<---------HSFB2a(1)               <---------ATHB12   ggaattggttttcgggaactatttgataaatgctcttagaattccggtttaggggaatctgcgtttattgtgttctcattctgcattcgaatcaatctgt  13277400          --------->CCA1(2)         --------->ARR14(2)         <---------ARR14(2)         <---------ARR11(3)         --------->ARR11(3) --------->ATHB12 --------->ATHB51                    ----------->GT1 <---------ICU4                     ----------->GT1 ---------YAB1                <---------YAB1  <----------DOF2              <----------DOF2         <- -------->ICU4   --------->STY1(2) --------->DAG2              ---------->DOF2 <---------YAB1    <--- ------>YAB1     <---------STY1(2)---------->DOF2 <---------TOE2(3)        <---------DAG2 <----------   tcataattgaagatatactagctatctgatttatgaaaaagttaaaaactttgatgttgagaatacaaagagacttactttatatttggattttgctgtt  13277500  Previous    Next  AGI:  At2g31140.1    Description:  serine-type peptidase/ signal peptidase. similar to serine-type peptidase/ signal peptidase [Arabidopsis thaliana] (TAIR:AT1G06200.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ73983.1); similar to OSJNBa0068L06.9 [Oryza sativa (japonica cultivar-group)] (GB:CAE01583.2); contains InterPro domain Peptidase S24, S26A, S26B and S26C (InterPro:IPR015927); contains InterPro domain Peptidase S26A; (InterPro:IPR014037); contains InterPro domain Peptidase S24, S26A and S26B, C-terminal (InterPro:IPR011056) Range:  from: 13277003    to: 13278888    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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